prot_L-elsbetiae_contig1198.1686.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1198.1686.1
Unique Nameprot_L-elsbetiae_contig1198.1686.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length318
Homology
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BLAST of mRNA_L-elsbetiae_contig1198.1686.1 vs. uniprot
Match: D7FNR8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNR8_ECTSI)

HSP 1 Score: 304 bits (778), Expect = 3.650e-99
Identity = 208/336 (61.90%), Postives = 242/336 (72.02%), Query Frame = 0 
Query:    1 MTSPSCLTRRQRSYATAASHNNPHSLDFFSAALVPNHERGALQSSQGGAG--------RSRRRGSPFAALSEAYKPPRAAVFARPRGRDGGEVLGLRSS-NF-AWPKPVEA---LPTDPRHVQRQR-EEAAAAEMEVTSRTKKTVLLPMRKRTDANAVE--SRWVSSXXXXXXXXXXXXXXXXXXXXXXXTAPASPSGHGRSVSWGK---ASVFRFEIDVTQTQSDVYSPDLHAVELAKRLAVIGRDPELRRAASAVENCRRHAASIVRSLTSKQNGGVDGVEDACRVYSWREASFLRETDELVRSIVVGPGEEGVWRLKANYRAARRKMEDACSD 317
            M+SPS LTRRQRSYA+ ASHNNPHSL+ FSAAL+PNHERG LQ+  G  G        R RRRGSPFAALSEAYKP RA VF+RPR RDGGEVLGLRSS +F AWP+P      LP DPRHVQ++R +  A AE+++ +                       RW   XXXXXXXXXXXXXXXXXXXXXXX+       H +SVSW +    SV RF   V  +Q+DVYSPDL AVE+AK LAV  R+PELRRAA  V+ CRRHAA +VRS+TS QNGG+DGVE+ACR+Y WRE +FLRETDELVRSIVV  GE+ VWRLK+++RAARR+MEDA SD
Sbjct:    1 MSSPSYLTRRQRSYASHASHNNPHSLEPFSAALIPNHERGTLQTFPGAGGGXXXXXXPRGRRRGSPFAALSEAYKPARAPVFSRPRRRDGGEVLGLRSSCSFVAWPRPGGGDGLLPADPRHVQQKRPQRQAGAEVQIITXXXXXXXXXXXXXXXXXXXXXLGRWXXXXXXXXXXXXXXXXXXXXXXXXXXSRS-----HRKSVSWPEDVIRSVHRFP--VAASQADVYSPDLQAVEIAKELAVRARNPELRRAALQVDYCRRHAAQVVRSMTSAQNGGLDGVEEACRLYGWREETFLRETDELVRSIVVEGGEKEVWRLKSSFRAARRRMEDAESD 329
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1198.1686.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FNR8_ECTSI3.650e-9961.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1198contigL-elsbetiae_contig1198:7862..8815 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1198.1686.1mRNA_L-elsbetiae_contig1198.1686.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1198 7219..9973 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1198.1686.1 ID=prot_L-elsbetiae_contig1198.1686.1|Name=mRNA_L-elsbetiae_contig1198.1686.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=318bp
MTSPSCLTRRQRSYATAASHNNPHSLDFFSAALVPNHERGALQSSQGGAG
RSRRRGSPFAALSEAYKPPRAAVFARPRGRDGGEVLGLRSSNFAWPKPVE
ALPTDPRHVQRQREEAAAAEMEVTSRTKKTVLLPMRKRTDANAVESRWVS
SSAAAAQDDAVPSAASAAAEEAAATAPASPSGHGRSVSWGKASVFRFEID
VTQTQSDVYSPDLHAVELAKRLAVIGRDPELRRAASAVENCRRHAASIVR
SLTSKQNGGVDGVEDACRVYSWREASFLRETDELVRSIVVGPGEEGVWRL
KANYRAARRKMEDACSD*
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