prot_L-elsbetiae_contig11949.1659.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11949.1659.1
Unique Nameprot_L-elsbetiae_contig11949.1659.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length54
Homology
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BLAST of mRNA_L-elsbetiae_contig11949.1659.1 vs. uniprot
Match: A0A1R3TMQ6_9HYPH (Uncharacterized protein n=1 Tax=Agrobacterium rosae TaxID=1972867 RepID=A0A1R3TMQ6_9HYPH)

HSP 1 Score: 62.4 bits (150), Expect = 1.790e-10
Identity = 24/34 (70.59%), Postives = 29/34 (85.29%), Query Frame = 0 
Query:    1 CALRAWRRPTLPRLETQYHWRWGVSLPSSGWDRV 34
            C L+ W+RPTLPRL+T+YHWRWGVS P S W+RV
Sbjct:  108 CDLQTWQRPTLPRLKTEYHWRWGVSRPCSEWERV 141
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11949.1659.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1R3TMQ6_9HYPH1.790e-1070.59Uncharacterized protein n=1 Tax=Agrobacterium rosa... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11949contigL-elsbetiae_contig11949:68..229 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11949.1659.1mRNA_L-elsbetiae_contig11949.1659.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11949 68..229 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11949.1659.1 ID=prot_L-elsbetiae_contig11949.1659.1|Name=mRNA_L-elsbetiae_contig11949.1659.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=54bp
CALRAWRRPTLPRLETQYHWRWGVSLPSSGWDRVFGSPQWPPGRQSAKIV
NWS*
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