prot_L-elsbetiae_contig11941.1657.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11941.1657.1
Unique Nameprot_L-elsbetiae_contig11941.1657.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length162
Homology
BLAST of mRNA_L-elsbetiae_contig11941.1657.1 vs. uniprot
Match: D8LJX1_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX1_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 8.690e-66
Identity = 102/122 (83.61%), Postives = 108/122 (88.52%), Query Frame = 0
Query:    1 CLENIPASGKRFGLMNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKQKAIQAYKKGLSKLPCNRSSNSSSS---SSNVCPFGARCFYAHLDENGNDVKD-STP 118
            CLENIPA GKRFGL+NCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAK KAIQAYKKGLSKLPC       +S   ++ VCPFG+RCFYAHLDENGNDVKD +TP
Sbjct:  172 CLENIPAKGKRFGLLNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKLKAIQAYKKGLSKLPCKYHKPGKASGGGTTTVCPFGSRCFYAHLDENGNDVKDRATP 293          
BLAST of mRNA_L-elsbetiae_contig11941.1657.1 vs. uniprot
Match: A0A6H5JI27_9PHAE (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI27_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 8.790e-65
Identity = 101/122 (82.79%), Postives = 111/122 (90.98%), Query Frame = 0
Query:    1 CLENIPASGKRFGLMNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKQKAIQAYKKGLSKLPC--NRSSNSSSS-SSNVCPFGARCFYAHLDENGNDVKD-STP 118
            CLENIPA GKRFGL+NCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAK KAIQAYK+GLSKLPC  ++  N+S   ++ VCPFG+RCFYAHLDE+GNDVKD +TP
Sbjct:  174 CLENIPAKGKRFGLLNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKLKAIQAYKQGLSKLPCKYHKPGNASGGGTTTVCPFGSRCFYAHLDEHGNDVKDRATP 295          
BLAST of mRNA_L-elsbetiae_contig11941.1657.1 vs. uniprot
Match: F0WK19_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WK19_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.450e-33
Identity = 63/115 (54.78%), Postives = 76/115 (66.09%), Query Frame = 0
Query:    1 CLENIPASGKRFGLMN-CDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKQKAIQAYKKGLSKLPCNRSSNSSSSSSNVCPFGARCFYAHLDENGNDVK 114
            CL++I  SGKRFGL+  CDH +C+ECL  WR+SK    +++RTCPECR+ SFF+VPS    KG  KQ AI AYK  L K  C        S    CPFG  CFYAH+DENG+DVK
Sbjct:  166 CLDDIVDSGKRFGLLTGCDHCFCMECLGEWRRSKDLDVEVTRTCPECRQPSFFIVPSITFCKGIEKQHAIVAYKHHLGKRNCKYFDGMFGS----CPFGQHCFYAHVDENGHDVK 276          
BLAST of mRNA_L-elsbetiae_contig11941.1657.1 vs. uniprot
Match: A0A024GLX5_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GLX5_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.250e-32
Identity = 62/115 (53.91%), Postives = 75/115 (65.22%), Query Frame = 0
Query:    1 CLENIPASGKRFGLMN-CDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKQKAIQAYKKGLSKLPCNRSSNSSSSSSNVCPFGARCFYAHLDENGNDVK 114
            CL++I  SGKRFGL+  CDH +C ECL  WR+SK    +++RTCPECR+ SFF+VPS    KG  K+ AI+AYK  L K  C        S    CPFG  CFYAHLDE+G DVK
Sbjct:  156 CLDDIVDSGKRFGLLTGCDHCFCTECLCEWRRSKDLDVEVTRTCPECRQPSFFIVPSITFCKGIEKEHAIRAYKHHLGKRKCKYFDGMFGS----CPFGQHCFYAHLDEDGRDVK 266          
BLAST of mRNA_L-elsbetiae_contig11941.1657.1 vs. uniprot
Match: W2MJ97_PHYPR (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2MJ97_PHYPR)

HSP 1 Score: 121 bits (304), Expect = 6.130e-31
Identity = 56/114 (49.12%), Postives = 73/114 (64.04%), Query Frame = 0
Query:    1 CLENIPASGKRFGLMNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKQKAIQAYKKGLSKLPCNRSSNSSSSSSNVCPFGARCFYAHLDENGNDVK 114
            C ++I  SGK FGL++CDH +CL+CLR+WR+SK  + ++ R CP CR  S F+VPS   + G+ KQK I+AYK  L+   C   +    S    CPFG RCFYAH D  G DVK
Sbjct:   91 CFDDIVQSGKHFGLLHCDHCFCLDCLRSWRQSKDMELEVIRACPACRLPSDFIVPSLIFVTGEEKQKVIEAYKSHLALRECKYFNGLFGS----CPFGPRCFYAHRDSEGRDVK 200          
BLAST of mRNA_L-elsbetiae_contig11941.1657.1 vs. uniprot
Match: D0NJD4_PHYIT (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NJD4_PHYIT)

HSP 1 Score: 121 bits (303), Expect = 1.080e-30
Identity = 55/114 (48.25%), Postives = 74/114 (64.91%), Query Frame = 0
Query:    1 CLENIPASGKRFGLMNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKQKAIQAYKKGLSKLPCNRSSNSSSSSSNVCPFGARCFYAHLDENGNDVK 114
            C ++I  SGK FGL++CDH +CL+CLR+WR+SK  + ++ R CP CR  S F+VPS   + G+ K+KA++AYK  L+   C   +    S    CPFG RCFYAH D  G DVK
Sbjct:   97 CFDDIVQSGKHFGLLHCDHCFCLDCLRSWRQSKDMELEVIRACPACRLPSDFIVPSLIFVTGEEKRKAVEAYKSHLALRECKYFNGLFGS----CPFGPRCFYAHRDSEGRDVK 206          
BLAST of mRNA_L-elsbetiae_contig11941.1657.1 vs. uniprot
Match: A0A833T7U2_PHYIN (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T7U2_PHYIN)

HSP 1 Score: 121 bits (303), Expect = 5.550e-30
Identity = 55/114 (48.25%), Postives = 74/114 (64.91%), Query Frame = 0
Query:    1 CLENIPASGKRFGLMNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKQKAIQAYKKGLSKLPCNRSSNSSSSSSNVCPFGARCFYAHLDENGNDVK 114
            C ++I  SGK FGL++CDH +CL+CLR+WR+SK  + ++ R CP CR  S F+VPS   + G+ K+KA++AYK  L+   C   +    S    CPFG RCFYAH D  G DVK
Sbjct:  182 CFDDIVQSGKHFGLLHCDHCFCLDCLRSWRQSKDMELEVIRACPACRLPSDFIVPSLIFVTGEEKRKAVEAYKSHLALRECKYFNGLFGS----CPFGPRCFYAHRDSEGRDVK 291          
BLAST of mRNA_L-elsbetiae_contig11941.1657.1 vs. uniprot
Match: A0A0P1AX59_PLAHL (RING-type E3 ubiquitin transferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AX59_PLAHL)

HSP 1 Score: 120 bits (301), Expect = 1.090e-29
Identity = 56/114 (49.12%), Postives = 71/114 (62.28%), Query Frame = 0
Query:    1 CLENIPASGKRFGLMNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKQKAIQAYKKGLSKLPCNRSSNSSSSSSNVCPFGARCFYAHLDENGNDVK 114
            C ++I  SGK FGL+NCDH +CLECLR+WR+SK  + ++ R CP CR  S F+VPS   + G+ K K  + YK  L+   C   + S  S    CPFG RCFYAH D  G DVK
Sbjct:  181 CFDDIVQSGKHFGLLNCDHCFCLECLRSWRQSKNMELEVIRACPACRLPSDFIVPSLIFVTGEKKLKVTKVYKSHLALRECKYFTGSFGS----CPFGPRCFYAHRDTEGRDVK 290          
BLAST of mRNA_L-elsbetiae_contig11941.1657.1 vs. uniprot
Match: H3GG35_PHYRM (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GG35_PHYRM)

HSP 1 Score: 120 bits (301), Expect = 1.300e-29
Identity = 55/114 (48.25%), Postives = 73/114 (64.04%), Query Frame = 0
Query:    1 CLENIPASGKRFGLMNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKQKAIQAYKKGLSKLPCNRSSNSSSSSSNVCPFGARCFYAHLDENGNDVK 114
            C ++I  SGK FGL++CDH +CL+CLR+WR+SK  + ++ R CP CR  S F+VPS    KG+ K+K ++AYK  L+   C   +    S    CPFG RCFYAH D  G DVK
Sbjct:  192 CFDDIVQSGKHFGLLSCDHCFCLDCLRSWRQSKDMELEVIRACPACRVPSDFIVPSLIFCKGEEKRKVVEAYKSHLALRECKYFNGLFGS----CPFGPRCFYAHRDGEGRDVK 301          
BLAST of mRNA_L-elsbetiae_contig11941.1657.1 vs. uniprot
Match: G4YZV9_PHYSP (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZV9_PHYSP)

HSP 1 Score: 119 bits (299), Expect = 1.440e-29
Identity = 55/114 (48.25%), Postives = 72/114 (63.16%), Query Frame = 0
Query:    1 CLENIPASGKRFGLMNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKQKAIQAYKKGLSKLPCNRSSNSSSSSSNVCPFGARCFYAHLDENGNDVK 114
            C ++I  SGK FGL++CDH +CL+CLR WR+SK  + ++ R CP CR  S F+VPS    KG+ K+K ++AYK  L+   C   +    S    CPFG RCFYAH D  G DVK
Sbjct:  156 CFDDIIQSGKHFGLLSCDHCFCLDCLREWRQSKDMELEVIRACPACRVPSDFIVPSLIFCKGEEKRKVVEAYKSHLALRECKYFNGLFGS----CPFGPRCFYAHRDAEGRDVK 265          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11941.1657.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJX1_ECTSI8.690e-6683.61RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
A0A6H5JI27_9PHAE8.790e-6582.79RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
F0WK19_9STRA2.450e-3354.78RING-type E3 ubiquitin transferase n=1 Tax=Albugo ... [more]
A0A024GLX5_9STRA1.250e-3253.91RING-type E3 ubiquitin transferase n=1 Tax=Albugo ... [more]
W2MJ97_PHYPR6.130e-3149.12RING-type E3 ubiquitin transferase n=1 Tax=Phytoph... [more]
D0NJD4_PHYIT1.080e-3048.25RING-type E3 ubiquitin transferase n=1 Tax=Phytoph... [more]
A0A833T7U2_PHYIN5.550e-3048.25RING-type E3 ubiquitin transferase n=1 Tax=Phytoph... [more]
A0A0P1AX59_PLAHL1.090e-2949.12RING-type E3 ubiquitin transferase n=1 Tax=Plasmop... [more]
H3GG35_PHYRM1.300e-2948.25RING-type E3 ubiquitin transferase n=1 Tax=Phytoph... [more]
G4YZV9_PHYSP1.440e-2948.25RING-type E3 ubiquitin transferase n=1 Tax=Phytoph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018957Zinc finger, C3HC4 RING-typePFAMPF00097zf-C3HC4coord: 14..46
e-value: 7.7E-6
score: 25.7
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..75
e-value: 2.6E-9
score: 38.5
NoneNo IPR availablePANTHERPTHR11224MAKORIN-RELATEDcoord: 1..115
NoneNo IPR availablePANTHERPTHR11224:SF10IP09428P-RELATEDcoord: 1..115
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 1..53
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 17..26
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 75..108
score: 8.512
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 1..47
score: 10.571

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11941contigL-elsbetiae_contig11941:1712..3628 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11941.1657.1mRNA_L-elsbetiae_contig11941.1657.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11941 1712..3630 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11941.1657.1 ID=prot_L-elsbetiae_contig11941.1657.1|Name=mRNA_L-elsbetiae_contig11941.1657.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=162bp
CLENIPASGKRFGLMNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVS
FFLVPSKEHLKGKAKQKAIQAYKKGLSKLPCNRSSNSSSSSSNVCPFGAR
CFYAHLDENGNDVKDSTPPPPPASSRRTCPYLRGGGGSRGGGRSGGGGGG
GAGRDHGYGASG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018957Znf_C3HC4_RING-type
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR000571Znf_CCCH
IPR001841Znf_RING