mRNA_L-elsbetiae_contig11941.1657.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig11941.1657.1 vs. uniprot
Match: D8LJX1_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX1_ECTSI) HSP 1 Score: 215 bits (547), Expect = 8.690e-66 Identity = 102/122 (83.61%), Postives = 108/122 (88.52%), Query Frame = 1 Query: 1 CLENIPASGKRFGLMNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKQKAIQAYKKGLSKLPCNRSSNSSSS---SSNVCPFGARCFYAHLDENGNDVKD-STP 354 CLENIPA GKRFGL+NCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAK KAIQAYKKGLSKLPC +S ++ VCPFG+RCFYAHLDENGNDVKD +TP Sbjct: 172 CLENIPAKGKRFGLLNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKLKAIQAYKKGLSKLPCKYHKPGKASGGGTTTVCPFGSRCFYAHLDENGNDVKDRATP 293
BLAST of mRNA_L-elsbetiae_contig11941.1657.1 vs. uniprot
Match: A0A6H5JI27_9PHAE (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI27_9PHAE) HSP 1 Score: 212 bits (540), Expect = 8.790e-65 Identity = 101/122 (82.79%), Postives = 111/122 (90.98%), Query Frame = 1 Query: 1 CLENIPASGKRFGLMNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKQKAIQAYKKGLSKLPC--NRSSNSSSS-SSNVCPFGARCFYAHLDENGNDVKD-STP 354 CLENIPA GKRFGL+NCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAK KAIQAYK+GLSKLPC ++ N+S ++ VCPFG+RCFYAHLDE+GNDVKD +TP Sbjct: 174 CLENIPAKGKRFGLLNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKLKAIQAYKQGLSKLPCKYHKPGNASGGGTTTVCPFGSRCFYAHLDEHGNDVKDRATP 295
BLAST of mRNA_L-elsbetiae_contig11941.1657.1 vs. uniprot
Match: F0WK19_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WK19_9STRA) HSP 1 Score: 129 bits (324), Expect = 2.450e-33 Identity = 63/115 (54.78%), Postives = 76/115 (66.09%), Query Frame = 1 Query: 1 CLENIPASGKRFGLMN-CDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKQKAIQAYKKGLSKLPCNRSSNSSSSSSNVCPFGARCFYAHLDENGNDVK 342 CL++I SGKRFGL+ CDH +C+ECL WR+SK +++RTCPECR+ SFF+VPS KG KQ AI AYK L K C S CPFG CFYAH+DENG+DVK Sbjct: 166 CLDDIVDSGKRFGLLTGCDHCFCMECLGEWRRSKDLDVEVTRTCPECRQPSFFIVPSITFCKGIEKQHAIVAYKHHLGKRNCKYFDGMFGS----CPFGQHCFYAHVDENGHDVK 276
BLAST of mRNA_L-elsbetiae_contig11941.1657.1 vs. uniprot
Match: A0A024GLX5_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GLX5_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.250e-32 Identity = 62/115 (53.91%), Postives = 75/115 (65.22%), Query Frame = 1 Query: 1 CLENIPASGKRFGLMN-CDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKQKAIQAYKKGLSKLPCNRSSNSSSSSSNVCPFGARCFYAHLDENGNDVK 342 CL++I SGKRFGL+ CDH +C ECL WR+SK +++RTCPECR+ SFF+VPS KG K+ AI+AYK L K C S CPFG CFYAHLDE+G DVK Sbjct: 156 CLDDIVDSGKRFGLLTGCDHCFCTECLCEWRRSKDLDVEVTRTCPECRQPSFFIVPSITFCKGIEKEHAIRAYKHHLGKRKCKYFDGMFGS----CPFGQHCFYAHLDEDGRDVK 266
BLAST of mRNA_L-elsbetiae_contig11941.1657.1 vs. uniprot
Match: W2MJ97_PHYPR (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2MJ97_PHYPR) HSP 1 Score: 121 bits (304), Expect = 6.130e-31 Identity = 56/114 (49.12%), Postives = 73/114 (64.04%), Query Frame = 1 Query: 1 CLENIPASGKRFGLMNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKQKAIQAYKKGLSKLPCNRSSNSSSSSSNVCPFGARCFYAHLDENGNDVK 342 C ++I SGK FGL++CDH +CL+CLR+WR+SK + ++ R CP CR S F+VPS + G+ KQK I+AYK L+ C + S CPFG RCFYAH D G DVK Sbjct: 91 CFDDIVQSGKHFGLLHCDHCFCLDCLRSWRQSKDMELEVIRACPACRLPSDFIVPSLIFVTGEEKQKVIEAYKSHLALRECKYFNGLFGS----CPFGPRCFYAHRDSEGRDVK 200
BLAST of mRNA_L-elsbetiae_contig11941.1657.1 vs. uniprot
Match: D0NJD4_PHYIT (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NJD4_PHYIT) HSP 1 Score: 121 bits (303), Expect = 1.080e-30 Identity = 55/114 (48.25%), Postives = 74/114 (64.91%), Query Frame = 1 Query: 1 CLENIPASGKRFGLMNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKQKAIQAYKKGLSKLPCNRSSNSSSSSSNVCPFGARCFYAHLDENGNDVK 342 C ++I SGK FGL++CDH +CL+CLR+WR+SK + ++ R CP CR S F+VPS + G+ K+KA++AYK L+ C + S CPFG RCFYAH D G DVK Sbjct: 97 CFDDIVQSGKHFGLLHCDHCFCLDCLRSWRQSKDMELEVIRACPACRLPSDFIVPSLIFVTGEEKRKAVEAYKSHLALRECKYFNGLFGS----CPFGPRCFYAHRDSEGRDVK 206
BLAST of mRNA_L-elsbetiae_contig11941.1657.1 vs. uniprot
Match: A0A833T7U2_PHYIN (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833T7U2_PHYIN) HSP 1 Score: 121 bits (303), Expect = 5.550e-30 Identity = 55/114 (48.25%), Postives = 74/114 (64.91%), Query Frame = 1 Query: 1 CLENIPASGKRFGLMNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKQKAIQAYKKGLSKLPCNRSSNSSSSSSNVCPFGARCFYAHLDENGNDVK 342 C ++I SGK FGL++CDH +CL+CLR+WR+SK + ++ R CP CR S F+VPS + G+ K+KA++AYK L+ C + S CPFG RCFYAH D G DVK Sbjct: 182 CFDDIVQSGKHFGLLHCDHCFCLDCLRSWRQSKDMELEVIRACPACRLPSDFIVPSLIFVTGEEKRKAVEAYKSHLALRECKYFNGLFGS----CPFGPRCFYAHRDSEGRDVK 291
BLAST of mRNA_L-elsbetiae_contig11941.1657.1 vs. uniprot
Match: A0A0P1AX59_PLAHL (RING-type E3 ubiquitin transferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AX59_PLAHL) HSP 1 Score: 120 bits (301), Expect = 1.090e-29 Identity = 56/114 (49.12%), Postives = 71/114 (62.28%), Query Frame = 1 Query: 1 CLENIPASGKRFGLMNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKQKAIQAYKKGLSKLPCNRSSNSSSSSSNVCPFGARCFYAHLDENGNDVK 342 C ++I SGK FGL+NCDH +CLECLR+WR+SK + ++ R CP CR S F+VPS + G+ K K + YK L+ C + S S CPFG RCFYAH D G DVK Sbjct: 181 CFDDIVQSGKHFGLLNCDHCFCLECLRSWRQSKNMELEVIRACPACRLPSDFIVPSLIFVTGEKKLKVTKVYKSHLALRECKYFTGSFGS----CPFGPRCFYAHRDTEGRDVK 290
BLAST of mRNA_L-elsbetiae_contig11941.1657.1 vs. uniprot
Match: H3GG35_PHYRM (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GG35_PHYRM) HSP 1 Score: 120 bits (301), Expect = 1.300e-29 Identity = 55/114 (48.25%), Postives = 73/114 (64.04%), Query Frame = 1 Query: 1 CLENIPASGKRFGLMNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKQKAIQAYKKGLSKLPCNRSSNSSSSSSNVCPFGARCFYAHLDENGNDVK 342 C ++I SGK FGL++CDH +CL+CLR+WR+SK + ++ R CP CR S F+VPS KG+ K+K ++AYK L+ C + S CPFG RCFYAH D G DVK Sbjct: 192 CFDDIVQSGKHFGLLSCDHCFCLDCLRSWRQSKDMELEVIRACPACRVPSDFIVPSLIFCKGEEKRKVVEAYKSHLALRECKYFNGLFGS----CPFGPRCFYAHRDGEGRDVK 301
BLAST of mRNA_L-elsbetiae_contig11941.1657.1 vs. uniprot
Match: G4YZV9_PHYSP (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZV9_PHYSP) HSP 1 Score: 119 bits (299), Expect = 1.440e-29 Identity = 55/114 (48.25%), Postives = 72/114 (63.16%), Query Frame = 1 Query: 1 CLENIPASGKRFGLMNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSFFLVPSKEHLKGKAKQKAIQAYKKGLSKLPCNRSSNSSSSSSNVCPFGARCFYAHLDENGNDVK 342 C ++I SGK FGL++CDH +CL+CLR WR+SK + ++ R CP CR S F+VPS KG+ K+K ++AYK L+ C + S CPFG RCFYAH D G DVK Sbjct: 156 CFDDIIQSGKHFGLLSCDHCFCLDCLREWRQSKDMELEVIRACPACRVPSDFIVPSLIFCKGEEKRKVVEAYKSHLALRECKYFNGLFGS----CPFGPRCFYAHRDAEGRDVK 265 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11941.1657.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig11941.1657.1 >prot_L-elsbetiae_contig11941.1657.1 ID=prot_L-elsbetiae_contig11941.1657.1|Name=mRNA_L-elsbetiae_contig11941.1657.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=162bp CLENIPASGKRFGLMNCDHVYCLECLRTWRKSKGPQKDISRTCPECRKVSback to top mRNA from alignment at L-elsbetiae_contig11941:1712..3630+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig11941.1657.1 ID=mRNA_L-elsbetiae_contig11941.1657.1|Name=mRNA_L-elsbetiae_contig11941.1657.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1919bp|location=Sequence derived from alignment at L-elsbetiae_contig11941:1712..3630+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig11941:1712..3630+ >mRNA_L-elsbetiae_contig11941.1657.1 ID=mRNA_L-elsbetiae_contig11941.1657.1|Name=mRNA_L-elsbetiae_contig11941.1657.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=972bp|location=Sequence derived from alignment at L-elsbetiae_contig11941:1712..3630+ (Laminarionema elsbetiae ELsaHSoW15)back to top |