prot_L-elsbetiae_contig119.1623.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig119.1623.1
Unique Name	prot_L-elsbetiae_contig119.1623.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	138

Homology

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BLAST of mRNA_L-elsbetiae_contig119.1623.1 vs. uniprot
Match: D7FRN0_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRN0_ECTSI)

HSP 1 Score: 271 bits (694), Expect = 7.320e-92
Identity = 121/137 (88.32%), Postives = 128/137 (93.43%), Query Frame = 0

Query:    1 GWWTRPRANPDGSQCIMKWECGLPGPTNTNWEGGEYKIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEDIGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAFELFVHNRPEYDSRVLLEAQKNPPAA 137
            GWWTR  ANPDGS  IMKWECGLPGP NTNWEGGEY+IHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNE  GWRPSITIKQMLHGIFELLDNPNPDDPAQSEA++LFV+N+ EYD RVL+EA+KNPPAA
Sbjct:   25 GWWTRLSANPDGSSSIMKWECGLPGPKNTNWEGGEYRIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPPAA 161

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BLAST of mRNA_L-elsbetiae_contig119.1623.1 vs. uniprot
Match: A0A835YNI1_9STRA (Ubiquitin conjugating enzyme n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNI1_9STRA)

HSP 1 Score: 217 bits (553), Expect = 2.250e-70
Identity = 95/135 (70.37%), Postives = 117/135 (86.67%), Query Frame = 0

Query:    1 GWWTRPRANPDGSQCIMKWECGLPGPTNTNWEGGEYKIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEDIGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAFELFVHNRPEYDSRVLLEAQKNPP 135
            G++ RP +NPD S  +MKW+CG+PG  +++W GG YK+ MEFT++YPSKPPKCKFVPPLFHPNVYPSGT+CLSILNED GWRP+ITIKQML GI +LLDNPNP+ PAQSEA+++FV+NR EY+ RV LEA+KN P
Sbjct:   24 GFYARPVSNPDNSMNLMKWDCGIPGVASSDWAGGVYKLSMEFTDEYPSKPPKCKFVPPLFHPNVYPSGTVCLSILNEDDGWRPAITIKQMLLGIQDLLDNPNPNSPAQSEAYQMFVNNRAEYNRRVRLEARKNIP 158

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BLAST of mRNA_L-elsbetiae_contig119.1623.1 vs. uniprot
Match: A0A6U0IJL9_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0IJL9_9STRA)

HSP 1 Score: 209 bits (532), Expect = 3.440e-67
Identity = 92/136 (67.65%), Postives = 114/136 (83.82%), Query Frame = 0

Query:    1 GWWTRPRANPDGSQCIMKWECGLPGPTNTNWEGGEYKIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEDIGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAFELFVHNRPEYDSRVLLEAQKNPPA 136
            G++ RP +  DGS  +MKW  G+PG  NT+W GG YK+ +EF+E+YPSKPPKCKFVPPLFHPNVYPSGTICLSILNE+ GWRP+ITIKQML GI +LLD+PNP+ PAQSEA++LF++N+PEY  RV  EA+KN P+
Sbjct:   24 GFYARPESKGDGSSNLMKWATGIPGKENTDWSGGVYKVTLEFSEEYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEEEGWRPAITIKQMLLGIQDLLDDPNPNSPAQSEAYQLFMNNKPEYKRRVKAEARKNAPS 159

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BLAST of mRNA_L-elsbetiae_contig119.1623.1 vs. uniprot
Match: A0A448ZL65_9STRA (UBC core domain-containing protein n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A448ZL65_9STRA)

HSP 1 Score: 209 bits (531), Expect = 4.580e-67
Identity = 92/135 (68.15%), Postives = 112/135 (82.96%), Query Frame = 0

Query:    1 GWWTRPRANPDGSQCIMKWECGLPGPTNTNWEGGEYKIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEDIGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAFELFVHNRPEYDSRVLLEAQKNPP 135
            G++ RP +  DGS  IMKWE G+PG   T+WE G +K+ MEF+EDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNE+ GWRP+IT+KQ+L GI +LLD+PNP+ PAQSEA++LF+HN+ EY  RV  EA+KN P
Sbjct:   24 GFYARPTSKGDGSSDIMKWEAGIPGKEGTDWENGVFKVSMEFSEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEEEGWRPAITLKQVLIGIQDLLDDPNPNSPAQSEAYQLFIHNKTEYKRRVQAEARKNTP 158

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BLAST of mRNA_L-elsbetiae_contig119.1623.1 vs. uniprot
Match: D7G3Z7_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3Z7_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 6.720e-67
Identity = 94/136 (69.12%), Postives = 110/136 (80.88%), Query Frame = 0

Query:    1 GWWTRPRANPDGSQCIMKWECGLPGPTNTNWEGGEYKIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEDIGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAFELFVHNRPEYDSRVLLEAQKNPPA 136
            G+  +P    D S  +++WECGLPGP +T+W GG Y + MEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSIL+ED GWRP+ITIKQML GI +L D PNP+ PAQSEA++LFV N+ EY  RV LEAQKN P+
Sbjct:   23 GFHAKPMLKDDSSTDLLRWECGLPGPADTDWAGGLYTVTMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILDEDEGWRPAITIKQMLLGIHDLFDTPNPNSPAQSEAYQLFVTNKEEYKRRVRLEAQKNIPS 158

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BLAST of mRNA_L-elsbetiae_contig119.1623.1 vs. uniprot
Match: A0A7S2Y0C7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0C7_9STRA)

HSP 1 Score: 209 bits (531), Expect = 6.780e-67
Identity = 91/135 (67.41%), Postives = 114/135 (84.44%), Query Frame = 0

Query:    1 GWWTRPRANPDGSQCIMKWECGLPGPTNTNWEGGEYKIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEDIGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAFELFVHNRPEYDSRVLLEAQKNPP 135
            G++ RP  + D S  +MKWECG+PGP  T+WEGG YK+ MEF+E+YPSKPPKCKFVPPLFHPNVYPSGT+CLSILNE+  WRP+ITIKQML GI +LLDNPNP+ PAQS+A++L++ +R EY+ RV +EA+KN P
Sbjct:   33 GFYARPMMSDDNSTNLMKWECGMPGPEGTDWEGGMYKLTMEFSEEYPSKPPKCKFVPPLFHPNVYPSGTVCLSILNEEEDWRPAITIKQMLLGIQDLLDNPNPNSPAQSDAYQLYITDRAEYNRRVRMEARKNIP 167

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BLAST of mRNA_L-elsbetiae_contig119.1623.1 vs. uniprot
Match: A0A7S1UFU8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFU8_9STRA)

HSP 1 Score: 210 bits (534), Expect = 6.930e-67
Identity = 92/135 (68.15%), Postives = 114/135 (84.44%), Query Frame = 0

Query:    1 GWWTRPRANPDGSQCIMKWECGLPGPTNTNWEGGEYKIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEDIGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAFELFVHNRPEYDSRVLLEAQKNPP 135
            G+  RP  + DG+  +MKW+CG+PGP NTNWEGG Y + MEFTEDYPS+PPK +FVPPLFHPN+YPSGT+CLSILNED  WRPSITIKQML G+ +LL+NPNPD PAQ+EAF+LF+++R EY++RV  EA+KN P
Sbjct:   66 GFHARPEQSEDGTNNLMKWKCGIPGPENTNWEGGLYTVTMEFTEDYPSRPPKVRFVPPLFHPNIYPSGTVCLSILNEDEDWRPSITIKQMLLGVQDLLNNPNPDSPAQNEAFQLFMNDREEYNNRVREEARKNIP 200

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BLAST of mRNA_L-elsbetiae_contig119.1623.1 vs. uniprot
Match: A0A7R9YA17_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YA17_9STRA)

HSP 1 Score: 207 bits (527), Expect = 2.260e-66
Identity = 92/135 (68.15%), Postives = 114/135 (84.44%), Query Frame = 0

Query:    1 GWWTRPRANPDGSQCIMKWECGLPGPTNTNWEGGEYKIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEDIGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAFELFVHNRPEYDSRVLLEAQKNPP 135
            G+  RP A+ DG+  IMKWEC +PGP NT+WEGG Y + MEFTE+YPS+PPK +FVPPLFHPNVYPSGT+CLSILNED  WRPSITIKQML G+ +LL+NPNPD PAQ+EA++LF+++R EY++RV  EA+KN P
Sbjct:   28 GFVARPMASDDGTNNIMKWECRIPGPENTDWEGGLYTVTMEFTEEYPSRPPKVRFVPPLFHPNVYPSGTVCLSILNEDQDWRPSITIKQMLLGVQDLLNNPNPDSPAQNEAYQLFINDREEYNTRVREEARKNMP 162

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BLAST of mRNA_L-elsbetiae_contig119.1623.1 vs. uniprot
Match: A0A7S3NHG5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NHG5_9STRA)

HSP 1 Score: 205 bits (521), Expect = 1.630e-65
Identity = 87/135 (64.44%), Postives = 107/135 (79.26%), Query Frame = 0

Query:    1 GWWTRPRANPDGSQCIMKWECGLPGPTNTNWEGGEYKIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEDIGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAFELFVHNRPEYDSRVLLEAQKNPP 135
            G+W RP   PDG+  +++W+CG+PG   T+WE G Y++ MEFTEDYPSKPPKCKF PPLFHPNVYPSGTICLSILNED  WRP+ITIKQML GI +LLD PNP  PAQ  A++LF++++  Y  R+  EA+KNPP
Sbjct:   23 GFWARPALKPDGTTSLLQWDCGIPGKKGTDWENGVYRVRMEFTEDYPSKPPKCKFTPPLFHPNVYPSGTICLSILNEDQDWRPAITIKQMLLGIQDLLDTPNPRSPAQDAAYKLFINDKNAYSQRIRQEARKNPP 157

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BLAST of mRNA_L-elsbetiae_contig119.1623.1 vs. uniprot
Match: A0A7S4AH06_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AH06_9STRA)

HSP 1 Score: 204 bits (520), Expect = 2.170e-65
Identity = 90/133 (67.67%), Postives = 110/133 (82.71%), Query Frame = 0

Query:    3 WTRPRANPDGSQCIMKWECGLPGPTNTNWEGGEYKIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEDIGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAFELFVHNRPEYDSRVLLEAQKNPP 135
            + RP +  DGS  IMKWE G+PG   T+WE G +K+ MEF+EDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNE+ GWRP+IT+KQ+L GI +LL++PNP+ PAQSEA++LF+HN+ EY  RV  EA+KN P
Sbjct:   26 YARPTSKGDGSSDIMKWEAGIPGKEGTDWENGVFKVSMEFSEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEEEGWRPAITLKQVLIGIQDLLNDPNPNSPAQSEAYQLFIHNKAEYKRRVQAEARKNTP 158

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig119.1623.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig119.1623.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FRN0_ECTSI	7.320e-92	88.32	UBC core domain-containing protein n=2 Tax=Ectocar...	[more]
A0A835YNI1_9STRA	2.250e-70	70.37	Ubiquitin conjugating enzyme n=1 Tax=Tribonema min...	[more]
A0A6U0IJL9_9STRA	3.440e-67	67.65	Hypothetical protein n=1 Tax=Minutocellus polymorp...	[more]
A0A448ZL65_9STRA	4.580e-67	68.15	UBC core domain-containing protein n=2 Tax=Bacilla...	[more]
D7G3Z7_ECTSI	6.720e-67	69.12	UBC core domain-containing protein n=2 Tax=Ectocar...	[more]
A0A7S2Y0C7_9STRA	6.780e-67	67.41	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S1UFU8_9STRA	6.930e-67	68.15	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A7R9YA17_9STRA	2.260e-66	68.15	Hypothetical protein (Fragment) n=1 Tax=Pinguiococ...	[more]
A0A7S3NHG5_9STRA	1.630e-65	64.44	Hypothetical protein n=1 Tax=Aureoumbra lagunensis...	[more]
A0A7S4AH06_9STRA	2.170e-65	67.67	Hypothetical protein n=1 Tax=Pseudo-nitzschia aust...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 7..135 e-value: 1.8E-41 score: 153.8
None	No IPR available	PANTHER	PTHR24067	UBIQUITIN-CONJUGATING ENZYME E2	coord: 3..134
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 11..126 e-value: 7.7E-40 score: 135.8
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 1..124 score: 33.761
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10		coord: 1..136 e-value: 7.2E-51 score: 174.2
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 15..132
IPR027230	SUMO-conjugating enzyme Ubc9	PANTHER	PTHR24067:SF248	DORSAL INTERACTING PROTEIN 4	coord: 3..134
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBIQUITIN_CONJUGAT_1	coord: 60..75

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig119	contig	L-elsbetiae_contig119:3923..7735 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig119.1623.1	mRNA_L-elsbetiae_contig119.1623.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig119 3923..7735 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig119.1623.1 ID=prot_L-elsbetiae_contig119.1623.1|Name=mRNA_L-elsbetiae_contig119.1623.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=138bp
GWWTRPRANPDGSQCIMKWECGLPGPTNTNWEGGEYKIHMEFTEDYPSKP
PKCKFVPPLFHPNVYPSGTICLSILNEDIGWRPSITIKQMLHGIFELLDN
PNPDDPAQSEAFELFVHNRPEYDSRVLLEAQKNPPAA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000608	UBQ-conjugat_E2
IPR016135	UBQ-conjugating_enzyme/RWD
IPR027230	Ubc9
IPR023313	UBQ-conjugating_AS