mRNA_L-elsbetiae_contig119.1623.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig119.1623.1
Unique NamemRNA_L-elsbetiae_contig119.1623.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig119.1623.1 vs. uniprot
Match: D7FRN0_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRN0_ECTSI)

HSP 1 Score: 271 bits (694), Expect = 7.320e-92
Identity = 121/137 (88.32%), Postives = 128/137 (93.43%), Query Frame = 1 
Query:    1 GWWTRPRANPDGSQCIMKWECGLPGPTNTNWEGGEYKIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEDIGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAFELFVHNRPEYDSRVLLEAQKNPPAA 411
            GWWTR  ANPDGS  IMKWECGLPGP NTNWEGGEY+IHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNE  GWRPSITIKQMLHGIFELLDNPNPDDPAQSEA++LFV+N+ EYD RVL+EA+KNPPAA
Sbjct:   25 GWWTRLSANPDGSSSIMKWECGLPGPKNTNWEGGEYRIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEGQGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAYQLFVNNKAEYDRRVLIEAKKNPPAA 161
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BLAST of mRNA_L-elsbetiae_contig119.1623.1 vs. uniprot
Match: A0A835YNI1_9STRA (Ubiquitin conjugating enzyme n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNI1_9STRA)

HSP 1 Score: 217 bits (553), Expect = 2.250e-70
Identity = 95/135 (70.37%), Postives = 117/135 (86.67%), Query Frame = 1 
Query:    1 GWWTRPRANPDGSQCIMKWECGLPGPTNTNWEGGEYKIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEDIGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAFELFVHNRPEYDSRVLLEAQKNPP 405
            G++ RP +NPD S  +MKW+CG+PG  +++W GG YK+ MEFT++YPSKPPKCKFVPPLFHPNVYPSGT+CLSILNED GWRP+ITIKQML GI +LLDNPNP+ PAQSEA+++FV+NR EY+ RV LEA+KN P
Sbjct:   24 GFYARPVSNPDNSMNLMKWDCGIPGVASSDWAGGVYKLSMEFTDEYPSKPPKCKFVPPLFHPNVYPSGTVCLSILNEDDGWRPAITIKQMLLGIQDLLDNPNPNSPAQSEAYQMFVNNRAEYNRRVRLEARKNIP 158
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BLAST of mRNA_L-elsbetiae_contig119.1623.1 vs. uniprot
Match: A0A6U0IJL9_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0IJL9_9STRA)

HSP 1 Score: 209 bits (532), Expect = 3.440e-67
Identity = 92/136 (67.65%), Postives = 114/136 (83.82%), Query Frame = 1 
Query:    1 GWWTRPRANPDGSQCIMKWECGLPGPTNTNWEGGEYKIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEDIGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAFELFVHNRPEYDSRVLLEAQKNPPA 408
            G++ RP +  DGS  +MKW  G+PG  NT+W GG YK+ +EF+E+YPSKPPKCKFVPPLFHPNVYPSGTICLSILNE+ GWRP+ITIKQML GI +LLD+PNP+ PAQSEA++LF++N+PEY  RV  EA+KN P+
Sbjct:   24 GFYARPESKGDGSSNLMKWATGIPGKENTDWSGGVYKVTLEFSEEYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEEEGWRPAITIKQMLLGIQDLLDDPNPNSPAQSEAYQLFMNNKPEYKRRVKAEARKNAPS 159
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BLAST of mRNA_L-elsbetiae_contig119.1623.1 vs. uniprot
Match: A0A448ZL65_9STRA (UBC core domain-containing protein n=2 Tax=Bacillariaceae TaxID=33852 RepID=A0A448ZL65_9STRA)

HSP 1 Score: 209 bits (531), Expect = 4.580e-67
Identity = 92/135 (68.15%), Postives = 112/135 (82.96%), Query Frame = 1 
Query:    1 GWWTRPRANPDGSQCIMKWECGLPGPTNTNWEGGEYKIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEDIGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAFELFVHNRPEYDSRVLLEAQKNPP 405
            G++ RP +  DGS  IMKWE G+PG   T+WE G +K+ MEF+EDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNE+ GWRP+IT+KQ+L GI +LLD+PNP+ PAQSEA++LF+HN+ EY  RV  EA+KN P
Sbjct:   24 GFYARPTSKGDGSSDIMKWEAGIPGKEGTDWENGVFKVSMEFSEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEEEGWRPAITLKQVLIGIQDLLDDPNPNSPAQSEAYQLFIHNKTEYKRRVQAEARKNTP 158
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BLAST of mRNA_L-elsbetiae_contig119.1623.1 vs. uniprot
Match: D7G3Z7_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3Z7_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 6.720e-67
Identity = 94/136 (69.12%), Postives = 110/136 (80.88%), Query Frame = 1 
Query:    1 GWWTRPRANPDGSQCIMKWECGLPGPTNTNWEGGEYKIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEDIGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAFELFVHNRPEYDSRVLLEAQKNPPA 408
            G+  +P    D S  +++WECGLPGP +T+W GG Y + MEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSIL+ED GWRP+ITIKQML GI +L D PNP+ PAQSEA++LFV N+ EY  RV LEAQKN P+
Sbjct:   23 GFHAKPMLKDDSSTDLLRWECGLPGPADTDWAGGLYTVTMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILDEDEGWRPAITIKQMLLGIHDLFDTPNPNSPAQSEAYQLFVTNKEEYKRRVRLEAQKNIPS 158
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BLAST of mRNA_L-elsbetiae_contig119.1623.1 vs. uniprot
Match: A0A7S2Y0C7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0C7_9STRA)

HSP 1 Score: 209 bits (531), Expect = 6.780e-67
Identity = 91/135 (67.41%), Postives = 114/135 (84.44%), Query Frame = 1 
Query:    1 GWWTRPRANPDGSQCIMKWECGLPGPTNTNWEGGEYKIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEDIGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAFELFVHNRPEYDSRVLLEAQKNPP 405
            G++ RP  + D S  +MKWECG+PGP  T+WEGG YK+ MEF+E+YPSKPPKCKFVPPLFHPNVYPSGT+CLSILNE+  WRP+ITIKQML GI +LLDNPNP+ PAQS+A++L++ +R EY+ RV +EA+KN P
Sbjct:   33 GFYARPMMSDDNSTNLMKWECGMPGPEGTDWEGGMYKLTMEFSEEYPSKPPKCKFVPPLFHPNVYPSGTVCLSILNEEEDWRPAITIKQMLLGIQDLLDNPNPNSPAQSDAYQLYITDRAEYNRRVRMEARKNIP 167
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BLAST of mRNA_L-elsbetiae_contig119.1623.1 vs. uniprot
Match: A0A7S1UFU8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFU8_9STRA)

HSP 1 Score: 210 bits (534), Expect = 6.930e-67
Identity = 92/135 (68.15%), Postives = 114/135 (84.44%), Query Frame = 1 
Query:    1 GWWTRPRANPDGSQCIMKWECGLPGPTNTNWEGGEYKIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEDIGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAFELFVHNRPEYDSRVLLEAQKNPP 405
            G+  RP  + DG+  +MKW+CG+PGP NTNWEGG Y + MEFTEDYPS+PPK +FVPPLFHPN+YPSGT+CLSILNED  WRPSITIKQML G+ +LL+NPNPD PAQ+EAF+LF+++R EY++RV  EA+KN P
Sbjct:   66 GFHARPEQSEDGTNNLMKWKCGIPGPENTNWEGGLYTVTMEFTEDYPSRPPKVRFVPPLFHPNIYPSGTVCLSILNEDEDWRPSITIKQMLLGVQDLLNNPNPDSPAQNEAFQLFMNDREEYNNRVREEARKNIP 200
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BLAST of mRNA_L-elsbetiae_contig119.1623.1 vs. uniprot
Match: A0A7R9YA17_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YA17_9STRA)

HSP 1 Score: 207 bits (527), Expect = 2.260e-66
Identity = 92/135 (68.15%), Postives = 114/135 (84.44%), Query Frame = 1 
Query:    1 GWWTRPRANPDGSQCIMKWECGLPGPTNTNWEGGEYKIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEDIGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAFELFVHNRPEYDSRVLLEAQKNPP 405
            G+  RP A+ DG+  IMKWEC +PGP NT+WEGG Y + MEFTE+YPS+PPK +FVPPLFHPNVYPSGT+CLSILNED  WRPSITIKQML G+ +LL+NPNPD PAQ+EA++LF+++R EY++RV  EA+KN P
Sbjct:   28 GFVARPMASDDGTNNIMKWECRIPGPENTDWEGGLYTVTMEFTEEYPSRPPKVRFVPPLFHPNVYPSGTVCLSILNEDQDWRPSITIKQMLLGVQDLLNNPNPDSPAQNEAYQLFINDREEYNTRVREEARKNMP 162
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BLAST of mRNA_L-elsbetiae_contig119.1623.1 vs. uniprot
Match: A0A7S3NHG5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NHG5_9STRA)

HSP 1 Score: 205 bits (521), Expect = 1.630e-65
Identity = 87/135 (64.44%), Postives = 107/135 (79.26%), Query Frame = 1 
Query:    1 GWWTRPRANPDGSQCIMKWECGLPGPTNTNWEGGEYKIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEDIGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAFELFVHNRPEYDSRVLLEAQKNPP 405
            G+W RP   PDG+  +++W+CG+PG   T+WE G Y++ MEFTEDYPSKPPKCKF PPLFHPNVYPSGTICLSILNED  WRP+ITIKQML GI +LLD PNP  PAQ  A++LF++++  Y  R+  EA+KNPP
Sbjct:   23 GFWARPALKPDGTTSLLQWDCGIPGKKGTDWENGVYRVRMEFTEDYPSKPPKCKFTPPLFHPNVYPSGTICLSILNEDQDWRPAITIKQMLLGIQDLLDTPNPRSPAQDAAYKLFINDKNAYSQRIRQEARKNPP 157
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BLAST of mRNA_L-elsbetiae_contig119.1623.1 vs. uniprot
Match: A0A7S4AH06_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AH06_9STRA)

HSP 1 Score: 204 bits (520), Expect = 2.170e-65
Identity = 90/133 (67.67%), Postives = 110/133 (82.71%), Query Frame = 1 
Query:    7 WTRPRANPDGSQCIMKWECGLPGPTNTNWEGGEYKIHMEFTEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEDIGWRPSITIKQMLHGIFELLDNPNPDDPAQSEAFELFVHNRPEYDSRVLLEAQKNPP 405
            + RP +  DGS  IMKWE G+PG   T+WE G +K+ MEF+EDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNE+ GWRP+IT+KQ+L GI +LL++PNP+ PAQSEA++LF+HN+ EY  RV  EA+KN P
Sbjct:   26 YARPTSKGDGSSDIMKWEAGIPGKEGTDWENGVFKVSMEFSEDYPSKPPKCKFVPPLFHPNVYPSGTICLSILNEEEGWRPAITLKQVLIGIQDLLNDPNPNSPAQSEAYQLFIHNKAEYKRRVQAEARKNTP 158
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig119.1623.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRN0_ECTSI7.320e-9288.32UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A835YNI1_9STRA2.250e-7070.37Ubiquitin conjugating enzyme n=1 Tax=Tribonema min... [more]
A0A6U0IJL9_9STRA3.440e-6767.65Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A448ZL65_9STRA4.580e-6768.15UBC core domain-containing protein n=2 Tax=Bacilla... [more]
D7G3Z7_ECTSI6.720e-6769.12UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A7S2Y0C7_9STRA6.780e-6767.41Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1UFU8_9STRA6.930e-6768.15Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9YA17_9STRA2.260e-6668.15Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S3NHG5_9STRA1.630e-6564.44Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S4AH06_9STRA2.170e-6567.67Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig119contigL-elsbetiae_contig119:3923..7735 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score273.1
Seed ortholog evalue7.2e-71
Seed eggNOG ortholog2880.D7FRN0
Preferred namehus5
KEGG koko:K10577
KEGG Pathwayko03013,ko04064,ko04120,ko05206,map03013,map04064,map04120,map05206
KEGG ModuleM00427
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000022,GO:0000070,GO:0000122,GO:0000226,GO:0000228,GO:0000278,GO:0000280,GO:0000785,GO:0000790,GO:0000792,GO:0000793,GO:0000794,GO:0000795,GO:0000819,GO:0001101,GO:0002178,GO:0003006,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005694,GO:0005720,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0006066,GO:0006355,GO:0006357,GO:0006464,GO:0006508,GO:0006511,GO:0006629,GO:0006643,GO:0006644,GO:0006665,GO:0006667,GO:0006670,GO:0006672,GO:0006684,GO:0006686,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007275,GO:0008134,GO:0008150,GO:0008152,GO:0008610,GO:0008641,GO:0008654,GO:0009056,GO:0009057,GO:0009058,GO:0009719,GO:0009725,GO:0009737,GO:0009790,GO:0009791,GO:0009793,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010033,GO:0010154,GO:0010468,GO:0010506,GO:0010508,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010629,GO:0012505,GO:0016020,GO:0016043,GO:0016239,GO:0016241,GO:0016604,GO:0016605,GO:0016740,GO:0016874,GO:0016877,GO:0016925,GO:0017059,GO:0018193,GO:0018205,GO:0019219,GO:0019222,GO:0019538,GO:0019637,GO:0019751,GO:0019787,GO:0019789,GO:0019899,GO:0019904,GO:0019941,GO:0019948,GO:0022402,GO:0022414,GO:0030148,GO:0030163,GO:0031211,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031331,GO:0031399,GO:0031401,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0032268,GO:0032270,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0033233,GO:0033235,GO:0033993,GO:0034311,GO:0034312,GO:0034641,GO:0035339,GO:0036211,GO:0042175,GO:0042221,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043603,GO:0043604,GO:0043632,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044255,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044388,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045892,GO:0045934,GO:0046165,GO:0046173,GO:0046467,GO:0046511,GO:0046512,GO:0046513,GO:0046519,GO:0046520,GO:0048285,GO:0048316,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051231,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051276,GO:0051338,GO:0051347,GO:0051603,GO:0060255,GO:0061458,GO:0061650,GO:0061656,GO:0065007,GO:0065009,GO:0070013,GO:0070647,GO:0071535,GO:0071704,GO:0071840,GO:0080090,GO:0090407,GO:0097164,GO:0097305,GO:0098796,GO:0098813,GO:0098827,GO:0099086,GO:0140014,GO:0140096,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901617,GO:1901700,GO:1902494,GO:1902679,GO:1902850,GO:1903047,GO:1903182,GO:1903320,GO:1903322,GO:1903506,GO:1903507,GO:1903755,GO:1904502,GO:1904504,GO:1905961,GO:1990234,GO:1990356,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.protein modification by small protein conjugation
EggNOG OGsCOG5078@1,KOG0424@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko04121
Ec32 ortholog descriptionUbiquitin-conjugating enzyme/RWD-like
Ec32 orthologEc-12_002440.1
Exons6
Model size414
Cds size414
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig119.1623.1prot_L-elsbetiae_contig119.1623.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig119 3923..7735 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815389.7109387-CDS-L-elsbetiae_contig119:3922..40001622815389.7109387-CDS-L-elsbetiae_contig119:3922..4000Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig119 3923..4000 +
1691682874.50653-CDS-L-elsbetiae_contig119:3922..40001691682874.50653-CDS-L-elsbetiae_contig119:3922..4000Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig119 3923..4000 +
1622815389.7227137-CDS-L-elsbetiae_contig119:4686..47551622815389.7227137-CDS-L-elsbetiae_contig119:4686..4755Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig119 4687..4755 +
1691682874.5186017-CDS-L-elsbetiae_contig119:4686..47551691682874.5186017-CDS-L-elsbetiae_contig119:4686..4755Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig119 4687..4755 +
1622815389.7352371-CDS-L-elsbetiae_contig119:5374..54451622815389.7352371-CDS-L-elsbetiae_contig119:5374..5445Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig119 5375..5445 +
1691682874.527572-CDS-L-elsbetiae_contig119:5374..54451691682874.527572-CDS-L-elsbetiae_contig119:5374..5445Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig119 5375..5445 +
1622815389.746246-CDS-L-elsbetiae_contig119:6443..65311622815389.746246-CDS-L-elsbetiae_contig119:6443..6531Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig119 6444..6531 +
1691682874.5365736-CDS-L-elsbetiae_contig119:6443..65311691682874.5365736-CDS-L-elsbetiae_contig119:6443..6531Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig119 6444..6531 +
1622815389.7588205-CDS-L-elsbetiae_contig119:7046..70871622815389.7588205-CDS-L-elsbetiae_contig119:7046..7087Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig119 7047..7087 +
1691682874.545841-CDS-L-elsbetiae_contig119:7046..70871691682874.545841-CDS-L-elsbetiae_contig119:7046..7087Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig119 7047..7087 +
1622815389.7705624-CDS-L-elsbetiae_contig119:7668..77351622815389.7705624-CDS-L-elsbetiae_contig119:7668..7735Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig119 7669..7735 +
1691682874.5543852-CDS-L-elsbetiae_contig119:7668..77351691682874.5543852-CDS-L-elsbetiae_contig119:7668..7735Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig119 7669..7735 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig119.1623.1

>prot_L-elsbetiae_contig119.1623.1 ID=prot_L-elsbetiae_contig119.1623.1|Name=mRNA_L-elsbetiae_contig119.1623.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=138bp
GWWTRPRANPDGSQCIMKWECGLPGPTNTNWEGGEYKIHMEFTEDYPSKP
PKCKFVPPLFHPNVYPSGTICLSILNEDIGWRPSITIKQMLHGIFELLDN
PNPDDPAQSEAFELFVHNRPEYDSRVLLEAQKNPPAA*
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mRNA from alignment at L-elsbetiae_contig119:3923..7735+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig119.1623.1 ID=mRNA_L-elsbetiae_contig119.1623.1|Name=mRNA_L-elsbetiae_contig119.1623.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3813bp|location=Sequence derived from alignment at L-elsbetiae_contig119:3923..7735+ (Laminarionema elsbetiae ELsaHSoW15)
GGCTGGTGGACTCGGCCTCGTGCGAACCCAGACGGCTCCCAATGCATCAT
GAAGTGGGAGTGCGGCCTCCCAGGGCCGGTGAGAAACTTGAAATTTCTGA
CCTCCAGTGACCCGTGTCGCGCCCCGGCATGGAGGAGGAATCTGCACCAT
TAAAATAGGCACTGGCACAGAGAGGATGTAGCGGTAGCAACGAAAGTCGC
CGCAGGGGGCTGAGGAGGCGTTGTGGGGCGAGTGTGGCGGTCATCCCTCG
CCCCGCACACAGAAATGCTTGGTCAGGTCAATACTCATCCGGTAGAGACA
GCACGCAGCATGCGTGGAGAACCCCCCAAGTTGGCTCCTCGAAGGCGGCT
AGACTTTTGCGGGTGGTGTGCGTGACGGGACGGAGAATCATTTTTGATTG
TGGAGTTCTGTTCACGGCTTTGTTTCTGGGCCCACAAAACTCTCTCGCCC
GCCTGGTGGGGCACTGCTGAGGCCCAATGCTCTACCGCGCTTTATGTGCA
GGCAGCTCTTCGGCCAGCCATGTTTTCCGGGCGATTTTCTGTTTTCTCCA
AGACTGCCACGGCCACTCTTCGTATCTAGTAGCAGGTGTGCTCCTCCCAC
ATGACTCGGACGGCAAGGCTGGATATTTCCATGCCAAGCGCGTTGCACGT
GCGACAAGAATTTCACACGAGTTGTGTCGGGAAGGCCTTGACGAATTCCC
GCCTCCTGTCACGCTGCACTTGCTGCTGCTGTGTCTCGCGGCATGGCATG
CCCCCGTTTCGCAGACGAACACAAACTGGGAAGGCGGAGAGTACAAGATC
CACATGGAGTTCACTGAAGACTACCCTTCGAAGGTGGGTGGTTGATCCGC
GCGCGTGCATGTTTTTTCGGGGCGCTTGGTTGGGAAAAAAAAATGCTTGG
TTGCACCGCCGTCTTGCATCGTGGCCTGCCTGGACGTGTAGCCGTCTAAC
TGGGCTCCGATCGTGCTCGTCCAGTAGCCTAGGAGGGTGTGCGTGGACAG
ACGCACTGGGAGTTATCCGGTCCAGCCCTTTGTCTGTGTTGCATGATAGC
ATTGTCATGTATTTCGACGTCGCTCAGGGTTACCACCTCGTTTGACTCGA
TCACGACCGCTTGTGCTGGCGCCAGAGGGTAGAAACTGCAGGCCTTTTTT
TGTATGTAGCAGTGCCTTACCGTCCTGCATGCAACAACACTCTTTGCAGC
TGGGCGGGAGTGTTGTCGCCGCTGCTGTGGTGACATATATGTACCTGCTC
TGTATCTGTGTCGCTGCCGTTCTTGTGTACGCCGCATGACCCTATCATCA
GCTTTCATCGACCGCAGCGTAATGTAGGATTTTCACTTTGTTGGCTGGCT
ATTTAGGTAGATGGCTGACGCCCCAAACCTTCGGCTTTGTTCGTTCTCTC
TTGCGCCCCCCCCCTCCACCTCTATCTTGAATGTCGCGATTCGTGACACC
AGCCGCCCAAGTGCAAATTCGTACCGCCCCTGTTCCACCCAAACGTTTAT
CCGAGCGGCACCATCTGCCTGAGGTAAGCGTTCATACTACACCCGGCGGC
GGAGTCGCGTAGTGCGTCCCGATTTTGTCTGACAAGTGAATATCAAGCGC
GTTCGCTCCGAGGTTTTGCGCGGCCGCGCTTGTCTCCCGTCGGCTGCAGG
TGGCTGCGAGATGTGTTACACCCATGTTTATAGGGAACAAATCTTGAAAA
TAAAAATCTTCGTCTATTTTGACCTTTGTGGCCACGTTTCTTCGTCACGT
GCTCGGAATCAGATTTTCGTTATTCAGGGACTTTCAAAGCTCTCTTCCAG
AGGTTTACGGATCAGCTGTCCAATCTGGCACACTCCGGGTTTGGTTGTGG
GCCTCGGAGCAAGATTTTGCTAGATTTGGCCAAGATTTACAAATTTTGCA
CATTTTGGCTAAATATTTGCGCGAACACGACTTTTCGGCCAGATCTTGGC
CAGATCCAGCAAAATCTTGCTCCGAGGCCAACAGTTAAACCCGGAGTGTG
CCAGACTGGACAGCTGATCTGTAGACGTCTGGAAGAGGGCTTCGAATGTT
GTTGAGAGGCGAAAATCTGATTCCGAGCTCTTGGCGAGGAAACGTGGCCA
CAAAGGTTAAAATACACCAAGATTTTTGTTTTCAAGATTTTTTTCTTATA
AACATGGGCCTTAGCTGGTGCCGCTTTGTGCGCGAAGAATTAATTCGGCG
CTCCGCTCGTGTTTGGACGAGCCGATGTCCACCGCCCTCTCTCGCATCCA
ACAGTTACAGTTTCAAGTACTCATCAACAGGGTGACCTGCGAATCCTGGG
TGGCGCCAAGTTTCTCTTGTTACCTACGGCAAAATCGACGGCACGGCATG
CTCGTCATCGATTTTTGTTGGTTGTGACCATCTTGCCAACCTCTTCCCGT
GTGTCTGCCAAGTGCATGTGTGCTGCTGCAAACTGTTCCCCGAGTGCCGT
GTTTGTATGGTATGTACTGAATTGACTCCGATGGTTGGCCCGTGTGCTTT
TGCTAATCCTTTGGCGAGCAGCATCCTCAACGAGGACATTGGGTGGAGGC
CCAGCATCACCATCAAGCAGATGCTTCACGGGATATTCGAACTGCTGGAC
AACCCGAACGTGAGTGAGAATGCGCAAGTGGGGTTGGTGCGTTTTTTCAT
CATGTACATTTTCAGGGCGTGTGTGCGTGAGTAGCACAACGGACGGTACG
CCATGAGATGTTATGTAGGGCTTCGCGTTTCGGCTGCGGTGCGTGCTGCT
GCGTCAGGGCTGCTTGATGCGAGAGGCCGCGAGCTCTTGCCTTTTCGTCG
TGCTATCTGTGTACGTGGGTGGCAGGACCTTGTGCGCAGCAGGAACGCAC
ATGAATTTGGGCATTCGGAGACTGTCGAGCTGTATCCGTGGCTACGACCG
CGATGCGGCTATCGATAGAAGCTGATGGGTGCTTGTGGGTGGGTAAACCA
TGCAAATGTATCGTGCTGTATTGCGTGACGTCATGGGCGCTGACTGTTGT
GATTTCACACCTGACACATTTTTTTTTTTTCATGTACGTAAACTACGGCG
GTGGCTTCATCGCTCGTGTTTTTCGCTTCTGCCTCTTCGTGCTTCGTGCG
CGTGGAACGAGGTTTCGTGTACAGCCCGATGACCCTGCGCAATCAGAGGC
GTTCGAACTATTCGTGTGAGTACCCCCTTGATGGCAATTGTAGGTCTAAC
CTAGCGCGCGTGTGTGTGTGTCGGTAAGATCGTGCGAACGGGCGCGTGGA
ATTATATGAGTCGCACACGTACATGCGCTGGCAATCTGTCGCCGATGTTG
GAGGTTGCGAAAGGGTGTATGGTCTGTCTTTGATTCTACTTGGTTTCCCG
GTGTACGTAGATTTCCCTATAAATAGTACTCTAACGTGCGCGGGCGTACT
TGGTTAGCTGCGTTTGTGTTGCGGGCCCGACGTTGTGAAATCGCGAAAGG
CTTGTGCTGTTGCAGTGTTAAATGCGACGCTAGTAATAGATGAAAGTGTG
CTTCGCTACAACCTGGTAATACCTAGGTACACAACAAATACATGTTTTTT
GAGAGATGTGGACCTTTCAAACACCGTAATTCATAGAGATGTGAGCGTCC
CATCTGCGTGTTGTATACCACCGCCCACAACATGTTTTTACTCCAGGAGT
AAAGTACCACGTACATATGTGTTGTGCACCGAACTTTGCGTGCGCCTTTT
GACGTACATGCGTGCGACGCAACCGAACGCAACGTTGCAAATGCAGGCAC
AACCGGCCGGAGTACGACAGCAGGGTGCTTCTCGAGGCCCAGAAAAACCC
ACCCGCCGCGTAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig119:3923..7735+

>mRNA_L-elsbetiae_contig119.1623.1 ID=mRNA_L-elsbetiae_contig119.1623.1|Name=mRNA_L-elsbetiae_contig119.1623.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=828bp|location=Sequence derived from alignment at L-elsbetiae_contig119:3923..7735+ (Laminarionema elsbetiae ELsaHSoW15)
GGCTGGTGGACTCGGCCTCGTGCGAACCCAGACGGCTCCCAATGCATCAT
GAAGTGGGAGTGCGGCCTCCCAGGGCCGGGCTGGTGGACTCGGCCTCGTG
CGAACCCAGACGGCTCCCAATGCATCATGAAGTGGGAGTGCGGCCTCCCA
GGGCCGACGAACACAAACTGGGAAGGCGGAGAGTACAAGATCCACATGGA
GTTCACTGAAGACTACCCTTCGAAGACGAACACAAACTGGGAAGGCGGAG
AGTACAAGATCCACATGGAGTTCACTGAAGACTACCCTTCGAAGCCGCCC
AAGTGCAAATTCGTACCGCCCCTGTTCCACCCAAACGTTTATCCGAGCGG
CACCATCTGCCTGAGCCGCCCAAGTGCAAATTCGTACCGCCCCTGTTCCA
CCCAAACGTTTATCCGAGCGGCACCATCTGCCTGAGCATCCTCAACGAGG
ACATTGGGTGGAGGCCCAGCATCACCATCAAGCAGATGCTTCACGGGATA
TTCGAACTGCTGGACAACCCGAACCATCCTCAACGAGGACATTGGGTGGA
GGCCCAGCATCACCATCAAGCAGATGCTTCACGGGATATTCGAACTGCTG
GACAACCCGAACCCCGATGACCCTGCGCAATCAGAGGCGTTCGAACTATT
CGTCCCGATGACCCTGCGCAATCAGAGGCGTTCGAACTATTCGTGCACAA
CCGGCCGGAGTACGACAGCAGGGTGCTTCTCGAGGCCCAGAAAAACCCAC
CCGCCGCGTAGGCACAACCGGCCGGAGTACGACAGCAGGGTGCTTCTCGA
GGCCCAGAAAAACCCACCCGCCGCGTAG
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