prot_L-elsbetiae_contig11873.1602.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11873.1602.1
Unique Nameprot_L-elsbetiae_contig11873.1602.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length59
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig11873.1602.1 vs. uniprot
Match: A0A6H5K832_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K832_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 3.740e-11
Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = 0 
Query:    1 MAERAVLRAGTSEKLTTFAAKAFETQRSKSSDLRASGTGNGHYTVGKQGSNYGNRVRL 58
            MAERA L    S++ T FAAK FE QR+KSS+L +S TGNG++TV K GSNYGNRV L
Sbjct:  298 MAERAELVNSASQRFTPFAAKEFEAQRAKSSNLHSSATGNGNFTVRKLGSNYGNRVGL 355
[Close]
BLAST of mRNA_L-elsbetiae_contig11873.1602.1 vs. uniprot
Match: A0A6H5KJU4_9PHAE (MULE domain-containing protein n=6 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJU4_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 3.940e-11
Identity = 37/58 (63.79%), Postives = 44/58 (75.86%), Query Frame = 0 
Query:    1 MAERAVLRAGTSEKLTTFAAKAFETQRSKSSDLRASGTGNGHYTVGKQGSNYGNRVRL 58
            MAERA L    S++ T FAAK FE QR+KSS+L +S TGNG++TV K GSNYGNRV L
Sbjct:  190 MAERAELVNSASQRFTPFAAKEFEAQRAKSSNLHSSATGNGNFTVRKLGSNYGNRVGL 247
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11873.1602.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K832_9PHAE3.740e-1163.79MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KJU4_9PHAE3.940e-1163.79MULE domain-containing protein n=6 Tax=Ectocarpus ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 56..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11873contigL-elsbetiae_contig11873:5029..5618 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11873.1602.1mRNA_L-elsbetiae_contig11873.1602.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11873 5029..5618 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11873.1602.1 ID=prot_L-elsbetiae_contig11873.1602.1|Name=mRNA_L-elsbetiae_contig11873.1602.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=59bp
MAERAVLRAGTSEKLTTFAAKAFETQRSKSSDLRASGTGNGHYTVGKQGS
NYGNRVRLV
back to top