prot_L-elsbetiae_contig11864.1598.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11864.1598.1
Unique Nameprot_L-elsbetiae_contig11864.1598.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length174
Homology
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BLAST of mRNA_L-elsbetiae_contig11864.1598.1 vs. uniprot
Match: A0A6H5KML4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KML4_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 2.950e-30
Identity = 80/121 (66.12%), Postives = 91/121 (75.21%), Query Frame = 0 
Query:   45 LAEVDEGSGKIPYRESRFSPRRGRRKREGGRGADXXXXXXXDAGAAHDGRESPACDRLFGLGDRAQRRRTDPPRDTPRTQRERQELEELKHCTFTPVMFTKDYCRGPRPRAGHEKGAPARR 165
            +AEVDE   +IPYRESRFSPRRGRRK+ GG   D  XXXXX  G +  GRESPAC+RLF LG R QR+R DPPRDTP++QRER ELEELK CTF+PV+ TK Y R PRPR     GAP+ R
Sbjct:  814 VAEVDEEGARIPYRESRFSPRRGRRKQGGG--YDGNXXXXXXGGES--GRESPACERLFELGHRQQRKRNDPPRDTPQSQRERDELEELKLCTFSPVLLTKAY-RRPRPRLA--TGAPSNR 927
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BLAST of mRNA_L-elsbetiae_contig11864.1598.1 vs. uniprot
Match: D7G310_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G310_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 1.340e-29
Identity = 73/121 (60.33%), Postives = 84/121 (69.42%), Query Frame = 0 
Query:   45 LAEVDEGSGKIPYRESRFSPRRGRRKREGGRGADXXXXXXXDAGAAHDGRESPACDRLFGLGDRAQRRRTDPPRDTPRTQRERQELEELKHCTFTPVMFTKDYCRGPRPRAGHEKGAPARR 165
            +AEVDE   +IPYRESRFSPRR RRK+ GG   +         G    GRESPAC+RLF LG R QR+R D PRDTP++QRER ELEELK CTF+PV+FTK Y R PRPR     GAP+ R
Sbjct:  714 VAEVDEEGARIPYRESRFSPRRRRRKQGGGYDGNGNDGH----GGGESGRESPACERLFELGHRQQRKRNDSPRDTPQSQRERDELEELKLCTFSPVLFTKAY-RRPRPRLA--TGAPSNR 827
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11864.1598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KML4_9PHAE2.950e-3066.12Reverse transcriptase domain-containing protein n=... [more]
D7G310_ECTSI1.340e-2960.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11864contigL-elsbetiae_contig11864:744..2566 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11864.1598.1mRNA_L-elsbetiae_contig11864.1598.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11864 658..3585 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11864.1598.1 ID=prot_L-elsbetiae_contig11864.1598.1|Name=mRNA_L-elsbetiae_contig11864.1598.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=174bp
MTGGGGGGGGSGGGSGGGGGYVAARGGSASDGSSVRSDIGSPDILAEVDE
GSGKIPYRESRFSPRRGRRKREGGRGADDGDNGGDDAGAAHDGRESPACD
RLFGLGDRAQRRRTDPPRDTPRTQRERQELEELKHCTFTPVMFTKDYCRG
PRPRAGHEKGAPARRNDEDCTRG*
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