prot_L-elsbetiae_contig11858.1594.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11858.1594.1
Unique Nameprot_L-elsbetiae_contig11858.1594.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length37
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig11858.1594.1 vs. uniprot
Match: D8LD92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD92_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 8.720e-14
Identity = 31/36 (86.11%), Postives = 35/36 (97.22%), Query Frame = 0 
Query:    1 VRFSHQIRVILVASRLEMSSVKADVWWGEKDYCDFR 36
            VRFS+QIRVILVASRLE+SSVK D+WWGE+DYCDFR
Sbjct:    5 VRFSNQIRVILVASRLELSSVKTDIWWGERDYCDFR 40
[Close]
BLAST of mRNA_L-elsbetiae_contig11858.1594.1 vs. uniprot
Match: A0A6H5L2K1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2K1_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 3.600e-13
Identity = 29/36 (80.56%), Postives = 35/36 (97.22%), Query Frame = 0 
Query:    1 VRFSHQIRVILVASRLEMSSVKADVWWGEKDYCDFR 36
            VRFS+QIRV+LVASRLE+SS+K D+WWGE+DYCDFR
Sbjct:  257 VRFSNQIRVVLVASRLELSSMKTDIWWGERDYCDFR 292
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11858.1594.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LD92_ECTSI8.720e-1486.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2K1_9PHAE3.600e-1380.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11858contigL-elsbetiae_contig11858:5636..5746 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11858.1594.1mRNA_L-elsbetiae_contig11858.1594.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11858 5636..5746 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11858.1594.1 ID=prot_L-elsbetiae_contig11858.1594.1|Name=mRNA_L-elsbetiae_contig11858.1594.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=37bp
VRFSHQIRVILVASRLEMSSVKADVWWGEKDYCDFR*
back to top