prot_L-elsbetiae_contig1178.1535.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1178.1535.1
Unique Nameprot_L-elsbetiae_contig1178.1535.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length46
Homology
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BLAST of mRNA_L-elsbetiae_contig1178.1535.1 vs. uniprot
Match: D8LG92_ECTSI (F5/8 type C domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG92_ECTSI)

HSP 1 Score: 69.7 bits (169), Expect = 1.010e-12
Identity = 26/40 (65.00%), Postives = 36/40 (90.00%), Query Frame = 0 
Query:    6 QGSPEPVQLAPTECNNKRGVAFGFQDAGDIDTLKDGLSWW 45
            +GS EPV+L PT+C++KRGVAFGF+++GD+ TLK G+SWW
Sbjct:   85 EGSSEPVELVPTQCSSKRGVAFGFKESGDLYTLKTGISWW 124
[Close]
BLAST of mRNA_L-elsbetiae_contig1178.1535.1 vs. uniprot
Match: A0A6H5KQ88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ88_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 4.290e-11
Identity = 24/40 (60.00%), Postives = 34/40 (85.00%), Query Frame = 0 
Query:    6 QGSPEPVQLAPTECNNKRGVAFGFQDAGDIDTLKDGLSWW 45
            +G  EPV+L PT+C++KRGVAFGF+++ D+ TLK G+SWW
Sbjct:   48 EGHSEPVELVPTQCSSKRGVAFGFKESDDLYTLKKGISWW 87
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1178.1535.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LG92_ECTSI1.010e-1265.00F5/8 type C domain protein n=1 Tax=Ectocarpus sili... [more]
A0A6H5KQ88_9PHAE4.290e-1160.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1178contigL-elsbetiae_contig1178:28216..28353 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1178.1535.1mRNA_L-elsbetiae_contig1178.1535.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1178 28216..28353 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1178.1535.1 ID=prot_L-elsbetiae_contig1178.1535.1|Name=mRNA_L-elsbetiae_contig1178.1535.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=46bp
FSACEQGSPEPVQLAPTECNNKRGVAFGFQDAGDIDTLKDGLSWW*
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