prot_L-elsbetiae_contig11728.1504.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11728.1504.1
Unique Nameprot_L-elsbetiae_contig11728.1504.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length145
Homology
BLAST of mRNA_L-elsbetiae_contig11728.1504.1 vs. uniprot
Match: D7G6C7_ECTSI (4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6C7_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 2.060e-89
Identity = 135/145 (93.10%), Postives = 141/145 (97.24%), Query Frame = 0
Query:    1 LSKRIPPEAGLGGGSANAATALFAANELAGHPASLEDLQLWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPQARVWLVKPNKGLSTPVVFRHLDYDQLSRVEPSHLLKQFMEEGLAEADYVNDLELPAFKAMPSLQQMKTEL 145
            LSKRIPPEAGLGGGSANAATALFAAN+LAGHPASLEDLQLWSAELGSDITFFLSTGTCYCTGRGE+LHPQ+PLPQ RVWLVKPNKGLSTPVVFRHLDYDQLSR+EP+ LLKQF+EEGLAEADYVNDLELPAFKAMPSLQ MK EL
Sbjct:  174 LSKRIPPEAGLGGGSANAATALFAANKLAGHPASLEDLQLWSAELGSDITFFLSTGTCYCTGRGEVLHPQEPLPQTRVWLVKPNKGLSTPVVFRHLDYDQLSRIEPAGLLKQFIEEGLAEADYVNDLELPAFKAMPSLQTMKEEL 318          
BLAST of mRNA_L-elsbetiae_contig11728.1504.1 vs. uniprot
Match: A0A835Z2M9_9STRA (4-diphosphocytidyl-2c-methyl-d-erythritol kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2M9_9STRA)

HSP 1 Score: 187 bits (475), Expect = 2.870e-56
Identity = 94/147 (63.95%), Postives = 117/147 (79.59%), Query Frame = 0
Query:    1 LSKRIPPEAGLGGGSANAATALFAANELAGHPASLEDLQLWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPQA--RVWLVKPNKGLSTPVVFRHLDYDQLSRVEPSHLLKQFMEEGLAEADYVNDLELPAFKAMPSLQQMKTEL 145
            L K IP +AG+GGGS +AAT LFAANEL G PA+ E L  WS +LGSDITFFLS+GTCYCTGRGE+LHPQ P  QA  +VWL+KP +GLSTP+VF+HLDY++LS  +P  LLK F ++G+  A Y+NDLE PAFKA+P L+QMK ++
Sbjct:  111 LDKLIPAQAGMGGGSGDAATTLFAANELTGCPATPEQLVAWSGDLGSDITFFLSSGTCYCTGRGEVLHPQ-PNIQAYKKVWLIKPEEGLSTPMVFKHLDYNELSSEDPLELLKSFQDKGIEGATYLNDLEPPAFKALPMLKQMKQDM 256          
BLAST of mRNA_L-elsbetiae_contig11728.1504.1 vs. uniprot
Match: A0A7S3YEW3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEW3_HETAK)

HSP 1 Score: 185 bits (469), Expect = 3.800e-55
Identity = 93/148 (62.84%), Postives = 111/148 (75.00%), Query Frame = 0
Query:    1 LSKRIPPEAGLGGGSANAATALFAANELAGHPASLEDLQLWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPQARVWLVKPNKGLSTPVVFRHLDYDQLSRVEPSHLLKQFM---EEGLAEADYVNDLELPAFKAMPSLQQMKTEL 145
            L KR+P + GLGGGS N ATA FAANEL G PA+L DL+ WSAELGSDITFF S GTCYCTGRGE+LHPQ PLP +  +LVKP +GLSTP+VF++LDY  LS  +P  +L  F    + GL  A YVNDLE PAFK MP+L ++K +L
Sbjct:  188 LDKRVPAQGGLGGGSGNCATAFFAANELCGAPAALGDLEAWSAELGSDITFFFSRGTCYCTGRGEVLHPQAPLPPSVCYLVKPEEGLSTPLVFKNLDYALLSPADPEEVLATFTGGGDRGLYGATYVNDLEPPAFKVMPALAELKADL 335          
BLAST of mRNA_L-elsbetiae_contig11728.1504.1 vs. uniprot
Match: K0R9Q3_THAOC (GHMP_kinases_C domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R9Q3_THAOC)

HSP 1 Score: 167 bits (422), Expect = 4.260e-48
Identity = 90/150 (60.00%), Postives = 110/150 (73.33%), Query Frame = 0
Query:    1 LSKRIPPEAGLGGGSANAATALFAANELAGHPASLEDLQLWSAELGSDITFFLSTGTCYCTGRGEILHP-QKPLPQ-ARVWLVKPNKGLSTPVVFRHLDYDQLSRVEPSHLLKQFMEEGLAEAD---YVNDLELPAFKAMPSLQQMKTEL 145
            L KR P +AGLGGGSANAATA++ ANEL G PA+L+ L  WS ELGSDITFFLS GT YCTGRGEI+ P   PLP  A++ +VKP+ GLSTP+VF+ LDYDQLS  +P  L   F+ +G+ E D   Y+NDLE PAF  +P L+ +K EL
Sbjct:  134 LVKRCPAQAGLGGGSANAATAMWGANELMGRPATLDQLIEWSGELGSDITFFLSRGTAYCTGRGEIMTPIDPPLPSGAKLSIVKPDLGLSTPMVFKALDYDQLSAEDPQLLCDTFLNDGVVETDDKYYINDLEQPAFDCLPELKALKEEL 283          
BLAST of mRNA_L-elsbetiae_contig11728.1504.1 vs. uniprot
Match: A0A7S2LLF5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LLF5_9STRA)

HSP 1 Score: 167 bits (422), Expect = 7.940e-48
Identity = 87/149 (58.39%), Postives = 110/149 (73.83%), Query Frame = 0
Query:    1 LSKRIPPEAGLGGGSANAATALFAANELAGHPASLEDLQLWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPQAR-VWLVKPNKGLSTPVVFRHLDYDQLSRVEPSHLLKQFMEEGLAEAD---YVNDLELPAFKAMPSLQQMKTEL 145
            L K +P +AGLGGGS NAA AL+ ANEL G PA+LE L  WS +LGSDITFFLS GT YCTGRGEI+ P  PLP  + V++VKP+ GLSTP VF+ LDYD LS ++P  +L  FM EG+  ++   +VNDLE PAFK +P L+++K +L
Sbjct:  152 LVKHVPHQAGLGGGSGNAAAALYGANELLGRPATLEQLVEWSGDLGSDITFFLSEGTAYCTGRGEIMTPVDPLPAGQTVYIVKPDIGLSTPSVFKALDYDLLSTLDPEEILNVFMTEGVTTSNQSVFVNDLEPPAFKVVPELKELKDDL 300          
BLAST of mRNA_L-elsbetiae_contig11728.1504.1 vs. uniprot
Match: A0A7S2V6H6_9STRA (4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6H6_9STRA)

HSP 1 Score: 160 bits (404), Expect = 1.140e-47
Identity = 78/130 (60.00%), Postives = 105/130 (80.77%), Query Frame = 0
Query:    1 LSKRIPPEAGLGGGSANAATALFAANELAGHPASLEDLQLWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPQARVWLVKPNKGLSTPVVFRHLDYDQLSRVEPSHLLKQFMEEGLAEADYVNDLELP 130
            L K +P +AGLGGGSANAATA+FAANEL G PAS++DL+LWSA++GSDITFF S G+CYCTGRGEIL P  P+P   V+LVKP++GL TP+VF++L+ ++ S+ +P  +L+ F  + L +A+Y+NDLE P
Sbjct:   27 LDKNVPAQAGLGGGSANAATAMFAANELTGSPASMKDLELWSADIGSDITFFFSCGSCYCTGRGEILDPVDPIPTYPVYLVKPSEGLPTPLVFKNLNLEENSKEDPLQVLETFKGD-LFKANYINDLEKP 155          
BLAST of mRNA_L-elsbetiae_contig11728.1504.1 vs. uniprot
Match: B8BTG9_THAPS (4-diphosphocytidyl-2c-methyl-d-erythritol kinase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTG9_THAPS)

HSP 1 Score: 163 bits (412), Expect = 4.190e-47
Identity = 87/150 (58.00%), Postives = 110/150 (73.33%), Query Frame = 0
Query:    1 LSKRIPPEAGLGGGSANAATALFAANELAGHPASLEDLQLWSAELGSDITFFLSTGTCYCTGRGEILHP-QKPLPQ-ARVWLVKPNKGLSTPVVFRHLDYDQLSRVEPSHLLKQFMEEGLAEAD---YVNDLELPAFKAMPSLQQMKTEL 145
            L KR+P +AGLGGGSANAATA++ ANEL G PA+L +L  WS ELGSDITFFLS GT YCTGRGE++ P   PLP  +++ +VKP+ GLSTP VF  LDY+QLS  +P  LL  F+E G+ + D   Y+NDLE PAF  +P L+ +K +L
Sbjct:   88 LFKRVPAQAGLGGGSANAATAMWGANELMGKPATLGELIEWSGELGSDITFFLSRGTAYCTGRGEVMTPIDPPLPSGSKLSIVKPDLGLSTPKVFSALDYEQLSAEDPEELLNTFLEFGVVDTDDEYYINDLEQPAFDCLPELKALKEDL 237          
BLAST of mRNA_L-elsbetiae_contig11728.1504.1 vs. uniprot
Match: A0A7S2LHJ7_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LHJ7_9STRA)

HSP 1 Score: 166 bits (420), Expect = 8.530e-47
Identity = 91/150 (60.67%), Postives = 108/150 (72.00%), Query Frame = 0
Query:    1 LSKRIPPEAGLGGGSANAATALFAANELAGHPASLEDLQLWSAELGSDITFFLSTGTCYCTGRGEILHP-QKPLPQ-ARVWLVKPNKGLSTPVVFRHLDYDQLSRVEPSHLLKQFMEEGLAEAD---YVNDLELPAFKAMPSLQQMKTEL 145
            L KR P +AGLGGGSANAATA++ ANEL G PA+LE L  WS  LGSDITFFLS GT YCTGRGEI+ P   PLP  A++ +VKPN GLSTP VF+ LDYDQLS  +P  L   F++EG+   D   Y+NDLE PAF  +P L+ +K EL
Sbjct:  139 LFKRCPAQAGLGGGSANAATAMWGANELMGRPATLEQLIEWSGALGSDITFFLSRGTAYCTGRGEIMTPIDPPLPSGAKLSIVKPNLGLSTPKVFKALDYDQLSTEDPQMLCDLFLKEGVVNTDDKYYINDLEQPAFDCLPELKALKDEL 288          
BLAST of mRNA_L-elsbetiae_contig11728.1504.1 vs. uniprot
Match: A0A7S4C8S3_9EUGL (4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4C8S3_9EUGL)

HSP 1 Score: 163 bits (413), Expect = 1.510e-45
Identity = 89/150 (59.33%), Postives = 104/150 (69.33%), Query Frame = 0
Query:    1 LSKRIPPEAGLGGGSANAATALFAANELAGHPASLEDLQLWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPQARVWLVKPNKGLSTPVVFRHLDYDQLSRVEPSHLLKQFM----EEGLAEAD-YVNDLELPAFKAMPSLQQMKTEL 145
            L K++P +AGLGGGS NAAT L+A NEL G PA+LE L  WS  LGSDITFFLS GT YCTGRGEIL P  PLP  R++L KP+ GLSTP VF+ LDY+ LS  +P  LL QF     +   A  D YVNDLE PAF+ +P L  +K EL
Sbjct:  261 LEKKVPAQAGLGGGSGNAATTLWAVNELYGRPATLEQLVEWSGALGSDITFFLSGGTAYCTGRGEILTPLPPLPPQRIYLFKPDIGLSTPAVFKALDYEALSPADPEDLLAQFQAAQPDVAAASRDIYVNDLEPPAFRLVPELAAIKEEL 410          
BLAST of mRNA_L-elsbetiae_contig11728.1504.1 vs. uniprot
Match: A0A7S0ZEF2_9RHOD (4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZEF2_9RHOD)

HSP 1 Score: 159 bits (403), Expect = 4.500e-45
Identity = 79/145 (54.48%), Postives = 105/145 (72.41%), Query Frame = 0
Query:    1 LSKRIPPEAGLGGGSANAATALFAANELAGHPASLEDLQLWSAELGSDITFFLSTGTCYCTGRGEILHPQKPLPQARVWLVKPNKGLSTPVVFRHLDYDQLSRVEPSHLLKQFMEEGLAEADYVNDLELPAFKAMPSLQQMKTEL 145
            L K +P EAGLGGGSANAA+AL+A NEL+G PA+   L  + AE GSDI+FF S GT YCTGRGEI+   + LP   +++VKPN G+ST  VFR +DY++LS+ +P  +L + +   L+ AD VNDLE P+FK MPSL ++K +L
Sbjct:  159 LEKNVPMEAGLGGGSANAASALWAINELSGRPATNAQLAEYGAEFGSDISFFFSNGTAYCTGRGEIMEEVESLPSLELYVVKPNVGMSTGAVFRAMDYNELSKTDPKKILNEVLSGNLSRADLVNDLEKPSFKLMPSLMELKKKL 303          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11728.1504.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6C7_ECTSI2.060e-8993.104-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol ... [more]
A0A835Z2M9_9STRA2.870e-5663.954-diphosphocytidyl-2c-methyl-d-erythritol kinase n... [more]
A0A7S3YEW3_HETAK3.800e-5562.84Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
K0R9Q3_THAOC4.260e-4860.00GHMP_kinases_C domain-containing protein n=1 Tax=T... [more]
A0A7S2LLF5_9STRA7.940e-4858.39Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2V6H6_9STRA1.140e-4760.004-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol ... [more]
B8BTG9_THAPS4.190e-4758.004-diphosphocytidyl-2c-methyl-d-erythritol kinase (... [more]
A0A7S2LHJ7_9STRA8.530e-4760.67Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S4C8S3_9EUGL1.510e-4559.334-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol ... [more]
A0A7S0ZEF2_9RHOD4.500e-4554.484-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006204GHMP kinase N-terminal domainPFAMPF00288GHMP_kinases_Ncoord: 2..39
e-value: 1.8E-5
score: 24.9
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 1..70
e-value: 1.6E-23
score: 85.0
IPR036554GHMP kinase, C-terminal domain superfamilyGENE3D3.30.70.890coord: 73..145
e-value: 1.5E-10
score: 43.2
IPR036554GHMP kinase, C-terminal domain superfamilySUPERFAMILY55060GHMP Kinase, C-terminal domaincoord: 73..143
IPR0044244-diphosphocytidyl-2C-methyl-D-erythritol kinasePANTHERPTHR43527:SF24-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE, CHLOROPLASTICcoord: 1..145
NoneNo IPR availablePANTHERPTHR43527FAMILY NOT NAMEDcoord: 1..145
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 2..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11728contigL-elsbetiae_contig11728:1769..2611 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11728.1504.1mRNA_L-elsbetiae_contig11728.1504.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11728 1769..2611 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11728.1504.1 ID=prot_L-elsbetiae_contig11728.1504.1|Name=mRNA_L-elsbetiae_contig11728.1504.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=145bp
LSKRIPPEAGLGGGSANAATALFAANELAGHPASLEDLQLWSAELGSDIT
FFLSTGTCYCTGRGEILHPQKPLPQARVWLVKPNKGLSTPVVFRHLDYDQ
LSRVEPSHLLKQFMEEGLAEADYVNDLELPAFKAMPSLQQMKTEL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006204GHMP_kinase_N_dom
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR036554GHMP_kinase_C_sf
IPR004424IspE
IPR020568Ribosomal_S5_D2-typ_fold