prot_L-elsbetiae_contig11693.1468.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11693.1468.1
Unique Nameprot_L-elsbetiae_contig11693.1468.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length237
Homology
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BLAST of mRNA_L-elsbetiae_contig11693.1468.1 vs. uniprot
Match: D8LCS1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCS1_ECTSI)

HSP 1 Score: 240 bits (612), Expect = 1.960e-76
Identity = 127/227 (55.95%), Postives = 166/227 (73.13%), Query Frame = 0 
Query:    1 GLVFLVVLSLLGHGDALFGRGXXXXXXXXXXXXXXXXXXXXXAAAKFDPEGLQAAASQASERVMMWGTTTIFQLKAAVQLKGQLERLQSAAGQAGD--KSLLKMDPAMYKEVMGGALGGVFLMLNSPSMGKVSDLAKALMTDQRRQVRVVDLDQKVQESFAGGKG-PTITKGPKGFLEGALLNREVAAAHNKFMADVEALSSSPLAKKVGASAEAYHDALLVYATNE 224
            GL  LV+LSLLG G+ALFGRG                     A  K DP+ ++ AA QASER++MWGTTTIFQLK A ++KG +ERLQ+++ Q     ++++KMDP MYK V+G +LG VFLMLNSP+ GK+S+ AK+++ D+ RQ+R++D+DQ+ +ESFA  KG PT  KGP+G+LEGALLN+EVAAAH KF+ADVEALSSS + KK  ASAEAYH A+L Y T+E
Sbjct:    9 GLAILVLLSLLGDGEALFGRGKGGGGAATAAKKTSRGTKGSPARTKLDPDMMETAAMQASERLLMWGTTTIFQLKEAARMKGHVERLQASSQQVDQNGRAMVKMDPPMYKAVVGSSLGNVFLMLNSPNFGKLSEKAKSMLKDEGRQMRLIDMDQRTKESFAAQKGQPTGVKGPEGYLEGALLNKEVAAAHEKFLADVEALSSSAVGKKAAASAEAYHQAMLAYTTSE 235
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11693.1468.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCS1_ECTSI1.960e-7655.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..236
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.785

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11693contigL-elsbetiae_contig11693:932..4726 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11693.1468.1mRNA_L-elsbetiae_contig11693.1468.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11693 336..4726 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11693.1468.1 ID=prot_L-elsbetiae_contig11693.1468.1|Name=mRNA_L-elsbetiae_contig11693.1468.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=237bp
GLVFLVVLSLLGHGDALFGRGKGGGGGGVGCGVSGKSSISAAAAAKFDPE
GLQAAASQASERVMMWGTTTIFQLKAAVQLKGQLERLQSAAGQAGDKSLL
KMDPAMYKEVMGGALGGVFLMLNSPSMGKVSDLAKALMTDQRRQVRVVDL
DQKVQESFAGGKGPTITKGPKGFLEGALLNREVAAAHNKFMADVEALSSS
PLAKKVGASAEAYHDALLVYATNEPAAAAASKKMKK*
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