prot_L-elsbetiae_contig1167.1447.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1167.1447.1
Unique Nameprot_L-elsbetiae_contig1167.1447.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length159
Homology
BLAST of mRNA_L-elsbetiae_contig1167.1447.1 vs. uniprot
Match: D7FSN0_ECTSI (Mitochondrial import inner membrane translocase subunit TIM16 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSN0_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 9.990e-69
Identity = 119/130 (91.54%), Postives = 125/130 (96.15%), Query Frame = 0
Query:    1 MASPFARVLAQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSRTSKLSTLEAMQILNLQKGEVKPDLIKKRYDQYFEINDPDKGGSFYLQSKVFRAKEALDEQLALQAKQAEEEAALRAKGKAAG 130
            MA+PFAR++AQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSRTSKLSTLEAMQILNLQKGE+KPDLIK+RYDQYF INDPDKGGSFYLQSKVFRAKEALDEQLALQAKQA EEAAL+AK  A G
Sbjct:    1 MANPFARIIAQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSRTSKLSTLEAMQILNLQKGEMKPDLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALDEQLALQAKQASEEAALKAKAAAGG 130          
BLAST of mRNA_L-elsbetiae_contig1167.1447.1 vs. uniprot
Match: A0A835YVS4_9STRA (Mitochondrial import inner membrane translocase subunit TIM16 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS4_9STRA)

HSP 1 Score: 139 bits (350), Expect = 3.480e-39
Identity = 76/118 (64.41%), Postives = 95/118 (80.51%), Query Frame = 0
Query:    1 MASPFARVLAQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSRTSKLSTLEAMQILNLQKGEVKPDLIKKRYDQYFEINDPDKGGSFYLQSKVFRAKEALDEQLALQAKQAEE 118
            M+ P ARV+AQL V  AGIVSRAFV+AYSQAV NARTGT +  K+M+RTSK+ST EA+Q+LNL K E+ P  I +++ +YFE NDP+KGGSFYLQSKVFRA+E+L E L L AK+ E+
Sbjct:    1 MSGPLARVIAQLMVTGAGIVSRAFVAAYSQAVQNARTGTQQQVKSMTRTSKMSTAEALQVLNLSKAEMDPTRISQQFARYFESNDPNKGGSFYLQSKVFRARESLHETLELAAKREEQ 118          
BLAST of mRNA_L-elsbetiae_contig1167.1447.1 vs. uniprot
Match: A0A7S3V4X6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V4X6_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.200e-25
Identity = 59/108 (54.63%), Postives = 78/108 (72.22%), Query Frame = 0
Query:    4 PFARVLAQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSR----TSKLSTLEAMQILNLQKGEVKPDLIKKRYDQYFEINDPDKGGSFYLQSKVFRAKEALDE 107
            P ARVLAQ AV   GI++RA  +AY  A++NAR G +++AKA S       K+S  EAMQ+LNL KG+V P  ++K++D+YF  N  +KGGSFYLQSK++RAKE LDE
Sbjct:    5 PIARVLAQAAVMGIGIMARAIPAAYGAALNNARKGGVDAAKANSEGIFGKKKISVDEAMQVLNLVKGDVSPKAVQKQFDRYFATNAVEKGGSFYLQSKIYRAKEQLDE 112          
BLAST of mRNA_L-elsbetiae_contig1167.1447.1 vs. uniprot
Match: A0A8K1CVL5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CVL5_PYTOL)

HSP 1 Score: 102 bits (255), Expect = 2.670e-25
Identity = 57/109 (52.29%), Postives = 77/109 (70.64%), Query Frame = 0
Query:    1 MASPFARVLAQLAVASAGIVSRAFVSAYSQAVHNARTGTLES--AKAMSRTSKLSTLEAMQILNLQ-KGEVKPDLIKKRYDQYFEINDPDKGGSFYLQSKVFRAKEALD 106
            M+ P  R++AQ  V  AGIVSRAFV AY QAVHNA+TG   +  +KA+ R + +   +A++ILN    G    + ++K++ +YFE NDP KGGSFYLQSK+FRAKEAL+
Sbjct:    1 MSGPLGRIIAQFVVMGAGIVSRAFVQAYQQAVHNAKTGNTAAMTSKAVKRKNVMERSQALEILNFPTSGTPSQEEVQKQFQRYFEANDPAKGGSFYLQSKIFRAKEALE 109          
BLAST of mRNA_L-elsbetiae_contig1167.1447.1 vs. uniprot
Match: M4C0R0_HYAAE (Uncharacterized protein n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C0R0_HYAAE)

HSP 1 Score: 102 bits (254), Expect = 5.590e-25
Identity = 58/110 (52.73%), Postives = 78/110 (70.91%), Query Frame = 0
Query:    1 MASPFARVLAQLAVASAGIVSRAFVSAYSQAVHNARTGTLES--AKAMSRTSKLSTLEAMQILNLQKGEVKPDL--IKKRYDQYFEINDPDKGGSFYLQSKVFRAKEALD 106
            M+ P  R++AQ+ V  AGIVS+AFV AY QAVHNAR+G   +  AK ++   K+S  +A++ILN     V P    I+K++ +YFE NDP KGGSFYLQSK++RAKEAL+
Sbjct:    1 MSGPLGRIIAQVVVMGAGIVSKAFVQAYQQAVHNARSGNAGTVAAKTVAGKKKMSKQQALEILNFPTSGVVPSTEDIQKQFTRYFEANDPAKGGSFYLQSKIYRAKEALE 110          
BLAST of mRNA_L-elsbetiae_contig1167.1447.1 vs. uniprot
Match: A0A0P1AYF2_PLAHL (Mitochondrial import inner membrane translocase subunit tim16 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AYF2_PLAHL)

HSP 1 Score: 99.4 bits (246), Expect = 5.900e-24
Identity = 56/112 (50.00%), Postives = 79/112 (70.54%), Query Frame = 0
Query:    1 MASPFARVLAQLAVASAGIVSRAFVSAYSQAVHNARTGTLES--AKAMSRTSKLSTLEAMQILNLQKGEVKPDL--IKKRYDQYFEINDPDKGGSFYLQSKVFRAKEALDEQ 108
            M+ P  R++AQ+ V  AGIVS+AFV AY QAV NAR+G   +   KA+ R +++ST +A +ILN       P L  +++++ +YFE NDP KGGSFY+QSK++RAKEAL+ Q
Sbjct:    1 MSGPLGRIIAQVVVMGAGIVSKAFVHAYQQAVQNARSGNAAAMKTKAVVRKNQMSTQQAREILNFPVSGPAPSLEDVQRQFKRYFEANDPAKGGSFYIQSKIYRAKEALERQ 112          
BLAST of mRNA_L-elsbetiae_contig1167.1447.1 vs. uniprot
Match: A0A2D4C867_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C867_PYTIN)

HSP 1 Score: 99.4 bits (246), Expect = 5.900e-24
Identity = 56/110 (50.91%), Postives = 76/110 (69.09%), Query Frame = 0
Query:    1 MASPFARVLAQLAVASAGIVSRAFVSAYSQAVHNARTGT---LESAKAMSRTSKLSTLEAMQILNLQKGEVKP-DLIKKRYDQYFEINDPDKGGSFYLQSKVFRAKEALD 106
            M+ P  RV+AQ+ V  AGIVSRAFV AY QAVHNA+TG    + +  A+ R + +   +A++ILN         + ++K++ +YFE NDP KGGSFYLQSK+FRAKEAL+
Sbjct:    1 MSGPLGRVIAQVIVMGAGIVSRAFVQAYQQAVHNAKTGNTAAMTAKTAIKRKNVMPRTQALEILNFPTSATPTTEXVQKQFQRYFEANDPAKGGSFYLQSKIFRAKEALE 110          
BLAST of mRNA_L-elsbetiae_contig1167.1447.1 vs. uniprot
Match: D0NVB8_PHYIT (Uncharacterized protein n=16 Tax=Phytophthora TaxID=4783 RepID=D0NVB8_PHYIT)

HSP 1 Score: 99.0 bits (245), Expect = 9.870e-24
Identity = 57/110 (51.82%), Postives = 77/110 (70.00%), Query Frame = 0
Query:    1 MASPFARVLAQLAVASAGIVSRAFVSAYSQAVHNARTGTLES--AKAMSRTSKLSTLEAMQILNLQKGEVKP--DLIKKRYDQYFEINDPDKGGSFYLQSKVFRAKEALD 106
            M+ P  R++AQ+ V  AGIVS+AFV AY QAVHNAR+G   +  AK + R +++   +A +ILN       P  + I+K++ +YFE NDP KGGSFYLQSK+FRAKEAL+
Sbjct:    1 MSGPLGRIIAQVVVMGAGIVSKAFVQAYQQAVHNARSGNAGAMAAKTVVRKNQMPKQQAREILNFPTSGPAPSSEEIQKQFTRYFEANDPAKGGSFYLQSKIFRAKEALE 110          
BLAST of mRNA_L-elsbetiae_contig1167.1447.1 vs. uniprot
Match: A0A5D6XKL2_9STRA (EF-hand domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKL2_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.880e-23
Identity = 60/115 (52.17%), Postives = 82/115 (71.30%), Query Frame = 0
Query:    1 MASPFARVLAQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSRTSK----LSTLEAMQILNLQKG-EVKPDLIKKRYDQYFEINDPDKGGSFYLQSKVFRAKEALDEQLA 110
            M+ P ARV+AQ+ V +AG+VSRAFV+AY QAVHNA++G   +A A    ++    +S  +A++ILN       KPD + K++ +YFE NDP KGGSFYLQSK+FRAKEAL+ + A
Sbjct:  361 MSGPIARVIAQVVVMTAGVVSRAFVTAYQQAVHNAKSGNTAAAMAAKPAARAKNVMSREQALEILNFPTAAHPKPDEVAKQFTRYFEANDPAKGGSFYLQSKIFRAKEALEREQA 475          
BLAST of mRNA_L-elsbetiae_contig1167.1447.1 vs. uniprot
Match: W7TWQ8_9STRA (Mitochondrial import inner membrane translocase subunit tim16 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWQ8_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 7.350e-23
Identity = 57/108 (52.78%), Postives = 79/108 (73.15%), Query Frame = 0
Query:    1 MASPFARVLAQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSRT-SKLSTLEAMQILNLQKGEVKPDL-IKKRYDQYFEINDPDKGGSFYLQSKVFRAKEALD 106
            M+ PF R+L  +AV SA + SRAFV+AY QA+ NA+ G   +AKA SRT   ++  EA+++LNLQK ++K    I +++D+YF  N+P KGGSFYLQSKV+RAKE L+
Sbjct:    1 MSGPFVRMLVNIAVMSASVFSRAFVAAYHQALQNAKQGGGTAAKAASRTYGGMAPDEALKVLNLQKTDLKSSARIIEQFDKYFSQNEPGKGGSFYLQSKVYRAKECLE 108          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1167.1447.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSN0_ECTSI9.990e-6991.54Mitochondrial import inner membrane translocase su... [more]
A0A835YVS4_9STRA3.480e-3964.41Mitochondrial import inner membrane translocase su... [more]
A0A7S3V4X6_9STRA1.200e-2554.63Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A8K1CVL5_PYTOL2.670e-2552.29Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
M4C0R0_HYAAE5.590e-2552.73Uncharacterized protein n=2 Tax=Hyaloperonospora a... [more]
A0A0P1AYF2_PLAHL5.900e-2450.00Mitochondrial import inner membrane translocase su... [more]
A0A2D4C867_PYTIN5.900e-2450.91Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
D0NVB8_PHYIT9.870e-2451.82Uncharacterized protein n=16 Tax=Phytophthora TaxI... [more]
A0A5D6XKL2_9STRA1.880e-2352.17EF-hand domain-containing protein n=1 Tax=Pythium ... [more]
W7TWQ8_9STRA7.350e-2352.78Mitochondrial import inner membrane translocase su... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF03656Pam16coord: 7..120
e-value: 6.7E-27
score: 94.0
NoneNo IPR availablePANTHERPTHR12388:SF0MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM16coord: 6..120
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..158
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.455
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110coord: 52..114
e-value: 2.5E-24
score: 86.4
IPR036869Chaperone J-domain superfamilySUPERFAMILY46565Chaperone J-domaincoord: 50..108
IPR005341Mitochondrial import inner membrane translocase subunit Tim16PANTHERPTHR12388MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULEcoord: 6..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1167contigL-elsbetiae_contig1167:24571..27384 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1167.1447.1mRNA_L-elsbetiae_contig1167.1447.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1167 24571..27384 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1167.1447.1 ID=prot_L-elsbetiae_contig1167.1447.1|Name=mRNA_L-elsbetiae_contig1167.1447.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=159bp
MASPFARVLAQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSRTS
KLSTLEAMQILNLQKGEVKPDLIKKRYDQYFEINDPDKGGSFYLQSKVFR
AKEALDEQLALQAKQAEEEAALRAKGKAAGGGEGKAGGGARGAGAGAGAR
RTSTGRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036869J_dom_sf
IPR005341Tim16