mRNA_L-elsbetiae_contig1167.1447.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1167.1447.1 vs. uniprot
Match: D7FSN0_ECTSI (Mitochondrial import inner membrane translocase subunit TIM16 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSN0_ECTSI) HSP 1 Score: 214 bits (544), Expect = 9.990e-69 Identity = 119/130 (91.54%), Postives = 125/130 (96.15%), Query Frame = 1 Query: 1 MASPFARVLAQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSRTSKLSTLEAMQILNLQKGEVKPDLIKKRYDQYFEINDPDKGGSFYLQSKVFRAKEALDEQLALQAKQAEEEAALRAKGKAAG 390 MA+PFAR++AQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSRTSKLSTLEAMQILNLQKGE+KPDLIK+RYDQYF INDPDKGGSFYLQSKVFRAKEALDEQLALQAKQA EEAAL+AK A G Sbjct: 1 MANPFARIIAQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSRTSKLSTLEAMQILNLQKGEMKPDLIKQRYDQYFGINDPDKGGSFYLQSKVFRAKEALDEQLALQAKQASEEAALKAKAAAGG 130
BLAST of mRNA_L-elsbetiae_contig1167.1447.1 vs. uniprot
Match: A0A835YVS4_9STRA (Mitochondrial import inner membrane translocase subunit TIM16 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVS4_9STRA) HSP 1 Score: 139 bits (350), Expect = 3.480e-39 Identity = 76/118 (64.41%), Postives = 95/118 (80.51%), Query Frame = 1 Query: 1 MASPFARVLAQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSRTSKLSTLEAMQILNLQKGEVKPDLIKKRYDQYFEINDPDKGGSFYLQSKVFRAKEALDEQLALQAKQAEE 354 M+ P ARV+AQL V AGIVSRAFV+AYSQAV NARTGT + K+M+RTSK+ST EA+Q+LNL K E+ P I +++ +YFE NDP+KGGSFYLQSKVFRA+E+L E L L AK+ E+ Sbjct: 1 MSGPLARVIAQLMVTGAGIVSRAFVAAYSQAVQNARTGTQQQVKSMTRTSKMSTAEALQVLNLSKAEMDPTRISQQFARYFESNDPNKGGSFYLQSKVFRARESLHETLELAAKREEQ 118
BLAST of mRNA_L-elsbetiae_contig1167.1447.1 vs. uniprot
Match: A0A7S3V4X6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V4X6_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.200e-25 Identity = 59/108 (54.63%), Postives = 78/108 (72.22%), Query Frame = 1 Query: 10 PFARVLAQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSR----TSKLSTLEAMQILNLQKGEVKPDLIKKRYDQYFEINDPDKGGSFYLQSKVFRAKEALDE 321 P ARVLAQ AV GI++RA +AY A++NAR G +++AKA S K+S EAMQ+LNL KG+V P ++K++D+YF N +KGGSFYLQSK++RAKE LDE Sbjct: 5 PIARVLAQAAVMGIGIMARAIPAAYGAALNNARKGGVDAAKANSEGIFGKKKISVDEAMQVLNLVKGDVSPKAVQKQFDRYFATNAVEKGGSFYLQSKIYRAKEQLDE 112
BLAST of mRNA_L-elsbetiae_contig1167.1447.1 vs. uniprot
Match: A0A8K1CVL5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CVL5_PYTOL) HSP 1 Score: 102 bits (255), Expect = 2.670e-25 Identity = 57/109 (52.29%), Postives = 77/109 (70.64%), Query Frame = 1 Query: 1 MASPFARVLAQLAVASAGIVSRAFVSAYSQAVHNARTGTLES--AKAMSRTSKLSTLEAMQILNLQ-KGEVKPDLIKKRYDQYFEINDPDKGGSFYLQSKVFRAKEALD 318 M+ P R++AQ V AGIVSRAFV AY QAVHNA+TG + +KA+ R + + +A++ILN G + ++K++ +YFE NDP KGGSFYLQSK+FRAKEAL+ Sbjct: 1 MSGPLGRIIAQFVVMGAGIVSRAFVQAYQQAVHNAKTGNTAAMTSKAVKRKNVMERSQALEILNFPTSGTPSQEEVQKQFQRYFEANDPAKGGSFYLQSKIFRAKEALE 109
BLAST of mRNA_L-elsbetiae_contig1167.1447.1 vs. uniprot
Match: M4C0R0_HYAAE (Uncharacterized protein n=2 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C0R0_HYAAE) HSP 1 Score: 102 bits (254), Expect = 5.590e-25 Identity = 58/110 (52.73%), Postives = 78/110 (70.91%), Query Frame = 1 Query: 1 MASPFARVLAQLAVASAGIVSRAFVSAYSQAVHNARTGTLES--AKAMSRTSKLSTLEAMQILNLQKGEVKPDL--IKKRYDQYFEINDPDKGGSFYLQSKVFRAKEALD 318 M+ P R++AQ+ V AGIVS+AFV AY QAVHNAR+G + AK ++ K+S +A++ILN V P I+K++ +YFE NDP KGGSFYLQSK++RAKEAL+ Sbjct: 1 MSGPLGRIIAQVVVMGAGIVSKAFVQAYQQAVHNARSGNAGTVAAKTVAGKKKMSKQQALEILNFPTSGVVPSTEDIQKQFTRYFEANDPAKGGSFYLQSKIYRAKEALE 110
BLAST of mRNA_L-elsbetiae_contig1167.1447.1 vs. uniprot
Match: A0A0P1AYF2_PLAHL (Mitochondrial import inner membrane translocase subunit tim16 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AYF2_PLAHL) HSP 1 Score: 99.4 bits (246), Expect = 5.900e-24 Identity = 56/112 (50.00%), Postives = 79/112 (70.54%), Query Frame = 1 Query: 1 MASPFARVLAQLAVASAGIVSRAFVSAYSQAVHNARTGTLES--AKAMSRTSKLSTLEAMQILNLQKGEVKPDL--IKKRYDQYFEINDPDKGGSFYLQSKVFRAKEALDEQ 324 M+ P R++AQ+ V AGIVS+AFV AY QAV NAR+G + KA+ R +++ST +A +ILN P L +++++ +YFE NDP KGGSFY+QSK++RAKEAL+ Q Sbjct: 1 MSGPLGRIIAQVVVMGAGIVSKAFVHAYQQAVQNARSGNAAAMKTKAVVRKNQMSTQQAREILNFPVSGPAPSLEDVQRQFKRYFEANDPAKGGSFYIQSKIYRAKEALERQ 112
BLAST of mRNA_L-elsbetiae_contig1167.1447.1 vs. uniprot
Match: A0A2D4C867_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C867_PYTIN) HSP 1 Score: 99.4 bits (246), Expect = 5.900e-24 Identity = 56/110 (50.91%), Postives = 76/110 (69.09%), Query Frame = 1 Query: 1 MASPFARVLAQLAVASAGIVSRAFVSAYSQAVHNARTGT---LESAKAMSRTSKLSTLEAMQILNLQKGEVKP-DLIKKRYDQYFEINDPDKGGSFYLQSKVFRAKEALD 318 M+ P RV+AQ+ V AGIVSRAFV AY QAVHNA+TG + + A+ R + + +A++ILN + ++K++ +YFE NDP KGGSFYLQSK+FRAKEAL+ Sbjct: 1 MSGPLGRVIAQVIVMGAGIVSRAFVQAYQQAVHNAKTGNTAAMTAKTAIKRKNVMPRTQALEILNFPTSATPTTEXVQKQFQRYFEANDPAKGGSFYLQSKIFRAKEALE 110
BLAST of mRNA_L-elsbetiae_contig1167.1447.1 vs. uniprot
Match: D0NVB8_PHYIT (Uncharacterized protein n=16 Tax=Phytophthora TaxID=4783 RepID=D0NVB8_PHYIT) HSP 1 Score: 99.0 bits (245), Expect = 9.870e-24 Identity = 57/110 (51.82%), Postives = 77/110 (70.00%), Query Frame = 1 Query: 1 MASPFARVLAQLAVASAGIVSRAFVSAYSQAVHNARTGTLES--AKAMSRTSKLSTLEAMQILNLQKGEVKP--DLIKKRYDQYFEINDPDKGGSFYLQSKVFRAKEALD 318 M+ P R++AQ+ V AGIVS+AFV AY QAVHNAR+G + AK + R +++ +A +ILN P + I+K++ +YFE NDP KGGSFYLQSK+FRAKEAL+ Sbjct: 1 MSGPLGRIIAQVVVMGAGIVSKAFVQAYQQAVHNARSGNAGAMAAKTVVRKNQMPKQQAREILNFPTSGPAPSSEEIQKQFTRYFEANDPAKGGSFYLQSKIFRAKEALE 110
BLAST of mRNA_L-elsbetiae_contig1167.1447.1 vs. uniprot
Match: A0A5D6XKL2_9STRA (EF-hand domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKL2_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.880e-23 Identity = 60/115 (52.17%), Postives = 82/115 (71.30%), Query Frame = 1 Query: 1 MASPFARVLAQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSRTSK----LSTLEAMQILNLQKG-EVKPDLIKKRYDQYFEINDPDKGGSFYLQSKVFRAKEALDEQLA 330 M+ P ARV+AQ+ V +AG+VSRAFV+AY QAVHNA++G +A A ++ +S +A++ILN KPD + K++ +YFE NDP KGGSFYLQSK+FRAKEAL+ + A Sbjct: 361 MSGPIARVIAQVVVMTAGVVSRAFVTAYQQAVHNAKSGNTAAAMAAKPAARAKNVMSREQALEILNFPTAAHPKPDEVAKQFTRYFEANDPAKGGSFYLQSKIFRAKEALEREQA 475
BLAST of mRNA_L-elsbetiae_contig1167.1447.1 vs. uniprot
Match: W7TWQ8_9STRA (Mitochondrial import inner membrane translocase subunit tim16 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWQ8_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 7.350e-23 Identity = 57/108 (52.78%), Postives = 79/108 (73.15%), Query Frame = 1 Query: 1 MASPFARVLAQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSRT-SKLSTLEAMQILNLQKGEVKPDL-IKKRYDQYFEINDPDKGGSFYLQSKVFRAKEALD 318 M+ PF R+L +AV SA + SRAFV+AY QA+ NA+ G +AKA SRT ++ EA+++LNLQK ++K I +++D+YF N+P KGGSFYLQSKV+RAKE L+ Sbjct: 1 MSGPFVRMLVNIAVMSASVFSRAFVAAYHQALQNAKQGGGTAAKAASRTYGGMAPDEALKVLNLQKTDLKSSARIIEQFDKYFSQNEPGKGGSFYLQSKVYRAKECLE 108 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1167.1447.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1167.1447.1 >prot_L-elsbetiae_contig1167.1447.1 ID=prot_L-elsbetiae_contig1167.1447.1|Name=mRNA_L-elsbetiae_contig1167.1447.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=159bp MASPFARVLAQLAVASAGIVSRAFVSAYSQAVHNARTGTLESAKAMSRTSback to top mRNA from alignment at L-elsbetiae_contig1167:24571..27384+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1167.1447.1 ID=mRNA_L-elsbetiae_contig1167.1447.1|Name=mRNA_L-elsbetiae_contig1167.1447.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2814bp|location=Sequence derived from alignment at L-elsbetiae_contig1167:24571..27384+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1167:24571..27384+ >mRNA_L-elsbetiae_contig1167.1447.1 ID=mRNA_L-elsbetiae_contig1167.1447.1|Name=mRNA_L-elsbetiae_contig1167.1447.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=954bp|location=Sequence derived from alignment at L-elsbetiae_contig1167:24571..27384+ (Laminarionema elsbetiae ELsaHSoW15)back to top |