prot_L-elsbetiae_contig1160.1388.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1160.1388.1
Unique Nameprot_L-elsbetiae_contig1160.1388.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length119
Homology
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BLAST of mRNA_L-elsbetiae_contig1160.1388.1 vs. uniprot
Match: D7FLG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLG3_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 1.130e-29
Identity = 68/84 (80.95%), Postives = 76/84 (90.48%), Query Frame = 0 
Query:    1 SKKARQALEEEEKVARGLRWELEDRQQMAAAESEEAAKKVLELESKCEGALSSGEERLREVLGSLHAVEKAFVQHKDRQRSEEQ 84
            SKK RQALE EEKV+RGLRWELEDRQQ+AAAE+EEAA++  ELE++ E A+ SGEERLREVLGSLHAVEKAFVQHKDRQR EEQ
Sbjct:  345 SKKFRQALEAEEKVSRGLRWELEDRQQIAAAENEEAARRAGELENEYEAAVCSGEERLREVLGSLHAVEKAFVQHKDRQRLEEQ 428
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BLAST of mRNA_L-elsbetiae_contig1160.1388.1 vs. uniprot
Match: A0A8K1CMT4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMT4_PYTOL)

HSP 1 Score: 51.2 bits (121), Expect = 5.580e-5
Identity = 32/84 (38.10%), Postives = 50/84 (59.52%), Query Frame = 0 
Query:    8 LEEEEKVARGLRWELEDRQQMAAAESEEAAKKVLELESKCEGALSSGEERLREVLGSLHAVEKAFVQHKDRQRSEEQVFLRKEE 91
            L E EK A+ + W+L D +    A+  E   ++L+L+   +  L   E ++ E+L SLH+VEKAFVQ K +   + Q F+RK+E
Sbjct:  260 LNESEKEAKAMEWQLSDVRASKDAKIAELEDEILKLQEVKQSLLDEYEGKMAELLQSLHSVEKAFVQQKAQYEDDLQRFIRKKE 343
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1160.1388.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLG3_ECTSI1.130e-2980.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8K1CMT4_PYTOL5.580e-538.10Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 90..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1160contigL-elsbetiae_contig1160:2929..5611 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1160.1388.1mRNA_L-elsbetiae_contig1160.1388.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1160 2928..5611 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1160.1388.1 ID=prot_L-elsbetiae_contig1160.1388.1|Name=mRNA_L-elsbetiae_contig1160.1388.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=119bp
SKKARQALEEEEKVARGLRWELEDRQQMAAAESEEAAKKVLELESKCEGA
LSSGEERLREVLGSLHAVEKAFVQHKDRQRSEEQVFLRKEEELRSALEAC
RARTADLERAVSEGAQREE
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