prot_L-elsbetiae_contig11559.1358.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11559.1358.1
Unique Nameprot_L-elsbetiae_contig11559.1358.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length222
Homology
BLAST of mRNA_L-elsbetiae_contig11559.1358.1 vs. uniprot
Match: D7FY04_ECTSI (Putative regulatory protein cII n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY04_ECTSI)

HSP 1 Score: 352 bits (903), Expect = 4.440e-117
Identity = 165/220 (75.00%), Postives = 188/220 (85.45%), Query Frame = 0
Query:    3 GALFLLPGHEGIVDYDQKVTVAYGTNLMVEAAAPGAWNKLMALTARKCGADIVLVDCSPHRGKLNMHIILTSDYLFVPCAPDTYSHNAIKALPAIMKDWIITRHSARNTATHNGLAADVQILAGNPRILGVSVMRYTQMKNQPARNFGFWMGRIESALHEISEKIHGMPALEGMAGTPGEPDTQPSILVKVPDFNRLAALSHYYGLPVIALGPPLMGRWD 222
            G LFLLPGHEG+VDY+QKVTVAYGTNL+VEA APGAWNKLMALTAR CGADIVLVDC+PHRGKLNMHIILTSDYLF+PC PDTY HNAIKALP IM DW+ TR +ARNTA+H GLA DVQI   NPRILG+SV RYT ++++PA+NF +WM RIES L EIS+ +H +  L GMAGTPG+PDT PSIL KVP+FN+ +ALSH+YGLPVIALG  LM  WD
Sbjct:  154 GGLFLLPGHEGLVDYEQKVTVAYGTNLLVEAIAPGAWNKLMALTARSCGADIVLVDCNPHRGKLNMHIILTSDYLFLPCTPDTYCHNAIKALPFIMADWVTTRFNARNTASHAGLARDVQIPKDNPRILGISVNRYTHIRSKPAKNFRYWMTRIESQLREISQDMHKIQGLAGMAGTPGQPDTWPSILAKVPEFNQFSALSHFYGLPVIALGANLMSVWD 373          
BLAST of mRNA_L-elsbetiae_contig11559.1358.1 vs. uniprot
Match: D7FY09_ECTSI (Putative regulatory protein cII n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY09_ECTSI)

HSP 1 Score: 350 bits (897), Expect = 1.630e-112
Identity = 163/220 (74.09%), Postives = 189/220 (85.91%), Query Frame = 0
Query:    3 GALFLLPGHEGIVDYDQKVTVAYGTNLMVEAAAPGAWNKLMALTARKCGADIVLVDCSPHRGKLNMHIILTSDYLFVPCAPDTYSHNAIKALPAIMKDWIITRHSARNTATHNGLAADVQILAGNPRILGVSVMRYTQMKNQPARNFGFWMGRIESALHEISEKIHGMPALEGMAGTPGEPDTQPSILVKVPDFNRLAALSHYYGLPVIALGPPLMGRWD 222
            G LFLLPGHEG+VDY+QKVTVAYGTNL+VEA APGAWNKLMALTAR CGADIVLVDC+PHRGKLNMHIILTSDYLF+PC P+TY HNAIKALP IM DW+ TR +ARNTA+H GLA DVQI   NPRILG+SV RYT ++++PA+NF +WM RIE+ L EIS+ +H +  L GMAGTPG+PDT PSIL KVP+FN+ +ALSH+YGLPVIALG  LMG W+
Sbjct:  475 GGLFLLPGHEGLVDYEQKVTVAYGTNLLVEAIAPGAWNKLMALTARSCGADIVLVDCNPHRGKLNMHIILTSDYLFLPCTPETYCHNAIKALPFIMADWVTTRFNARNTASHAGLARDVQIPKDNPRILGISVNRYTHIRSKPAKNFRYWMTRIENQLREISQDMHKIQGLAGMAGTPGQPDTWPSILAKVPEFNQFSALSHFYGLPVIALGANLMGVWN 694          
BLAST of mRNA_L-elsbetiae_contig11559.1358.1 vs. uniprot
Match: UPI00156D48D6 (AAA family ATPase n=1 Tax=Dorea formicigenerans TaxID=39486 RepID=UPI00156D48D6)

HSP 1 Score: 98.6 bits (244), Expect = 8.420e-21
Identity = 71/217 (32.72%), Postives = 101/217 (46.54%), Query Frame = 0
Query:    5 LFLLPGHEGIVDYDQKVTVAY----GTNLMVEAAAPGAWNKLMALTARKCGADIVLVDCSPHRGKLNMHIILTSDYLFVPCAPDTYSHNAIKALPAIMKDWIITRHSARNTATHNGLAADVQILAGNPRILGVSVMRYTQMKNQPARNFGFWMGRIESALHEISEKIHGMPALEGMAGTP---GEPDTQPSI-LVKVPDFNRLAALSHYYGLPVIAL 213
            LFLLPGH    ++D    +A       NLM     PGA+ K++ LTA++   DIVLVD SP     N +I++ SDY  VPCAPD + + AI +L  I   W IT    ++       +A  ++    P  LG+   RY      P + F  W+  I      +  K+  +P L      P   G  + + S  L  + DFN L A S  + +PV  L
Sbjct:   97 LFLLPGHVQFAEFDTTYNIAETMTGSLNLMKNV--PGAFRKMLELTAKEYKIDIVLVDMSPSISATNSNILMQSDYFIVPCAPDYFCYMAINSLLTIFPKWEITYKKMQDNDVFQ--SATYKMKNTPPIFLGILHQRYRPRNGSPVKAFAEWINDINDL---VDSKL--VPVLREHNMLPKQLGSNNYEESYNLCNIADFNSLIAQSQEHNVPVFLL 304          
BLAST of mRNA_L-elsbetiae_contig11559.1358.1 vs. uniprot
Match: A0A6N7HJG8_9PSEU (AAA family ATPase n=1 Tax=Actinophytocola sp. TaxID=1872138 RepID=A0A6N7HJG8_9PSEU)

HSP 1 Score: 66.6 bits (161), Expect = 2.320e-9
Identity = 55/223 (24.66%), Postives = 99/223 (44.39%), Query Frame = 0
Query:    1 GDGALFLLPGHEGIVDYDQKVTVAYGTNLMVEAAA---PGAWNKLMALTARKCGADIVLVDCSPHRGKLNMHIILTSDYLFVPCAPDTYSHNAIKALPAIMKDWIITRHSARNTATHNGLAADVQILAGNPRILGVSVMRYTQMKNQPARNFGFWMGRIE-----SALHEISEKIHGMPALEGMAGTPGEPDTQPSILVKVPDFNRLAALSHYYGLPVIALGP 215
            GD  L LL G   +  ++  ++ A+   L  +  A     A+ +++   A    AD+VLVD  P  G +N  +++ SD++ +P APD +S   ++ L   +  W   R        H     D+ + AG+  ++G  VM +    ++P + +  W+  I      S L + +E++   PA          P+T P  L ++  +  L  L+     P+ AL P
Sbjct:   92 GDDRLVLLAGDLELSSFEDDLSGAWPECLDGKPRAFRVMSAFWRVLNDAASSHEADVVLVDVGPSLGAINRGVLVASDHVVLPVAPDLFSLQGLRNLGPTLAGW---RSGWAERRKHG--PPDLAVPAGDMAVVGYVVMGHAVRLDRPVKAYQRWLAEIPGEFRGSVLRQATEQV---PA----------PETDPYCLAQLKHYRSLMPLAQEARKPMFALKP 296          
BLAST of mRNA_L-elsbetiae_contig11559.1358.1 vs. uniprot
Match: UPI0005850885 (ParA family protein n=1 Tax=Pseudoxanthomonas sp. GW2 TaxID=1211114 RepID=UPI0005850885)

HSP 1 Score: 61.6 bits (148), Expect = 1.300e-7
Identity = 44/165 (26.67%), Postives = 74/165 (44.85%), Query Frame = 0
Query:   51 GADIVLVDCSPHRGKLNMHIILTSDYLFVPCAPDTYSHNAIKALPAIMKDWIITRHSARNTATHNGLAADVQILAGNPRILGVSVMRYT-QMKNQPARNFGFWMGRIESALHEISEKIHGMPALEGMAGTPGEPDTQPSILVKVPDFNRLAALSHYYGLPVIALG 214
            G D +L D  P  G +   +IL+ D +F+P APD +SH AI  + AIM +W+    +  +T    GL+A +      P   G  V  Y  Q   +   ++  W   I+ A+  I+  + G    +G+     E   +P I   + D   +A ++   G  +  +G
Sbjct:  149 GFDYILCDVGPSAGSITRMVILSCDGIFIPTAPDRFSHQAILGMGAIMTEWLTRHRAILSTFAPFGLSASLV----EPVFYGAVVNNYKIQRAGRKKNSYLKWESLIKEAI--INNLLDG----KGLKPVAPEVKIEPFI-ASIRDVGPMAPVAQMVGKAIFDIG 302          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11559.1358.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FY04_ECTSI4.440e-11775.00Putative regulatory protein cII n=2 Tax=Ectocarpus... [more]
D7FY09_ECTSI1.630e-11274.09Putative regulatory protein cII n=1 Tax=Ectocarpus... [more]
UPI00156D48D68.420e-2132.72AAA family ATPase n=1 Tax=Dorea formicigenerans Ta... [more]
A0A6N7HJG8_9PSEU2.320e-924.66AAA family ATPase n=1 Tax=Actinophytocola sp. TaxI... [more]
UPI00058508851.300e-726.67ParA family protein n=1 Tax=Pseudoxanthomonas sp. ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025669AAA domainPFAMPF13614AAA_31coord: 51..98
e-value: 3.5E-7
score: 30.3
NoneNo IPR availableGENE3D3.40.50.300coord: 1..196
e-value: 3.7E-20
score: 74.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 37..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11559contigL-elsbetiae_contig11559:1562..2227 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11559.1358.1mRNA_L-elsbetiae_contig11559.1358.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11559 1562..2227 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11559.1358.1 ID=prot_L-elsbetiae_contig11559.1358.1|Name=mRNA_L-elsbetiae_contig11559.1358.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=222bp
GDGALFLLPGHEGIVDYDQKVTVAYGTNLMVEAAAPGAWNKLMALTARKC
GADIVLVDCSPHRGKLNMHIILTSDYLFVPCAPDTYSHNAIKALPAIMKD
WIITRHSARNTATHNGLAADVQILAGNPRILGVSVMRYTQMKNQPARNFG
FWMGRIESALHEISEKIHGMPALEGMAGTPGEPDTQPSILVKVPDFNRLA
ALSHYYGLPVIALGPPLMGRWD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025669AAA_dom
IPR027417P-loop_NTPase