prot_L-elsbetiae_contig11531.1344.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11531.1344.1
Unique Nameprot_L-elsbetiae_contig11531.1344.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length73
Homology
BLAST of mRNA_L-elsbetiae_contig11531.1344.1 vs. uniprot
Match: D7FWX1_ECTSI (RNA-binding protein SiahBP n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWX1_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 7.560e-36
Identity = 65/73 (89.04%), Postives = 71/73 (97.26%), Query Frame = 0
Query:    1 RLYLGSLHYELKESDIRAIFGNFGALKLVDMSHDASTGRHKGFCFIEYVDVRAADAALRAMNGFELAGRAIKV 73
            R+Y+GSLHYELKESDI +IF NFGALKLVDMSHD+STGRHKGFCFIEYVDV++ADAALRAMNGFELAGRAIKV
Sbjct:  288 RIYVGSLHYELKESDITSIFANFGALKLVDMSHDSSTGRHKGFCFIEYVDVKSADAALRAMNGFELAGRAIKV 360          
BLAST of mRNA_L-elsbetiae_contig11531.1344.1 vs. uniprot
Match: A0A836CC18_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC18_9STRA)

HSP 1 Score: 108 bits (269), Expect = 5.820e-26
Identity = 50/73 (68.49%), Postives = 63/73 (86.30%), Query Frame = 0
Query:    1 RLYLGSLHYELKESDIRAIFGNFGALKLVDMSHDASTGRHKGFCFIEYVDVRAADAALRAMNGFELAGRAIKV 73
            R+Y+GSL+YEL+ESDI AIFG FG ++ VDMS D +TG+HKGFCFIEY++  +A+AAL +MNGFELAGR IKV
Sbjct:  120 RIYIGSLYYELQESDILAIFGAFGQIRAVDMSKDPATGKHKGFCFIEYMEPASAEAALNSMNGFELAGRPIKV 192          
BLAST of mRNA_L-elsbetiae_contig11531.1344.1 vs. uniprot
Match: A0A7S2WU02_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WU02_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.030e-22
Identity = 47/73 (64.38%), Postives = 59/73 (80.82%), Query Frame = 0
Query:    1 RLYLGSLHYELKESDIRAIFGNFGALKLVDMSHDASTGRHKGFCFIEYVDVRAADAALRAMNGFELAGRAIKV 73
            R+Y+GSL+Y+L E DIR +FG+FG +  V MS + +TG+HKGFCFIEY +  AAD AL+AMNGFELAGR IKV
Sbjct:  139 RIYVGSLNYDLTEVDIRNVFGSFGNIIDVTMSFEPATGKHKGFCFIEYDNTPAADQALQAMNGFELAGRPIKV 211          
BLAST of mRNA_L-elsbetiae_contig11531.1344.1 vs. uniprot
Match: A0A7S2AH99_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AH99_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 3.050e-20
Identity = 43/73 (58.90%), Postives = 57/73 (78.08%), Query Frame = 0
Query:    1 RLYLGSLHYELKESDIRAIFGNFGALKLVDMSHDASTGRHKGFCFIEYVDVRAADAALRAMNGFELAGRAIKV 73
            R+Y+GSLHY+L E DIR +F  FG +  V MS++ +TG+ KG+CFIEY +  +A+ AL+AMNGFELAGR IKV
Sbjct:  112 RIYVGSLHYDLAEHDIRGVFEAFGKITEVTMSYEPATGKSKGYCFIEYENPNSANQALQAMNGFELAGRQIKV 184          
BLAST of mRNA_L-elsbetiae_contig11531.1344.1 vs. uniprot
Match: A0A433QFW3_9FUNG (Uncharacterized protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QFW3_9FUNG)

HSP 1 Score: 90.1 bits (222), Expect = 3.350e-20
Identity = 41/73 (56.16%), Postives = 56/73 (76.71%), Query Frame = 0
Query:    1 RLYLGSLHYELKESDIRAIFGNFGALKLVDMSHDASTGRHKGFCFIEYVDVRAADAALRAMNGFELAGRAIKV 73
            R+Y+GS+++EL E+ I+A+FG FG++K V MS D +TG+HKGFCFIE+    AA  AL AMNG +L GR +KV
Sbjct:  131 RIYVGSINFELNEAHIKAVFGQFGSIKSVSMSVDPATGKHKGFCFIEFETPEAAAMALEAMNGADLGGRQLKV 203          
BLAST of mRNA_L-elsbetiae_contig11531.1344.1 vs. uniprot
Match: A0A433PH05_9FUNG (RRM domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PH05_9FUNG)

HSP 1 Score: 89.4 bits (220), Expect = 5.890e-20
Identity = 41/73 (56.16%), Postives = 56/73 (76.71%), Query Frame = 0
Query:    1 RLYLGSLHYELKESDIRAIFGNFGALKLVDMSHDASTGRHKGFCFIEYVDVRAADAALRAMNGFELAGRAIKV 73
            R+Y+GS+++EL E+ I+A+FG FG++K V MS D +TG+HKGFCFIE+    AA  AL AMNG +L GR +KV
Sbjct:  128 RIYVGSINFELNEAHIKAVFGQFGSIKSVSMSVDPATGKHKGFCFIEFETPEAAAMALDAMNGADLGGRQLKV 200          
BLAST of mRNA_L-elsbetiae_contig11531.1344.1 vs. uniprot
Match: L1JR44_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JR44_GUITC)

HSP 1 Score: 90.9 bits (224), Expect = 9.100e-20
Identity = 41/73 (56.16%), Postives = 59/73 (80.82%), Query Frame = 0
Query:    1 RLYLGSLHYELKESDIRAIFGNFGALKLVDMSHDASTGRHKGFCFIEYVDVRAADAALRAMNGFELAGRAIKV 73
            RLY+GSLH++LKE+D+RAIF  FG +K ++MS++ +TG+ KG+ FIEY++   ADA  +AM+GF +AGR IKV
Sbjct:   99 RLYVGSLHFDLKEADVRAIFQPFGPIKTIEMSYEPTTGKSKGYAFIEYMNDAQADACEKAMDGFMIAGRPIKV 171          
BLAST of mRNA_L-elsbetiae_contig11531.1344.1 vs. uniprot
Match: A0A7S4PQL3_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PQL3_GUITH)

HSP 1 Score: 90.9 bits (224), Expect = 1.010e-19
Identity = 41/73 (56.16%), Postives = 59/73 (80.82%), Query Frame = 0
Query:    1 RLYLGSLHYELKESDIRAIFGNFGALKLVDMSHDASTGRHKGFCFIEYVDVRAADAALRAMNGFELAGRAIKV 73
            RLY+GSLH++LKE+D+RAIF  FG +K ++MS++ +TG+ KG+ FIEY++   ADA  +AM+GF +AGR IKV
Sbjct:   87 RLYVGSLHFDLKEADVRAIFQPFGPIKTIEMSYEPTTGKSKGYAFIEYMNDAQADACEKAMDGFMIAGRPIKV 159          
BLAST of mRNA_L-elsbetiae_contig11531.1344.1 vs. uniprot
Match: F0WWX1_9STRA (Poly(U)bindingsplicing factor PUF60 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WWX1_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 1.700e-19
Identity = 41/73 (56.16%), Postives = 57/73 (78.08%), Query Frame = 0
Query:    1 RLYLGSLHYELKESDIRAIFGNFGALKLVDMSHDASTGRHKGFCFIEYVDVRAADAALRAMNGFELAGRAIKV 73
            RLY+G+L+YELKE DIR +F  FGA+  +D+S +  TGR KGFCF+E+ DV AA++A++ +NG  +A RAIKV
Sbjct:  137 RLYVGNLYYELKEDDIRNVFAPFGAIHSIDLSMEPGTGRSKGFCFLEFNDVLAAESAVQVLNGSTMANRAIKV 209          
BLAST of mRNA_L-elsbetiae_contig11531.1344.1 vs. uniprot
Match: A0A433DCP8_9FUNG (Uncharacterized protein n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DCP8_9FUNG)

HSP 1 Score: 90.1 bits (222), Expect = 2.020e-19
Identity = 41/73 (56.16%), Postives = 56/73 (76.71%), Query Frame = 0
Query:    1 RLYLGSLHYELKESDIRAIFGNFGALKLVDMSHDASTGRHKGFCFIEYVDVRAADAALRAMNGFELAGRAIKV 73
            R+Y+GS+++EL E+ I+A+FG FG++K V MS D +TG+HKGFCFIE+    AA  AL AMNG +L GR +KV
Sbjct:  131 RIYVGSINFELNEAHIKAVFGQFGSIKSVSMSVDPATGKHKGFCFIEFETPEAAAMALEAMNGADLGGRQLKV 203          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11531.1344.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWX1_ECTSI7.560e-3689.04RNA-binding protein SiahBP n=2 Tax=Ectocarpus TaxI... [more]
A0A836CC18_9STRA5.820e-2668.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2WU02_9STRA1.030e-2264.38Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2AH99_9STRA3.050e-2058.90Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A433QFW3_9FUNG3.350e-2056.16Uncharacterized protein n=1 Tax=Jimgerdemannia fla... [more]
A0A433PH05_9FUNG5.890e-2056.16RRM domain-containing protein n=1 Tax=Endogone sp.... [more]
L1JR44_GUITC9.100e-2056.16Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S4PQL3_GUITH1.010e-1956.16Hypothetical protein n=2 Tax=Guillardia theta TaxI... [more]
F0WWX1_9STRA1.700e-1956.16Poly(U)bindingsplicing factor PUF60 putative n=1 T... [more]
A0A433DCP8_9FUNG2.020e-1956.16Uncharacterized protein n=2 Tax=Jimgerdemannia fla... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 1..73
e-value: 1.2E-17
score: 74.7
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 2..72
e-value: 2.4E-21
score: 75.3
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 1..73
score: 17.66
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..73
e-value: 2.2E-22
score: 81.4
NoneNo IPR availablePANTHERPTHR47330FAMILY NOT NAMEDcoord: 1..73
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 1..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11531contigL-elsbetiae_contig11531:235..1194 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11531.1344.1mRNA_L-elsbetiae_contig11531.1344.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11531 235..1194 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11531.1344.1 ID=prot_L-elsbetiae_contig11531.1344.1|Name=mRNA_L-elsbetiae_contig11531.1344.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=73bp
RLYLGSLHYELKESDIRAIFGNFGALKLVDMSHDASTGRHKGFCFIEYVD
VRAADAALRAMNGFELAGRAIKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf