prot_L-elsbetiae_contig11528.1339.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11528.1339.1
Unique Nameprot_L-elsbetiae_contig11528.1339.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length47
Homology
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BLAST of mRNA_L-elsbetiae_contig11528.1339.1 vs. uniprot
Match: A0A6H5KJL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJL2_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 6.120e-11
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 0 
Query:    5 SQDGLREKVVAMGGSFDVNLTTSTTHLVAASSETEKYRVATRM 47
            +Q+ LREKV AMGGSFDVNLT STTHL+AAS +TEKYRVAT M
Sbjct:   23 TQEDLREKVNAMGGSFDVNLTMSTTHLLAASLDTEKYRVATGM 65
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BLAST of mRNA_L-elsbetiae_contig11528.1339.1 vs. uniprot
Match: D7G795_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G795_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 6.120e-11
Identity = 35/45 (77.78%), Postives = 38/45 (84.44%), Query Frame = 0 
Query:    3 AVSQDGLREKVVAMGGSFDVNLTTSTTHLVAASSETEKYRVATRM 47
            A  Q+ LREKV AMGGSFDVNLT STTHL+AAS +TEKYRVAT M
Sbjct:   18 AHQQEDLREKVNAMGGSFDVNLTMSTTHLLAASLDTEKYRVATGM 62
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11528.1339.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJL2_9PHAE6.120e-1179.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G795_ECTSI6.120e-1177.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190coord: 2..47
e-value: 1.8E-9
score: 39.8
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 5..47
IPR001357BRCT domainPFAMPF12738PTCB-BRCTcoord: 5..47
e-value: 6.3E-12
score: 45.3
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 1..47
score: 9.389

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11528contigL-elsbetiae_contig11528:5060..5200 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11528.1339.1mRNA_L-elsbetiae_contig11528.1339.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11528 5060..5200 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11528.1339.1 ID=prot_L-elsbetiae_contig11528.1339.1|Name=mRNA_L-elsbetiae_contig11528.1339.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=47bp
WTAVSQDGLREKVVAMGGSFDVNLTTSTTHLVAASSETEKYRVATRM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036420BRCT_dom_sf
IPR001357BRCT_dom