prot_L-elsbetiae_contig11504.1323.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11504.1323.1
Unique Nameprot_L-elsbetiae_contig11504.1323.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length272
Homology
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BLAST of mRNA_L-elsbetiae_contig11504.1323.1 vs. uniprot
Match: D8LSP7_ECTSI (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSP7_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 4.050e-78
Identity = 155/274 (56.57%), Postives = 187/274 (68.25%), Query Frame = 0 
Query:    1 SVTSLNLENGSA-PSPGLKAALA-AEREEGFAVVLFTEAGKASPVLRVLANEVKGRVSAVQARLPKRTASSXXXXXXXXXAEKMLKGLLEGVIDVQGTVDSVPALVLVDKLSGKGTVFDGAVDDAKAMLDFVRDGAGISAXXXXXXXXXXXXXXXXERSSSASSNEIGGLLRLDPGLLAALEEKGTEALVVAFVEGGDVDDSVIPGWAGATKSLQGEIRAAVFDCGAHPEECSKSKGSGSSKGAKAPHIRVYPHGSGVDGDKRGFPTVLRASEV 272
            SV S++LE  S+ PS  LK ALA  + EE FA +LFTEAGKASPVLRVLAN+V+G+VSAVQARL K   +           ++ L G+L+G +D+ GT+ SVP LVL++K SG+G+V+ GAVDDAKAML FVRDGAGIS+                      ++   GG+L LDP LL+ LEEKGTEALV AFVEGGDVD   IPGWA ATK LQGEIRA V DC AHP +C      GS+K  K P ++VYPHG GVDGDKRGFP+VL A+ V
Sbjct:  168 SVVSVDLEKSSSGPSTSLKEALAEGDGEEAFAAILFTEAGKASPVLRVLANQVRGKVSAVQARLAKGPTTPDDEDDEDVAQDEALAGMLKGTVDIPGTIPSVPFLVLLNKESGEGSVYGGAVDDAKAMLAFVRDGAGISSATEAGGAGASTSGSDGGGDRKGTT---GGVLELDPELLSVLEEKGTEALVAAFVEGGDVDS--IPGWAEATKGLQGEIRAGVLDCTAHPAQCE-----GSAK-QKMPFLKVYPHGKGVDGDKRGFPSVLPATGV 430
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11504.1323.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSP7_ECTSI4.050e-7856.57Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11504contigL-elsbetiae_contig11504:978..5475 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11504.1323.1mRNA_L-elsbetiae_contig11504.1323.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11504 978..5475 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11504.1323.1 ID=prot_L-elsbetiae_contig11504.1323.1|Name=mRNA_L-elsbetiae_contig11504.1323.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=272bp
SVTSLNLENGSAPSPGLKAALAAEREEGFAVVLFTEAGKASPVLRVLANE
VKGRVSAVQARLPKRTASSSSSSSSSQAAEKMLKGLLEGVIDVQGTVDSV
PALVLVDKLSGKGTVFDGAVDDAKAMLDFVRDGAGISASASASAFNTDTE
SGGGERSSSASSNEIGGLLRLDPGLLAALEEKGTEALVVAFVEGGDVDDS
VIPGWAGATKSLQGEIRAAVFDCGAHPEECSKSKGSGSSKGAKAPHIRVY
PHGSGVDGDKRGFPTVLRASEV
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