prot_L-elsbetiae_contig11483.1303.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig11483.1303.1
Unique Name	prot_L-elsbetiae_contig11483.1303.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	158

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig11483.1303.1 vs. uniprot
Match: D8LQ80_ECTSI (Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ80_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 2.880e-37
Identity = 67/76 (88.16%), Postives = 73/76 (96.05%), Query Frame = 0

Query:    2 ASKPTYNVMVFEAIKTLKERSGSSIQAIKKSITATYPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKPA 77
            ++KPTYN MVF+AIKTLKER+GSSIQAIKKSITATYP+LNFTPHQMRSALKKGVESGKFIK+K SYKLS EAKKPA
Sbjct:    3 STKPTYNAMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPA 78

[Close]

BLAST of mRNA_L-elsbetiae_contig11483.1303.1 vs. uniprot
Match: A0A6H5KCU1_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU1_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 7.620e-37
Identity = 68/75 (90.67%), Postives = 73/75 (97.33%), Query Frame = 0

Query:    3 SKPTYNVMVFEAIKTLKERSGSSIQAIKKSITATYPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKPA 77
            +KPTYNVMVF+AIKTLKER+GSSIQAIKKSITATYP+LNFTPHQMR ALKKGVESGKFIK+K SYKLSPEAKKPA
Sbjct:   97 AKPTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRGALKKGVESGKFIKMKASYKLSPEAKKPA 171

[Close]

BLAST of mRNA_L-elsbetiae_contig11483.1303.1 vs. uniprot
Match: D7G4I5_ECTSI (H15 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I5_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 2.860e-34
Identity = 63/75 (84.00%), Postives = 68/75 (90.67%), Query Frame = 0

Query:    3 SKPTYNVMVFEAIKTLKERSGSSIQAIKKSITATYPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKPA 77
            +KPTY+VMVF+AIK LKER GSS+ A+KK I ATYPSLNFTPHQMRSALKKG ESGKFIKVK SYKLSPEAKKPA
Sbjct:    5 AKPTYSVMVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 79

[Close]

BLAST of mRNA_L-elsbetiae_contig11483.1303.1 vs. uniprot
Match: A0A6H5KST0_9PHAE (H15 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KST0_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 4.710e-32
Identity = 61/68 (89.71%), Postives = 66/68 (97.06%), Query Frame = 0

Query:   10 MVFEAIKTLKERSGSSIQAIKKSITATYPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKPA 77
            MVF+AIKTLKER+GSSIQAIKKSITATYP+LNFTPHQMRSALKKGVESGKF+K+K SYKLS EAKKPA
Sbjct:    1 MVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPA 68

[Close]

BLAST of mRNA_L-elsbetiae_contig11483.1303.1 vs. uniprot
Match: D8LQ75_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ75_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 9.460e-31
Identity = 60/67 (89.55%), Postives = 65/67 (97.01%), Query Frame = 0

Query:   10 MVFEAIKTLKERSGSSIQAIKKSITATYPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKP 76
            MVF+AIK+LKER+GSSIQAIKKSITATYP+LNFTPHQMRSALKKGVE+GKFIKVK SYKLS EAKKP
Sbjct:    1 MVFDAIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKP 67

[Close]

BLAST of mRNA_L-elsbetiae_contig11483.1303.1 vs. uniprot
Match: A0A6H5JHR9_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR9_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 3.760e-30
Identity = 58/68 (85.29%), Postives = 61/68 (89.71%), Query Frame = 0

Query:   10 MVFEAIKTLKERSGSSIQAIKKSITATYPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKPA 77
            MVF+AIK LKER GSS+ A+KK I ATYPSLNFTPHQMRSALKKG ESGKFIKVK SYKLSPEAKKPA
Sbjct:    1 MVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKPA 68

[Close]

BLAST of mRNA_L-elsbetiae_contig11483.1303.1 vs. uniprot
Match: A0A6H5K9S6_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9S6_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 4.940e-25
Identity = 50/62 (80.65%), Postives = 59/62 (95.16%), Query Frame = 0

Query:   10 MVFEAIKTLKERSGSSIQAIKKSITATYPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSP 71
            MVF+AIKTLKER+GSSIQA+KKSITATYP+L+FTPHQMRSALKKGVE+GKFIKV+ +  L+P
Sbjct:    1 MVFDAIKTLKERNGSSIQAMKKSITATYPALHFTPHQMRSALKKGVETGKFIKVRHALPLAP 62

[Close]

BLAST of mRNA_L-elsbetiae_contig11483.1303.1 vs. uniprot
Match: D8LMF1_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF1_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 1.770e-24
Identity = 51/72 (70.83%), Postives = 58/72 (80.56%), Query Frame = 0

Query:    5 PTYNVMVFEAIKTLKERSGSSIQAIKKSITATYPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKP 76
            PTY+ M   AI  LKER+GSS+ AIKK I ATYP+LNF PHQ+R ALKKG E+G FIKVK SYK+SPEAKKP
Sbjct:    2 PTYSEMAKVAILALKERNGSSVPAIKKHIQATYPTLNFLPHQLRGALKKGTETGTFIKVKASYKVSPEAKKP 73

[Close]

BLAST of mRNA_L-elsbetiae_contig11483.1303.1 vs. uniprot
Match: D8LJB8_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB8_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 2.540e-23
Identity = 53/73 (72.60%), Postives = 60/73 (82.19%), Query Frame = 0

Query:    5 PTYNVMVFEAIKTLKERSGSSIQAIKKSITATYPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLSPEAKKPA 77
            PTY+ M  EA+K LKER+GSS+ AIKK ITA+YPSL FT H MRSALKKGVESGKFIKVK SYKLS   ++PA
Sbjct:    2 PTYDEMTIEAVKALKERNGSSLFAIKKHITASYPSLTFTAHFMRSALKKGVESGKFIKVKNSYKLSAYRQEPA 74

[Close]

BLAST of mRNA_L-elsbetiae_contig11483.1303.1 vs. uniprot
Match: A0A6H5JIM8_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM8_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 1.920e-21
Identity = 50/66 (75.76%), Postives = 56/66 (84.85%), Query Frame = 0

Query:    5 PTYNVMVFEAIKTLKERSGSSIQAIKKSITATYPSLNFTPHQMRSALKKGVESGKFIKVKGSYKLS 70
            PTY+ M  EA+K LKER+GSS+ AIKK ITA+YPSL FT H +RSALKKGVESGKFIKVK SYKLS
Sbjct:    2 PTYDEMTVEAVKALKERNGSSLFAIKKHITASYPSLTFTGHFLRSALKKGVESGKFIKVKNSYKLS 67

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig11483.1303.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig11483.1303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LQ80_ECTSI	2.880e-37	88.16	Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=28...	[more]
A0A6H5KCU1_9PHAE	7.620e-37	90.67	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D7G4I5_ECTSI	2.860e-34	84.00	H15 domain-containing protein n=2 Tax=Ectocarpus T...	[more]
A0A6H5KST0_9PHAE	4.710e-32	89.71	H15 domain-containing protein n=6 Tax=Ectocarpus T...	[more]
D8LQ75_ECTSI	9.460e-31	89.55	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5JHR9_9PHAE	3.760e-30	85.29	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5K9S6_9PHAE	4.940e-25	80.65	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LMF1_ECTSI	1.770e-24	70.83	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LJB8_ECTSI	2.540e-23	72.60	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5JIM8_9PHAE	1.920e-21	75.76	H15 domain-containing protein n=1 Tax=Ectocarpus s...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005819	Histone H5	PRINTS	PR00624	HISTONEH5	coord: 17..34 score: 50.62 coord: 90..104 score: 31.85 coord: 142..157 score: 32.22 coord: 120..137 score: 38.27
IPR005818	Linker histone H1/H5, domain H15	SMART	SM00526	h15plus2	coord: 1..66 e-value: 1.5E-23 score: 94.3
IPR005818	Linker histone H1/H5, domain H15	PFAM	PF00538	Linker_histone	coord: 4..69 e-value: 4.0E-21 score: 75.2
IPR005818	Linker histone H1/H5, domain H15	PROSITE	PS51504	H15	coord: 3..71 score: 31.118
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 1..83 e-value: 1.3E-20 score: 75.4
None	No IPR available	PANTHER	PTHR11467:SF42	HISTONE H1OO	coord: 4..155
None	No IPR available	PANTHER	PTHR11467	HISTONE H1	coord: 4..155
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 3..83

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig11483	contig	L-elsbetiae_contig11483:3967..5779 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig11483.1303.1	mRNA_L-elsbetiae_contig11483.1303.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig11483 3967..5779 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig11483.1303.1 ID=prot_L-elsbetiae_contig11483.1303.1|Name=mRNA_L-elsbetiae_contig11483.1303.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=158bp
MASKPTYNVMVFEAIKTLKERSGSSIQAIKKSITATYPSLNFTPHQMRSA
LKKGVESGKFIKVKGSYKLSPEAKKPAPKPKKKVVKKVVKKVVKKKVVRK
VAKKPAAKKPTAKKASTPKKAAPKKTAAKKTVTKKPAKKASTPKKKAAPK
KKTAKKA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005819	Histone_H5
IPR005818	Histone_H1/H5_H15
IPR036388	WH-like_DNA-bd_sf
IPR036390	WH_DNA-bd_sf