prot_L-elsbetiae_contig11481.1302.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11481.1302.1
Unique Nameprot_L-elsbetiae_contig11481.1302.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length140
Homology
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BLAST of mRNA_L-elsbetiae_contig11481.1302.1 vs. uniprot
Match: D7FY04_ECTSI (Putative regulatory protein cII n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY04_ECTSI)

HSP 1 Score: 240 bits (613), Expect = 6.900e-75
Identity = 113/139 (81.29%), Postives = 123/139 (88.49%), Query Frame = 0 
Query:    1 MKNNLKDALAPVLQFAGGGGPLGQWGPADVSKIGLPDGCGDGALFLLPGHEGIVDYDQKVTVAYGTNLMVEAAAPGAWNKLMALTARKCGADIVLVDCSPHRGKLNMHIILTSDYLFVPCAPDTYSHNAIKALPAIMKD 139
            MKNN+KDAL PVL+ AG   P+ QWGPADV+KI LP+GC  G LFLLPGHEG+VDY+QKVTVAYGTNL+VEA APGAWNKLMALTAR CGADIVLVDC+PHRGKLNMHIILTSDYLF+PC PDTY HNAIKALP IM D
Sbjct:  114 MKNNIKDALRPVLEPAGSDSPMVQWGPADVTKIPLPEGC-QGGLFLLPGHEGLVDYEQKVTVAYGTNLLVEAIAPGAWNKLMALTARSCGADIVLVDCNPHRGKLNMHIILTSDYLFLPCTPDTYCHNAIKALPFIMAD 251
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BLAST of mRNA_L-elsbetiae_contig11481.1302.1 vs. uniprot
Match: D7FY09_ECTSI (Putative regulatory protein cII n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY09_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 1.040e-71
Identity = 112/139 (80.58%), Postives = 123/139 (88.49%), Query Frame = 0 
Query:    1 MKNNLKDALAPVLQFAGGGGPLGQWGPADVSKIGLPDGCGDGALFLLPGHEGIVDYDQKVTVAYGTNLMVEAAAPGAWNKLMALTARKCGADIVLVDCSPHRGKLNMHIILTSDYLFVPCAPDTYSHNAIKALPAIMKD 139
            MKNN+KDAL PVL+ AG   P+ QWGPADV+KI LP+GC  G LFLLPGHEG+VDY+QKVTVAYGTNL+VEA APGAWNKLMALTAR CGADIVLVDC+PHRGKLNMHIILTSDYLF+PC P+TY HNAIKALP IM D
Sbjct:  435 MKNNIKDALRPVLEPAGSDSPMVQWGPADVTKIPLPEGC-QGGLFLLPGHEGLVDYEQKVTVAYGTNLLVEAIAPGAWNKLMALTARSCGADIVLVDCNPHRGKLNMHIILTSDYLFLPCTPETYCHNAIKALPFIMAD 572
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BLAST of mRNA_L-elsbetiae_contig11481.1302.1 vs. uniprot
Match: UPI00156D48D6 (AAA family ATPase n=1 Tax=Dorea formicigenerans TaxID=39486 RepID=UPI00156D48D6)

HSP 1 Score: 79.7 bits (195), Expect = 6.420e-15
Identity = 53/138 (38.41%), Postives = 71/138 (51.45%), Query Frame = 0 
Query:    3 NNLKDALAPVLQFAGGGGPLGQWGPADVSKIGLPDGCGDGALFLLPGHEGIVDYDQKVTVAY----GTNLMVEAAAPGAWNKLMALTARKCGADIVLVDCSPHRGKLNMHIILTSDYLFVPCAPDTYSHNAIKALPAI 136
            +N+K AL PVL     GG L     A   +    +      LFLLPGH    ++D    +A       NLM     PGA+ K++ LTA++   DIVLVD SP     N +I++ SDY  VPCAPD + + AI +L  I
Sbjct:   66 SNIKSALDPVL-----GGTLEPLTAAKCVEFENNEN-----LFLLPGHVQFAEFDTTYNIAETMTGSLNLMKNV--PGAFRKMLELTAKEYKIDIVLVDMSPSISATNSNILMQSDYFIVPCAPDYFCYMAINSLLTI 191
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11481.1302.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FY04_ECTSI6.900e-7581.29Putative regulatory protein cII n=2 Tax=Ectocarpus... [more]
D7FY09_ECTSI1.040e-7180.58Putative regulatory protein cII n=1 Tax=Ectocarpus... [more]
UPI00156D48D66.420e-1538.41AAA family ATPase n=1 Tax=Dorea formicigenerans Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025669AAA domainPFAMPF13614AAA_31coord: 88..134
e-value: 1.7E-7
score: 31.3
NoneNo IPR availableGENE3D3.40.50.300coord: 1..139
e-value: 6.2E-16
score: 60.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 42..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11481contigL-elsbetiae_contig11481:2845..3264 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11481.1302.1mRNA_L-elsbetiae_contig11481.1302.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11481 2824..3787 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11481.1302.1 ID=prot_L-elsbetiae_contig11481.1302.1|Name=mRNA_L-elsbetiae_contig11481.1302.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=140bp
MKNNLKDALAPVLQFAGGGGPLGQWGPADVSKIGLPDGCGDGALFLLPGH
EGIVDYDQKVTVAYGTNLMVEAAAPGAWNKLMALTARKCGADIVLVDCSP
HRGKLNMHIILTSDYLFVPCAPDTYSHNAIKALPAIMKD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025669AAA_dom
IPR027417P-loop_NTPase