prot_L-elsbetiae_contig11465.1287.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11465.1287.1
Unique Nameprot_L-elsbetiae_contig11465.1287.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length300
Homology
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BLAST of mRNA_L-elsbetiae_contig11465.1287.1 vs. uniprot
Match: D7G6K8_ECTSI (DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6K8_ECTSI)

HSP 1 Score: 259 bits (661), Expect = 7.970e-75
Identity = 175/306 (57.19%), Postives = 199/306 (65.03%), Query Frame = 0 
Query:   15 SSWGSLGRGAGXXXXXXQRRQTPFPRSMN------SDKAIKLPLHVVGLQFRENNST-AWPSP-----------PAPPGQGGSPHHSPAEPHA-TPPGISGNTALEVEREPCNLHDRNAIKVLLPAPARQQPPLPPSPGGRRRCRSSSAPSRFLGYIPGRIAVLMAPLMDASP-PAARVTLKSVEHEXXXXXXXXXAGPPGPRNTLPALLEVKPLDGAGREPFSGVVAKLREAAKKEEKXXXXXXSESKAHKERLRSKQKTLLLDFGRSAGA--SSKGGAESSAASGSNKGGALLEGMAWEVLWQV 298
            SSWGSLGRGAG        RQ  F  S N      S K I LPLHVVGLQFR+N +  AW SP           P+P G+       PA P A T   I  NT LE+EREP N HDRNAIKVLLPA   Q PP P  PG +      SAPSRFLGYIPGRIAVL+AP++DASP P ARVTLK+VE E         A   G RNTLPALLEV PLDGAGREPFS ++ KLR+AA+KE+K      +E+KA+K+RLRSKQKTLLLDFGRS+GA  S  GG+   + SGS +GG +LE M WEVLWQV
Sbjct:   76 SSWGSLGRGAGRGG-----RQQRFLLSDNGRPPRGSTKIIALPLHVVGLQFRQNQTDDAWSSPRKSSATTAASSPSPHGE------QPAAPAACTNDDIGSNTVLELEREPYNSHDRNAIKVLLPAKP-QTPPPPLLPGSQ-----PSAPSRFLGYIPGRIAVLLAPVVDASPDPVARVTLKTVEEEGGE------AAGGGTRNTLPALLEVHPLDGAGREPFSSLMEKLRDAARKEDKRQHKRRNEAKANKDRLRSKQKTLLLDFGRSSGATTSKSGGSXXXSTSGSARGGTMLESMPWEVLWQV 358
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11465.1287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G6K8_ECTSI7.970e-7557.19DNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.2330coord: 93..186
e-value: 8.9E-6
score: 27.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11465contigL-elsbetiae_contig11465:3925..6052 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11465.1287.1mRNA_L-elsbetiae_contig11465.1287.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11465 3925..6052 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11465.1287.1 ID=prot_L-elsbetiae_contig11465.1287.1|Name=mRNA_L-elsbetiae_contig11465.1287.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=300bp
TAELATPSSTQPPASSWGSLGRGAGGGGGGGQRRQTPFPRSMNSDKAIKL
PLHVVGLQFRENNSTAWPSPPAPPGQGGSPHHSPAEPHATPPGISGNTAL
EVEREPCNLHDRNAIKVLLPAPARQQPPLPPSPGGRRRCRSSSAPSRFLG
YIPGRIAVLMAPLMDASPPAARVTLKSVEHEEEEEKEGGGAGPPGPRNTL
PALLEVKPLDGAGREPFSGVVAKLREAAKKEEKRQQKRRSESKAHKERLR
SKQKTLLLDFGRSAGASSKGGAESSAASGSNKGGALLEGMAWEVLWQVN*
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