prot_L-elsbetiae_contig1141.1241.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1141.1241.1
Unique Nameprot_L-elsbetiae_contig1141.1241.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length99
Homology
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BLAST of mRNA_L-elsbetiae_contig1141.1241.1 vs. uniprot
Match: A0A6H5JIV3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIV3_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 5.680e-7
Identity = 45/104 (43.27%), Postives = 60/104 (57.69%), Query Frame = 0 
Query:    1 MKIIVALLLAFVAPAE--AFVPSTSCR----GVIASSRTRAAPSTLLRAKKKAKNKTRGTEKTGTVFLPTPVP--QGKDAFSAAPTFEEFLKFKQAERGETELK 96
            MK++++LL+AFVA +   AF+P+TS R     + AS   R+  ST L AKK+   K +     G V  P      Q   ++SA PTFEEFLKFKQAER   + K
Sbjct:    2 MKLVLSLLVAFVAASSTVAFLPATSLRYATTAIAASRLRRSTTSTSLSAKKQKSEKAQ----LGDVHEPEDDSDRQQSGSYSAPPTFEEFLKFKQAERANEDQK 101
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1141.1241.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JIV3_9PHAE5.680e-743.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..98
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.919

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1141contigL-elsbetiae_contig1141:25587..26277 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1141.1241.1mRNA_L-elsbetiae_contig1141.1241.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1141 25569..28286 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1141.1241.1 ID=prot_L-elsbetiae_contig1141.1241.1|Name=mRNA_L-elsbetiae_contig1141.1241.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=99bp
MKIIVALLLAFVAPAEAFVPSTSCRGVIASSRTRAAPSTLLRAKKKAKNK
TRGTEKTGTVFLPTPVPQGKDAFSAAPTFEEFLKFKQAERGETELKFP*
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