prot_L-elsbetiae_contig1141.1236.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1141.1236.1
Unique Nameprot_L-elsbetiae_contig1141.1236.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length78
Homology
BLAST of mRNA_L-elsbetiae_contig1141.1236.1 vs. uniprot
Match: A0A7S3Y650_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y650_HETAK)

HSP 1 Score: 102 bits (255), Expect = 8.930e-24
Identity = 49/76 (64.47%), Postives = 57/76 (75.00%), Query Frame = 0
Query:    2 NEVLQGSPDFKVQNGDRKCTDVLFLLMLFAAWAAMTLLGLIVTGVIPSEGLEPGNPKRLINGIDYEGRICGVGSAV 77
            N+ L+G  DF      RKCTD+LFLL+L A W AMT LG +V GVIP++ LEPGNP+RLINGIDY G ICGV SAV
Sbjct:   15 NKKLEGGADFPGPCEKRKCTDILFLLLLIACWVAMTFLGFVVCGVIPNDNLEPGNPQRLINGIDYNGHICGVDSAV 90          
BLAST of mRNA_L-elsbetiae_contig1141.1236.1 vs. uniprot
Match: A0A7S3Y6D2_HETAK (Choline transporter-like protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6D2_HETAK)

HSP 1 Score: 101 bits (252), Expect = 2.300e-23
Identity = 49/78 (62.82%), Postives = 58/78 (74.36%), Query Frame = 0
Query:    1 DNEVLQGSPDFKVQNGDRKCTDVLFLLMLFAAWAAMTLLGLIVTGVIPSEGLEPGNPKRLINGIDYEGRICGVGSAVK 78
            DN+ L+ S DF      RKCTD+LFLL++ A W AMT LG +VTG IPS+ L+ GNP+RLINGIDYEG ICGV S VK
Sbjct:   66 DNKKLEHSADFAGPCEKRKCTDILFLLLIIACWVAMTFLGFVVTGAIPSDTLDAGNPERLINGIDYEGNICGVDSGVK 143          
BLAST of mRNA_L-elsbetiae_contig1141.1236.1 vs. uniprot
Match: D7FSF7_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSF7_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 2.140e-20
Identity = 42/51 (82.35%), Postives = 49/51 (96.08%), Query Frame = 0
Query:   28 MLFAAWAAMTLLGLIVTGVIPSEGLEPGNPKRLINGIDYEGRICGVGSAVK 78
            MLFAAWAAMT+LG IVTG+IP++GLEPGNPKRL+NGIDYEGRICGVG+ V+
Sbjct:    1 MLFAAWAAMTMLGFIVTGLIPNDGLEPGNPKRLLNGIDYEGRICGVGTTVQ 51          
BLAST of mRNA_L-elsbetiae_contig1141.1236.1 vs. uniprot
Match: A0A835Z9G9_9STRA (Choline transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G9_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 2.150e-20
Identity = 47/76 (61.84%), Postives = 56/76 (73.68%), Query Frame = 0
Query:    2 NEVLQGSPDFKVQNGDRKCTDVLFLLMLFAAWAAMTLLGLIVTGVIPSEGLEPGNPKRLINGIDYEGRICGVGSAV 77
            N  L+GSP FKV    R+CTD+LF L+L A+WAAMT LGL+V G+I S   E GNPKRL+NGID +G ICGV  AV
Sbjct:   16 NAKLEGSPAFKVGE-HRRCTDMLFSLLLIASWAAMTFLGLVVVGIIDSPEFEAGNPKRLVNGIDNQGHICGVDKAV 90          
BLAST of mRNA_L-elsbetiae_contig1141.1236.1 vs. uniprot
Match: A0A7S2Y2B5_9STRA (Choline transporter-like protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2B5_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 8.030e-18
Identity = 39/62 (62.90%), Postives = 49/62 (79.03%), Query Frame = 0
Query:   17 DRKCTDVLFLLMLFAAWAAMTLLGLIVTGVIPSEGLEPGNPKRLINGIDYEGRICGVGSAVK 78
            +RKCTDVL +L+L A W A T+LG IV GVI +E LE GNP RL+NG+DY+GR+CG+ S VK
Sbjct:    5 NRKCTDVLCMLLLIAVWFATTILGFIVCGVIENENLEAGNPWRLVNGVDYDGRVCGIDSGVK 66          
BLAST of mRNA_L-elsbetiae_contig1141.1236.1 vs. uniprot
Match: A0A7S3H7K4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H7K4_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 2.810e-17
Identity = 38/60 (63.33%), Postives = 47/60 (78.33%), Query Frame = 0
Query:   18 RKCTDVLFLLMLFAAWAAMTLLGLIVTGVIPSEGLEPGNPKRLINGIDYEGRICGVGSAV 77
            R CTD+L LL+L A W  MT+LGLIVTG+I ++ L  G+P+RLIN IDY GRICGVG+ V
Sbjct:    6 RCCTDLLMLLLLIAVWITMTVLGLIVTGLIENDNLTAGDPRRLINPIDYNGRICGVGTGV 65          
BLAST of mRNA_L-elsbetiae_contig1141.1236.1 vs. uniprot
Match: B8C1T3_THAPS (Choline transporter-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C1T3_THAPS)

HSP 1 Score: 74.3 bits (181), Expect = 9.210e-14
Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 0
Query:   18 RKCTDVLFLLMLFAAWAAMTLLGLIVTGVIPSEGLEPGNPKRLINGIDYEGRICGV 73
            R CTDVLFLL+L  AW AMT +GL  TG+I SE ++ G+P+RLING+DY   ICGV
Sbjct:    5 RTCTDVLFLLLLVCAWIAMTGVGLAATGLIKSEVIKKGDPRRLINGLDYHANICGV 60          
BLAST of mRNA_L-elsbetiae_contig1141.1236.1 vs. uniprot
Match: D8LIJ7_ECTSI (Choline transporter-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIJ7_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 3.230e-13
Identity = 37/71 (52.11%), Postives = 46/71 (64.79%), Query Frame = 0
Query:    8 SPDFKVQNGDRKCTDVLFLLMLFAAWAAMTLLGLIVTGVIPSEGLEPGNPKRLINGIDYEGRICGVGSAVK 78
            +PD      DR+CTDVLF+L+L  AW AMT LG+        +G+  GNP  L+NGIDY+GRICGV   VK
Sbjct:   20 APDDIEGGADRRCTDVLFMLVLILAWLAMTYLGV--------DGISNGNPDLLLNGIDYDGRICGVDDGVK 82          
BLAST of mRNA_L-elsbetiae_contig1141.1236.1 vs. uniprot
Match: A0A6H5L007_9PHAE (Choline transporter-like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L007_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 3.240e-13
Identity = 37/71 (52.11%), Postives = 46/71 (64.79%), Query Frame = 0
Query:    8 SPDFKVQNGDRKCTDVLFLLMLFAAWAAMTLLGLIVTGVIPSEGLEPGNPKRLINGIDYEGRICGVGSAVK 78
            +PD      DR+CTDVLF+L+L  AW AMT LG+        +G+  GNP  L+NGIDY+GRICGV   VK
Sbjct:    4 APDDIEGGADRRCTDVLFMLVLILAWLAMTYLGV--------DGISNGNPDLLLNGIDYDGRICGVDDGVK 66          
BLAST of mRNA_L-elsbetiae_contig1141.1236.1 vs. uniprot
Match: A0A835Z6J7_9STRA (Choline transporter-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6J7_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 9.980e-12
Identity = 36/78 (46.15%), Postives = 51/78 (65.38%), Query Frame = 0
Query:    3 EVLQGSPDFKVQNGD--RKCTDVLFLLMLFAAWAAMTLLGLIVTGVIPSEGLEPGNPKRLINGIDYEGRICGVGSAVK 78
            + LQ  P+F   +G   RKCTD LF+L+L   W AMT++G+        + ++ GNP RL+NGIDY+GRICGV + V+
Sbjct:    7 QKLQAPPNF---DGPVKRKCTDTLFMLVLVCCWIAMTVIGI--------KAVQTGNPDRLVNGIDYQGRICGVDAGVE 73          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1141.1236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y650_HETAK8.930e-2464.47Choline transporter-like protein n=1 Tax=Heterosig... [more]
A0A7S3Y6D2_HETAK2.300e-2362.82Choline transporter-like protein n=1 Tax=Heterosig... [more]
D7FSF7_ECTSI2.140e-2082.35Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A835Z9G9_9STRA2.150e-2061.84Choline transporter-like protein n=1 Tax=Tribonema... [more]
A0A7S2Y2B5_9STRA8.030e-1862.90Choline transporter-like protein n=1 Tax=Fibrocaps... [more]
A0A7S3H7K4_9STRA2.810e-1763.33Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
B8C1T3_THAPS9.210e-1462.50Choline transporter-like protein (Fragment) n=1 Ta... [more]
D8LIJ7_ECTSI3.230e-1352.11Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A6H5L007_9PHAE3.240e-1352.11Choline transporter-like protein n=1 Tax=Ectocarpu... [more]
A0A835Z6J7_9STRA9.980e-1246.15Choline transporter-like protein n=1 Tax=Tribonema... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 48..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 23..47
NoneNo IPR availableTMHMMTMhelixcoord: 25..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1141contigL-elsbetiae_contig1141:937..2324 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1141.1236.1mRNA_L-elsbetiae_contig1141.1236.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1141 937..2325 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1141.1236.1 ID=prot_L-elsbetiae_contig1141.1236.1|Name=mRNA_L-elsbetiae_contig1141.1236.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=78bp
DNEVLQGSPDFKVQNGDRKCTDVLFLLMLFAAWAAMTLLGLIVTGVIPSE
GLEPGNPKRLINGIDYEGRICGVGSAVK
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