prot_L-elsbetiae_contig11408.1233.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11408.1233.1
Unique Nameprot_L-elsbetiae_contig11408.1233.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length194
Homology
BLAST of mRNA_L-elsbetiae_contig11408.1233.1 vs. uniprot
Match: D7FND7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FND7_ECTSI)

HSP 1 Score: 229 bits (585), Expect = 3.870e-68
Identity = 113/130 (86.92%), Postives = 122/130 (93.85%), Query Frame = 0
Query:    1 MPSDILSVRVTTEVLAEKAGEEPTLAVHVIVDKSVPVLGWVLMVSALFGLAAMAPLGNLLSKMSPDTLPAVYPVWRYSCSAVMYSPWFLLMVAGSKSARAELRDLSVVMPIVFAGAGLAGWGLCFYSALN 130
            MPSDI SVRVTTEV+AEK GEEPTLAVHVIVD+SVPVLGWVLMVSALFGLAAMAPLG+LLSKMSPD LPA+YPVWRY CS ++YSPWFLLMVAGSKSARAELRD S+V+P+V AG GLAGWGLCFYSALN
Sbjct:  544 MPSDIRSVRVTTEVVAEKEGEEPTLAVHVIVDRSVPVLGWVLMVSALFGLAAMAPLGDLLSKMSPDALPAIYPVWRYCCSTIIYSPWFLLMVAGSKSARAELRDWSLVLPVVLAGTGLAGWGLCFYSALN 673          
BLAST of mRNA_L-elsbetiae_contig11408.1233.1 vs. uniprot
Match: A0A6H5JIJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIJ2_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 6.300e-46
Identity = 89/122 (72.95%), Postives = 98/122 (80.33%), Query Frame = 0
Query:    1 MPSDILSVRVTTEVLAEKAGEEPTLAVHVIVDKSVPVLGWVLMVSALFGLAAMAPLGNLLSKMSPDTLPAVYPVWRYSCSAVMYSPWFLLMVAGSKSARAELRDLSVVMPIVFAGAGLAGWG 122
            MPSDI SVRVTTEV+ EK GEEPTLAVHVIVD+SVPVLGWVLMVSALFGLAAMAPLG+LLSKMSPD LPA+YPVWRY CS ++YSPWFLLMVAGS       R  +   P  ++GA    WG
Sbjct:  316 MPSDIQSVRVTTEVVTEKEGEEPTLAVHVIVDRSVPVLGWVLMVSALFGLAAMAPLGDLLSKMSPDALPAIYPVWRYCCSTIIYSPWFLLMVAGSNP-YTSWRSWACFSP--WSGASCRPWG 434          
BLAST of mRNA_L-elsbetiae_contig11408.1233.1 vs. uniprot
Match: A0A061S7N4_9CHLO (Drug metabolite transporter superfamily n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S7N4_9CHLO)

HSP 1 Score: 67.0 bits (162), Expect = 1.420e-9
Identity = 48/179 (26.82%), Postives = 91/179 (50.84%), Query Frame = 0
Query:    1 MPSDILSVRVTTEVLAEKAGEEPTLAVHVIVDKSVPVLGWVLMVSALFGLAAMAPLGNLLSKMSPDTLPAVYPVWRYSCSAVMYSPWFLLMVAGSKSARAELRDLSVVMPIVFAGAGLAGWGLCFYSALNFISASMVALLASLTPMCLVVWRGVTGDAVHMLEIIGVLLAMVGGVVSTV 179
            +PSDI  V V  + + + AGE+ T  V + V ++ PVLG+ L+V A++G++ +     +LS   P     +   WR + + ++ +PW    +  +      LRD   V+ ++      + +   F  AL++ +     LL++   M ++VWR + G+ V + E  GV L + G  V+++
Sbjct:  289 LPSDISDVVVRAQPIEDAAGEKHT-GVQITVSRTAPVLGYFLLVLAVWGVSTLGAGFRMLSPADPY----MKATWRSTLALLVLTPWTAANLFSNYRCLYSLRDPMTVLELLATAFFSSQYISFFVVALSYTNLETAFLLSNCHSMLIIVWRLLRGNPVTLFEGAGVFLGLSGAAVASL 462          
BLAST of mRNA_L-elsbetiae_contig11408.1233.1 vs. uniprot
Match: A0A397DGL5_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DGL5_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.670e-5
Identity = 59/193 (30.57%), Postives = 86/193 (44.56%), Query Frame = 0
Query:    1 MPSDILSVRVTTEVLAEKAGEEPTLAVHVIVDKSVPVLGWVLMVSALFGLAAMAPLGNLLSKMSPDTLPAVYPVWRYSCSAVMYSPWFLLMVAGSKSARAELRDLS--------VVMPIVFAGAGLAGWGLCFYSALNFISASMVALLASLTPMCLVVWRGVTGDAVHMLEIIGVLLAMVGGVVSTVGEGGGD 185
            +PSDI  V V   V  E       LAVH    K+VP LG+ +++ AL  ++A       L  + P     +  VWR+  +   Y    +L V  S   R ++R  S        V+   V      A +   F  AL+  S S   +  +   + LVV + VTG  V  LE +G ++ +VGGVV+T    GGD
Sbjct:  210 LPSDIKDVSVEASVAVESNHVHLQLAVH----KTVPWLGFSILIFALISVSAQGAAMQALVGVPP----LLKVVWRFFGATCAY---VVLGVITSVLNRNQVRWSSLKLLLSRRVIWESVVCTVSYATFVGTFVWALDHTSVSHAYIFCNAHSLLLVVAKWVTGQPVAPLETVGAIMGIVGGVVTTADGSGGD 391          
BLAST of mRNA_L-elsbetiae_contig11408.1233.1 vs. uniprot
Match: A0A425D547_9STRA (LisH domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425D547_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 1.910e-5
Identity = 59/193 (30.57%), Postives = 85/193 (44.04%), Query Frame = 0
Query:    1 MPSDILSVRVTTEVLAEKAGEEPTLAVHVIVDKSVPVLGWVLMVSALFGLAAMAPLGNLLSKMSPDTLPAVYPVWRYSCSAVMYSPWFLLMVAGSKSARAELRDLS--------VVMPIVFAGAGLAGWGLCFYSALNFISASMVALLASLTPMCLVVWRGVTGDAVHMLEIIGVLLAMVGGVVSTVGEGGGD 185
            +PSDI  V V   V  E       LAVH    K+VP LG+ +++ AL  ++A       L  + P     +  VWR+  +   Y    +L V  S   R + R  S        V+   V      A +   F  AL+  S S   +  +   + LVV + VTG  V  LE +G ++ +VGGVV+T    GGD
Sbjct:  926 LPSDIKDVSVEASVAVESNHVHLQLAVH----KTVPWLGFSILIFALISVSAQGAAMQALVGVPP----LLKVVWRFFGATCAY---VVLGVVTSVLNRNQFRWSSLKLLLSRRVIWESVVCTVSYATFVGTFVWALDHTSVSHAYIFCNAHSLLLVVAKWVTGQPVAPLETVGAIMGIVGGVVTTADGSGGD 1107          
BLAST of mRNA_L-elsbetiae_contig11408.1233.1 vs. uniprot
Match: B8BQ86_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQ86_THAPS)

HSP 1 Score: 54.3 bits (129), Expect = 3.290e-5
Identity = 52/197 (26.40%), Postives = 94/197 (47.72%), Query Frame = 0
Query:    1 MPSDI--LSVRVTTEVLAEKAGEEPT----LAVHVIVDKSVPVLGWVLMVSALFGLAAMAPLGNLLSKMSPDTLPAVYPVWRYSCSAVMYSPWFLLMVAGSKSARAEL-----RDLSVVMPIVFAGAGLAGWGLCFYSALNFISASMVALLASLTPMCLVVWRGVTGDAVHMLEIIGVLLAMVGGVVSTV-GEGGGD 185
            +P+DI  + +RV+T +  +  G E      + + V+VD+ VP++G+V++VS   GL +++ +G           P +   WR+S +A++     LL ++     R E       +L V MP  FAGA        F  AL   S     +L+++  + ++  + + G  V   E +G L+   G ++  V G+  GD
Sbjct:  379 LPTDIRHIELRVSTAIPTDSTGLEDLRDEEVHLDVVVDRKVPLIGYVILVS---GLVSLSSVGAAFDLQQGGVTPEMKAFWRFSSTAIL-----LLFLSAKSLNREEFGKFTWNELWVWMP--FAGAMYGFMCTAFVIALEMTSLVNAFILSNMASLIIIGSKFLLGRPVLFYEGLGALIGFAGALICAVAGQSSGD 565          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11408.1233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FND7_ECTSI3.870e-6886.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JIJ2_9PHAE6.300e-4672.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A061S7N4_9CHLO1.420e-926.82Drug metabolite transporter superfamily n=1 Tax=Te... [more]
A0A397DGL5_9STRA1.670e-530.57Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
A0A425D547_9STRA1.910e-530.57LisH domain-containing protein n=1 Tax=Aphanomyces... [more]
B8BQ86_THAPS3.290e-526.40Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR22911:SF76coord: 20..184
NoneNo IPR availablePANTHERPTHR22911ACYL-MALONYL CONDENSING ENZYME-RELATEDcoord: 20..184
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 158..179
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..123
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 94..104
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..54
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 55..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 129..151
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 180..193
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 124..128
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 152..157
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..93
NoneNo IPR availableTMHMMTMhelixcoord: 134..151
NoneNo IPR availableTMHMMTMhelixcoord: 158..180
NoneNo IPR availableTMHMMTMhelixcoord: 35..57
NoneNo IPR availableTMHMMTMhelixcoord: 107..129
NoneNo IPR availableTMHMMTMhelixcoord: 72..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11408contigL-elsbetiae_contig11408:751..5813 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11408.1233.1mRNA_L-elsbetiae_contig11408.1233.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11408 751..5828 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11408.1233.1 ID=prot_L-elsbetiae_contig11408.1233.1|Name=mRNA_L-elsbetiae_contig11408.1233.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=194bp
MPSDILSVRVTTEVLAEKAGEEPTLAVHVIVDKSVPVLGWVLMVSALFGL
AAMAPLGNLLSKMSPDTLPAVYPVWRYSCSAVMYSPWFLLMVAGSKSARA
ELRDLSVVMPIVFAGAGLAGWGLCFYSALNFISASMVALLASLTPMCLVV
WRGVTGDAVHMLEIIGVLLAMVGGVVSTVGEGGGDEGADAGKV*
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