prot_L-elsbetiae_contig114.1222.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig114.1222.1
Unique Nameprot_L-elsbetiae_contig114.1222.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length209
Homology
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BLAST of mRNA_L-elsbetiae_contig114.1222.1 vs. uniprot
Match: D8LKS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS0_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 6.970e-62
Identity = 102/131 (77.86%), Postives = 111/131 (84.73%), Query Frame = 0 
Query:    1 QRYCTDWPEYHWAEVCKRMRLERVRSLDKVYVHGAHGTKCYFLLRGLARVLMPEDDPTNPGGVRYHPDMDLGPGDLFGDDVLEGSGVAKKRNGTVVAVTDCEFAVLDAPDYSDVRDRGLSQMTLDDKCHFL 131
            QR+CT+WPEYHW+EVCK MRLE VRSLDKVYVHGAHGTKCY LLRGLARVL PE+DP N G VRY PD DLGPGDLFGDDVL G     KR  +VVAVTDCEFAVLD  DY+ V+DRGLS+M+LDDKCHFL
Sbjct:  506 QRHCTEWPEYHWSEVCKHMRLEEVRSLDKVYVHGAHGTKCYVLLRGLARVLQPEEDP-NTGVVRYVPDADLGPGDLFGDDVLRG---VPKRPNSVVAVTDCEFAVLDESDYTTVKDRGLSKMSLDDKCHFL 632
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BLAST of mRNA_L-elsbetiae_contig114.1222.1 vs. uniprot
Match: D7G8M0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M0_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 6.920e-27
Identity = 60/74 (81.08%), Postives = 65/74 (87.84%), Query Frame = 0 
Query:  133 SVAMMRTSSTYHLYKIALLVKTDDAVKDSVILRCDEPSKALYFIVSGTVEVIQLKKKRVRHRIAANTGTGNTAG 206
            SVAMMR SSTYHLYKIALLVKTDDAVKDS+ILR  EPSKALYF+VSGTVEVIQLK+KRVR++   NTG G  AG
Sbjct:    5 SVAMMRMSSTYHLYKIALLVKTDDAVKDSMILRAGEPSKALYFVVSGTVEVIQLKRKRVRNQAPLNTGAGKAAG 78
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BLAST of mRNA_L-elsbetiae_contig114.1222.1 vs. uniprot
Match: A0A833SFL8_PHYIN (Cyclic nucleotide-binding domain n=7 Tax=Phytophthora TaxID=4783 RepID=A0A833SFL8_PHYIN)

HSP 1 Score: 53.9 bits (128), Expect = 4.970e-5
Identity = 47/204 (23.04%), Postives = 82/204 (40.20%), Query Frame = 0 
Query:    8 PEYHWAEVCKRMRLERVRSLDKVYVHGAHGTKCYFLLRGLARVLMPEDDP--------------------------TNPGGVRYHPDM-DLGPGDLFGDDVLEGSGVAKKRNGTVVA---VTDCEFAVLDAPDYSDVRDRGLSQMTLDDKCHFLKSVAMMRTSSTYHLYKIALLVKTDDAVKDSVILRCDEPSKALYFIVSGTV 181
            PEY   E+C++MRL +V+S   V   G  G +CY ++ GL  V +  + P                           NP  V +   + +LGPG +FG+ VL     + KRN T+ A      C+   L+  DY  +      + +  +    L  + + R        ++   +++     +  + R    +K +Y + SG V
Sbjct:   97 PEYIRREICRQMRLMKVKSGGLVIRQGDTGDRCYIVVDGLVDVYVKMEKPGEVVASPPPMLSTMKPRRTSWRLSSEVNPAPVDFGAMVANLGPGAMFGEIVL--LNPSAKRNATIKASQFTESCDLICLERADYIRLVRTASMEASHYNNAEVLDRMFLFRDWVKLEKMRLVSAMRSRHFTSNDYLYRAGTDAKWMYIVTSGEV 298
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BLAST of mRNA_L-elsbetiae_contig114.1222.1 vs. uniprot
Match: A0A848ZDX4_9PROT (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Inquilinus sp. TaxID=1932117 RepID=A0A848ZDX4_9PROT)

HSP 1 Score: 53.1 bits (126), Expect = 8.880e-5
Identity = 34/106 (32.08%), Postives = 51/106 (48.11%), Query Frame = 0 
Query:   13 AEVCKRMRLERVRSLDKVYVHGAHGTKCYFLLRGLARVLMPEDDPTNPGGVRYHPDMDLGPGDLFGD-DVLEGSGVAKKRNGTVVAVTDCEFAVLDAPDYSDVRDR 117
            AE+   +      +   V   G      YF+++G   V +P            H  +DLGPG+ FG+  +LEG     +RN T+  +TDC+F VL  PD+ D+ DR
Sbjct:  274 AEIAALLTPMHAPARYAVVRRGEETEALYFIVQGKVEVDLP------------HGSVDLGPGEFFGEMSLLEGMD---RRNATISTLTDCQFLVLQVPDFHDLVDR 364
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig114.1222.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LKS0_ECTSI6.970e-6277.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8M0_ECTSI6.920e-2781.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A833SFL8_PHYIN4.970e-523.04Cyclic nucleotide-binding domain n=7 Tax=Phytophth... [more]
A0A848ZDX4_9PROT8.880e-532.08Cyclic nucleotide-binding domain-containing protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000595Cyclic nucleotide-binding domainSMARTSM00100cnmp_10coord: 3..133
e-value: 0.0039
score: 26.4
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 136..209
score: 8.197
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 28..114
score: 11.534
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 119..208
e-value: 7.5E-9
score: 37.3
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 2..118
e-value: 3.3E-15
score: 57.8
NoneNo IPR availablePANTHERPTHR23011UNCHARACTERIZEDcoord: 5..187
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 120..195
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 5..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig114contigL-elsbetiae_contig114:1094..3987 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig114.1222.1mRNA_L-elsbetiae_contig114.1222.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig114 1094..3988 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig114.1222.1 ID=prot_L-elsbetiae_contig114.1222.1|Name=mRNA_L-elsbetiae_contig114.1222.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=209bp
QRYCTDWPEYHWAEVCKRMRLERVRSLDKVYVHGAHGTKCYFLLRGLARV
LMPEDDPTNPGGVRYHPDMDLGPGDLFGDDVLEGSGVAKKRNGTVVAVTD
CEFAVLDAPDYSDVRDRGLSQMTLDDKCHFLKSVAMMRTSSTYHLYKIAL
LVKTDDAVKDSVILRCDEPSKALYFIVSGTVEVIQLKKKRVRHRIAANTG
TGNTAGTTN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000595cNMP-bd_dom
IPR014710RmlC-like_jellyroll
IPR018490cNMP-bd-like