prot_L-elsbetiae_contig1110.993.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1110.993.1
Unique Nameprot_L-elsbetiae_contig1110.993.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length666
Homology
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BLAST of mRNA_L-elsbetiae_contig1110.993.1 vs. uniprot
Match: D7G4J8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4J8_ECTSI)

HSP 1 Score: 361 bits (926), Expect = 3.010e-113
Identity = 239/422 (56.64%), Postives = 276/422 (65.40%), Query Frame = 0 
Query:   37 MSTACLTATESGFFSFRQEVRAGGVPPDPSAPTDISVDYDITYGWRSMCSNAVVTYTDGRGVEQSSDPYSGCFGLGGVVPLELNIDGDSLDAILAAGTTMMADTGLAVALGHAVAAAVAATHILFFLLLFFNIDPAPVRGYLYMRGLGLMSALSSFYLLFTCVVTFFFAVKGGLDEHIDTSGGLRPSWGYVLTVIDVTLMVVVGMLACQDDEVDAAIATPQYTSSSRDEDTVKRASGKLLHLRSSRSGDTVGDASTSRNVP-ASASAAPKTTVGGMGGSTGITIGGGGAGARGAQPP-TAAVMGGLRVGGIGILHGGGDAGNTVRMSRAASSAAAHAAASAAFGDFTASSPAVSVGSGSGSVLSSWTDGVSALSPTHRESRAAGEEEEDVEEGRSVMSGRETTGSNSPTRTSGSVLDAALVA 456
            MSTACL+ATESG+FSF Q++    VP +  A   I +DY ITYGWRS C+     YT+  G E++ +  SGCFGL      E  ++ D  +A+LA G +M ADTGLAVALGHAVAAAVA+ HILFF+LL+FNIDPAPVRGYLYMRGLGLMSAL+SFYLLFTCVV+FFFA+KG LD ++ TS GLRPSW YVLTVIDVT+MVVVGMLACQD+EVDAAIATPQYTSSSRDEDTVKRA+GKLLHLRS +SGDT  +ASTS N P ASAS+APK TVG    S  I  GG G    GA PP TAA M GL          G           +AS A +                     S +GSVLSSWT GVSALSP HR S+                        +   R+SG +LDAAL A
Sbjct:    1 MSTACLSATESGYFSFDQQIHTSHVPDELDAEGGIDIDYQITYGWRSSCTWVRAEYTESNGEEKAKED-SGCFGLA-----EKELE-DETEAVLAGGRSMDADTGLAVALGHAVAAAVASIHILFFVLLYFNIDPAPVRGYLYMRGLGLMSALTSFYLLFTCVVSFFFAIKGSLDVNMSTSAGLRPSWAYVLTVIDVTIMVVVGMLACQDEEVDAAIATPQYTSSSRDEDTVKRANGKLLHLRS-KSGDTFCEASTSLNGPDASASSAPKATVG----SGNIMTGGSGVVFGGAHPPATAAAMSGL----------GXXXXXXXXXXESASPAGSE--------------------SENGSVLSSWTGGVSALSP-HRVSKDGDXXXXXXXXXXXXXXXXXGASGSGSLRSSGGILDAALHA 379
[Close]
BLAST of mRNA_L-elsbetiae_contig1110.993.1 vs. uniprot
Match: A0A6H5JHQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ9_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 8.420e-24
Identity = 115/247 (46.56%), Postives = 127/247 (51.42%), Query Frame = 0 
Query:  230 VIDVTLMVVVGMLACQDDEVDAAIATPQ----------------YTSSSRDEDTVKRASGKLLHLRSSRSGDTVGDASTSRNVP-ASASAAPKTTVGGMGGSTGITIGGGGAGARGAQPP-TAAVMGGLRVGGIGILHGGGDAGNTVRMSRAASSAAAHAAASAAFGDFTASSPAVSVGSGSGSVLSSWTDGVSALSPTHRESRAAGEEEEDVEEGRSVMSGR--ETTGSNSPTRTSGSVLDAALVA 456
            VIDVT+MVVVGMLACQD+EVDAAIATPQ                YTSSSRDEDTVKRA+GKLLHLRS +SGDT  +ASTS N P ASAS+APK TVG    S  I  GG G    GA P  TAA M GL  GG G+L G                +A                           VLSSWT+GVSALSP  R S+   E                 E   S    R+SG +LDAAL A
Sbjct:   12 VIDVTIMVVVGMLACQDEEVDAAIATPQIDTPRAVRLNSYLVFQYTSSSRDEDTVKRANGKLLHLRS-KSGDTFCEASTSLNGPDASASSAPKATVG----SGNIMTGGSGVVFGGAHPTATAAAMSGLGPGG-GMLPGXXXXXXXXXXXXXXXXSA---------------------------VLSSWTEGVSALSP-RRVSKDGDEXXXXXXXXXXXXXXXXXERGASGGSPRSSGGILDAALHA 224
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1110.993.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4J8_ECTSI3.010e-11356.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHQ9_9PHAE8.420e-2446.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..141
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 245..665
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 178..204
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 224..244
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 167..177
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..45
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..166
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 205..223
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 147..169
NoneNo IPR availableTMHMMTMhelixcoord: 182..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1110contigL-elsbetiae_contig1110:8889..18393 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1110.993.1mRNA_L-elsbetiae_contig1110.993.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1110 7969..18794 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1110.993.1 ID=prot_L-elsbetiae_contig1110.993.1|Name=mRNA_L-elsbetiae_contig1110.993.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=666bp
MIYRRPIRDVVEERHGRTCGVHVFLFYIAALSAVLAMSTACLTATESGFF
SFRQEVRAGGVPPDPSAPTDISVDYDITYGWRSMCSNAVVTYTDGRGVEQ
SSDPYSGCFGLGGVVPLELNIDGDSLDAILAAGTTMMADTGLAVALGHAV
AAAVAATHILFFLLLFFNIDPAPVRGYLYMRGLGLMSALSSFYLLFTCVV
TFFFAVKGGLDEHIDTSGGLRPSWGYVLTVIDVTLMVVVGMLACQDDEVD
AAIATPQYTSSSRDEDTVKRASGKLLHLRSSRSGDTVGDASTSRNVPASA
SAAPKTTVGGMGGSTGITIGGGGAGARGAQPPTAAVMGGLRVGGIGILHG
GGDAGNTVRMSRAASSAAAHAAASAAFGDFTASSPAVSVGSGSGSVLSSW
TDGVSALSPTHRESRAAGEEEEDVEEGRSVMSGRETTGSNSPTRTSGSVL
DAALVAAPGDHGGGGGGCEHGVGVQDQDEARISGYTEKDAGGTGRVDDDG
DRRDDGGTEGKASEGQRGDGASDPEAKAQAGVAPTPPPPPSSATAAAAAA
AGTQGRDPERLTAEPAAEAGAAPVSPHAPVPEGEEAEESALAAMLVPVAE
TVTDFFTARTVLTFANGEPDEDTLSLDAAEAGESRAGAGGSGGLRETFQH
RTPPPSGRFPAVEEV*
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