prot_L-elsbetiae_contig11008.913.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11008.913.1
Unique Nameprot_L-elsbetiae_contig11008.913.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length289
Homology
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BLAST of mRNA_L-elsbetiae_contig11008.913.1 vs. uniprot
Match: A0A6H5JE67_9PHAE (cGMP-dependent protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE67_9PHAE)

HSP 1 Score: 218 bits (556), Expect = 6.150e-61
Identity = 120/160 (75.00%), Postives = 128/160 (80.00%), Query Frame = 0 
Query:  137 EEAGLDMSDFEDLLLDHLKTTDYPAGEYIFREGDAPDGGLYFIVEGRVDVLVG--GWDSSSS-KEGGGVPTSPGRDGAXXXXGPGARSQP----YHAHTRVASMGPGDFFGEGGVVSSQPRGESVRAATPVKVINVSLASCHRMIDAPGKVSSSLRRVAL 289
            EE GLDMSDFEDLLLDHLKTT+Y  GE++FREGDAPDGGLYFIVEGRVDVLV   GW SS +  EGG  P +   D           SQP    +HAHTRVASMGPGDFFGEGGVVS+QPRGESVRA TPVKV+NVSLASCHRMIDAPGKVSSSLRRVAL
Sbjct:  777 EEDGLDMSDFEDLLLDHLKTTEYTPGEFVFREGDAPDGGLYFIVEGRVDVLVNSAGWQSSGAGDEGGSSPDTTNAD-----------SQPPTPAHHAHTRVASMGPGDFFGEGGVVSAQPRGESVRAVTPVKVMNVSLASCHRMIDAPGKVSSSLRRVAL 925
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BLAST of mRNA_L-elsbetiae_contig11008.913.1 vs. uniprot
Match: D7G5Y1_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y1_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 3.760e-43
Identity = 95/129 (73.64%), Postives = 100/129 (77.52%), Query Frame = 0 
Query:  168 EGDAPDGGLYFIVEGRVDVLVG--GWDSSSS-KEGGGVPTSPGRDGAXXXXGPGARSQP----YHAHTRVASMGPGDFFGEGGVVSSQPRGESVRAATPVKVINVSLASCHRMIDAPGKVSSSLRRVAL 289
            EGDAPDGGLYFIVEGRVDVLV   GW SS +  EGG  P +   D           S+P    +HAHTRVASMGPGDFFGEGGVVS+QPRGESVRA TPVKVINVSLASCHRMIDAPGKVSSSLRRVAL
Sbjct:  576 EGDAPDGGLYFIVEGRVDVLVNSAGWQSSGAGDEGGSSPATTNAD-----------SRPPTPIHHAHTRVASMGPGDFFGEGGVVSAQPRGESVRAVTPVKVINVSLASCHRMIDAPGKVSSSLRRVAL 693
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BLAST of mRNA_L-elsbetiae_contig11008.913.1 vs. uniprot
Match: D8LCM8_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCM8_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 3.170e-24
Identity = 47/52 (90.38%), Postives = 50/52 (96.15%), Query Frame = 0 
Query:  137 EEAGLDMSDFEDLLLDHLKTTDYPAGEYIFREGDAPDGGLYFIVEGRVDVLV 188
            EE GLDMSDFEDLLLDHLKTT+YP GE++FREGDAPDGGLYFIVEGRVDVLV
Sbjct:   18 EEDGLDMSDFEDLLLDHLKTTEYPPGEFVFREGDAPDGGLYFIVEGRVDVLV 69
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BLAST of mRNA_L-elsbetiae_contig11008.913.1 vs. uniprot
Match: A0A836CF38_9STRA (cGMP-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF38_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.710e-22
Identity = 66/151 (43.71%), Postives = 84/151 (55.63%), Query Frame = 0 
Query:  138 EAGLDMSDFEDLLLDHLKTTDYPAGEYIFREGDAPDGGLYFIVEGRVDVLVGGWDSSSSKEGGGVPTSPGRDGAXXXXGPGARSQPYHAHTRVASMGPGDFFGEGGVVSSQPRGESVRAATPVKVINVSLASCHRMIDAPGKVSSSLRRVA 288
            + GLD+ +FE  LL +L    +PAG Y+FREGD  D  +YFI  G+V+VLV G              SPG++ A                TRV  MG GDFFGEGG+V + PR  S+RA TP+K+I V   SC RM+   G  SS+LR VA
Sbjct:  405 DGGLDLEEFE-RLLSNLTPLSFPAGAYVFREGDPADA-MYFITSGKVEVLVEGH------------ASPGQEKAL---------------TRVDVMGAGDFFGEGGLVLNAPRSASIRAVTPIKLIRVEKDSCQRMLKTTGAASSNLREVA 526
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BLAST of mRNA_L-elsbetiae_contig11008.913.1 vs. uniprot
Match: D8LCM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCM7_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 3.330e-22
Identity = 52/57 (91.23%), Postives = 53/57 (92.98%), Query Frame = 0 
Query:  233 MGPGDFFGEGGVVSSQPRGESVRAATPVKVINVSLASCHRMIDAPGKVSSSLRRVAL 289
            MGPGDFF EGGVVS+QPRGESVRA  PVKVINVSLASC RMIDAPGKVSSSLRRVAL
Sbjct:    1 MGPGDFFCEGGVVSAQPRGESVRAVIPVKVINVSLASCRRMIDAPGKVSSSLRRVAL 57
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BLAST of mRNA_L-elsbetiae_contig11008.913.1 vs. uniprot
Match: A0A257TK67_9BACT (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Planctomycetia bacterium 21-64-5 TaxID=1970542 RepID=A0A257TK67_9BACT)

HSP 1 Score: 56.6 bits (135), Expect = 2.650e-6
Identity = 42/130 (32.31%), Postives = 60/130 (46.15%), Query Frame = 0 
Query:  159 YPAGEYIFREGDAPDGGLYFIVEGRVDVLVGGWDSSSSKEGGGVPTSPGRDGAXXXXGPGARSQPYHAHTR-VASMGPGDFFGEGGVVSSQPRGESVRAATPVKVINVSLASCHRMIDAPGKVSSSLRRV 287
            + AG+ + R+GD P   LY I  G+ +V V       +K+G                            TR VA++GPGDFFGE  ++S +PR  +VRA  P++V  +      R+IDA       LRRV
Sbjct:   55 FAAGDVVIRQGD-PGDKLYVIRSGKAEVHV-------TKDG---------------------------QTRQVATLGPGDFFGEAALISGEPRNATVRAGEPLEVYTLGKDDFKRVIDASPPFRDVLRRV 149
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11008.913.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JE67_9PHAE6.150e-6175.00cGMP-dependent protein kinase n=1 Tax=Ectocarpus s... [more]
D7G5Y1_ECTSI3.760e-4373.64cGMP-dependent protein kinase n=1 Tax=Ectocarpus s... [more]
D8LCM8_ECTSI3.170e-2490.38Cyclic nucleotide-binding domain-containing protei... [more]
A0A836CF38_9STRA2.710e-2243.71cGMP-dependent protein kinase n=1 Tax=Tribonema mi... [more]
D8LCM7_ECTSI3.330e-2291.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A257TK67_9BACT2.650e-632.31Cyclic nucleotide-binding domain-containing protei... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000595Cyclic nucleotide-binding domainSMARTSM00100cnmp_10coord: 137..289
e-value: 1.1E-6
score: 38.2
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 150..274
score: 14.89
NoneNo IPR availablePANTHERPTHR45638FAMILY NOT NAMEDcoord: 145..262
NoneNo IPR availablePANTHERPTHR45638:SF11CYCLIC NUCLEOTIDE-GATED POTASSIUM CHANNELcoord: 145..262
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 148..274

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11008contigL-elsbetiae_contig11008:565..5734 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11008.913.1mRNA_L-elsbetiae_contig11008.913.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11008 565..5734 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11008.913.1 ID=prot_L-elsbetiae_contig11008.913.1|Name=mRNA_L-elsbetiae_contig11008.913.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=289bp
RRFRRPHSGKTPAPEKDGAAAAPGAAAAVGNSSGGGGGGVVAAAAAAAVV
TGSGGGGGGGSSTERPTVVLQARPAAAAPSDAGGVETSGEAEVDRRSATA
GAAAAAATAAAAAADTTAAPPEPEPETAAAAAAAGVEEAGLDMSDFEDLL
LDHLKTTDYPAGEYIFREGDAPDGGLYFIVEGRVDVLVGGWDSSSSKEGG
GVPTSPGRDGAPTSPGPGARSQPYHAHTRVASMGPGDFFGEGGVVSSQPR
GESVRAATPVKVINVSLASCHRMIDAPGKVSSSLRRVAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000595cNMP-bd_dom
IPR018490cNMP-bd-like