prot_L-elsbetiae_contig11.895.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig11.895.1
Unique Nameprot_L-elsbetiae_contig11.895.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length233
Homology
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BLAST of mRNA_L-elsbetiae_contig11.895.1 vs. uniprot
Match: A0A6H5JJY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY2_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.760e-17
Identity = 71/132 (53.79%), Postives = 80/132 (60.61%), Query Frame = 0 
Query:  110 KRKP-PQGAAGKTTLLPSVDDLFSSTAGPDFLTAPGAGEEFVVKATKKEXXXXXXXXXXXXXXXXXXXXXXXXX------KRERDIAAGTGXXXXXGAKKLKGGAAGPTGPPVDRAKG-GSKEKVSAKDKVK 233
            +R P P G +G  +LLPSV DLFSSTAGPDFL APGAG++F+VKA KKE                XXXXXXXXX      KRERD+AAG       G KK KGG        VD+ K  G KEK+SAKDKVK
Sbjct:  105 RRNPSPAGNSGGGSLLPSVSDLFSSTAGPDFLNAPGAGQDFIVKAMKKEKKKQTAAEATTGDPTAXXXXXXXXXXXGATAKRERDVAAGV-RGTAVGVKKPKGGXXXXXXXXVDKRKAAGGKEKISAKDKVK 235
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BLAST of mRNA_L-elsbetiae_contig11.895.1 vs. uniprot
Match: D7G8J9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8J9_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 1.230e-8
Identity = 36/52 (69.23%), Postives = 39/52 (75.00%), Query Frame = 0 
Query:  183 KRERDIAAGTGXXXXXGAKKLKGGAAGPTGPPVDRAKG-GSKEKVSAKDKVK 233
            KRERD+AAG G     G KK KGGAAGP GPPVD+ K  G KEK+SAKDKVK
Sbjct:   31 KRERDVAAGVGGTAV-GVKKPKGGAAGPAGPPVDKRKAAGDKEKISAKDKVK 81
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11.895.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJY2_9PHAE1.760e-1753.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8J9_ECTSI1.230e-869.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11contigL-elsbetiae_contig11:28626..29324 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11.895.1mRNA_L-elsbetiae_contig11.895.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig11 28626..30379 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig11.895.1 ID=prot_L-elsbetiae_contig11.895.1|Name=mRNA_L-elsbetiae_contig11.895.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=233bp
MSLSGLVGGYGSDDSDSASSADNDDVGKRGVNEGSSGKEKKSTAPASGGA
ASAPAGGGGKGPQKTANTKDSSSSGSDSDSSSGSSEEDNSGLEDGTAGGG
RGGRKHGEGKRKPPQGAAGKTTLLPSVDDLFSSTAGPDFLTAPGAGEEFV
VKATKKEKKKQPAGPSSSSTGATGTGAAAAAAKRERDIAAGTGGAAAVGA
KKLKGGAAGPTGPPVDRAKGGSKEKVSAKDKVK
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