prot_L-elsbetiae_contig10968.870.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10968.870.1
Unique Nameprot_L-elsbetiae_contig10968.870.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length70
Homology
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BLAST of mRNA_L-elsbetiae_contig10968.870.1 vs. uniprot
Match: A0A086TF94_ACRC1 (Galactose oxidase-like protein n=1 Tax=Acremonium chrysogenum (strain ATCC 11550 / CBS 779.69 / DSM 880 / IAM 14645 / JCM 23072 / IMI 49137) TaxID=857340 RepID=A0A086TF94_ACRC1)

HSP 1 Score: 52.8 bits (125), Expect = 2.660e-6
Identity = 25/69 (36.23%), Postives = 35/69 (50.72%), Query Frame = 0 
Query:    1 PQACLKTCIADAAFKTSYFALAEGSACYCGNPQPVDE------ERGICEEPCAGDVSSMCGGVKSFDLY 63
            P  C   C   A F     A+  G+ CYCG+P  +D       + G+C+ PCAG+ ++MCGG  S   Y
Sbjct:   52 PMVCTNAC---AEFGYMAAAMGHGNICYCGDPANIDTAGAKFVDEGLCDIPCAGNGTAMCGGGSSLSTY 117
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BLAST of mRNA_L-elsbetiae_contig10968.870.1 vs. uniprot
Match: A0A6H5KL41_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL41_9PHAE)

HSP 1 Score: 50.4 bits (119), Expect = 1.240e-5
Identity = 21/52 (40.38%), Postives = 29/52 (55.77%), Query Frame = 0 
Query:   19 FALAEGSACYCGNPQPV----DEERGICEEPCAGDVSSMCGGVKSFDLYEIA 66
            FA+  G  C C          D + G+C+ PC GD S  CGGV SFD+Y+++
Sbjct:  138 FAVTRGDLCTCFTEADTGIFDDRKGGVCDAPCTGDSSQPCGGVDSFDVYQLS 189
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BLAST of mRNA_L-elsbetiae_contig10968.870.1 vs. uniprot
Match: A0A8K0TT44_9PEZI (WSC domain-containing protein n=1 Tax=Plectosphaerella cucumerina TaxID=40658 RepID=A0A8K0TT44_9PEZI)

HSP 1 Score: 49.7 bits (117), Expect = 3.210e-5
Identity = 29/68 (42.65%), Postives = 34/68 (50.00%), Query Frame = 0 
Query:    5 LKTCIA---DAAFKTSYFALAEGSACYCGNP-----QPVDEERGICEEPCAGDVSSMCGGVKSFDLYE 64
            ++TCIA   D  +K  Y  L     CYCGN       PV    G+CE PC GD S +CGG     LYE
Sbjct:  386 VETCIAFCNDRGYK--YAGLEYQRECYCGNDVAADRAPVKGILGVCEMPCKGDNSQICGGYGGLSLYE 451
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10968.870.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A086TF94_ACRC12.660e-636.23Galactose oxidase-like protein n=1 Tax=Acremonium ... [more]
A0A6H5KL41_9PHAE1.240e-540.38WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A8K0TT44_9PEZI3.210e-542.65WSC domain-containing protein n=1 Tax=Plectosphaer... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 1..56
e-value: 7.5E-9
score: 35.7
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 1..66
score: 8.607

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10968contigL-elsbetiae_contig10968:6282..6491 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10968.870.1mRNA_L-elsbetiae_contig10968.870.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10968 6282..6491 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10968.870.1 ID=prot_L-elsbetiae_contig10968.870.1|Name=mRNA_L-elsbetiae_contig10968.870.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=70bp
PQACLKTCIADAAFKTSYFALAEGSACYCGNPQPVDEERGICEEPCAGDV
SSMCGGVKSFDLYEIADNSL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd