prot_L-elsbetiae_contig10967.869.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10967.869.1
Unique Nameprot_L-elsbetiae_contig10967.869.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length108
Homology
BLAST of mRNA_L-elsbetiae_contig10967.869.1 vs. uniprot
Match: D7FL45_ECTSI (Plastoquinol--plastocyanin reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL45_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 9.750e-30
Identity = 49/55 (89.09%), Postives = 53/55 (96.36%), Query Frame = 0
Query:   20 LQGDATYLVVKEDKTIQDYGIVAVCTHLGCVVPWSKAENKFMCPCHGSQYDQTGK 74
            ++GDATYLVV EDK +QDYGIVAVCTHLGCVVPW+KAENKFMCPCHGSQYDQTGK
Sbjct:  130 IKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGK 184          
BLAST of mRNA_L-elsbetiae_contig10967.869.1 vs. uniprot
Match: F0YEX1_AURAN (Uncharacterized protein petC n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEX1_AURAN)

HSP 1 Score: 110 bits (276), Expect = 1.040e-28
Identity = 47/58 (81.03%), Postives = 53/58 (91.38%), Query Frame = 0
Query:   17 LMALQGDATYLVVKEDKTIQDYGIVAVCTHLGCVVPWSKAENKFMCPCHGSQYDQTGK 74
            +  L+GDATYL+V EDKTI+DYGI AVCTHLGCVVPW+KA NK+MCPCHGSQYDQTGK
Sbjct:   70 VQGLKGDATYLIVDEDKTIRDYGINAVCTHLGCVVPWNKAANKYMCPCHGSQYDQTGK 127          
BLAST of mRNA_L-elsbetiae_contig10967.869.1 vs. uniprot
Match: W7TXJ0_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXJ0_9STRA)

HSP 1 Score: 110 bits (275), Expect = 8.360e-28
Identity = 46/67 (68.66%), Postives = 58/67 (86.57%), Query Frame = 0
Query:    8 TYEISFNCTLMALQGDATYLVVKEDKTIQDYGIVAVCTHLGCVVPWSKAENKFMCPCHGSQYDQTGK 74
            T++      +  L+GDATYL+VKEDKTI++YG+ AVCTHLGCVVPW+KAE+KF+CPCHGSQYD+TGK
Sbjct:  130 THQAGDRSLVQGLKGDATYLIVKEDKTIENYGLNAVCTHLGCVVPWNKAESKFICPCHGSQYDKTGK 196          
BLAST of mRNA_L-elsbetiae_contig10967.869.1 vs. uniprot
Match: A0A830H9Z6_9CHLO (Cytochrome b6-f complex iron-sulfur subunit 1 n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830H9Z6_9CHLO)

HSP 1 Score: 107 bits (266), Expect = 7.330e-27
Identity = 45/57 (78.95%), Postives = 51/57 (89.47%), Query Frame = 0
Query:   17 LMALQGDATYLVVKEDKTIQDYGIVAVCTHLGCVVPWSKAENKFMCPCHGSQYDQTG 73
            +  L+GDATYL+VKEDKTI+ YG+ AVCTHLGCVVPW+ AENKFMCPCHGSQYD TG
Sbjct:   99 VQGLKGDATYLIVKEDKTIEKYGLNAVCTHLGCVVPWNAAENKFMCPCHGSQYDATG 155          
BLAST of mRNA_L-elsbetiae_contig10967.869.1 vs. uniprot
Match: A0A2D5MSC7_9BACT (Cytochrome b6-f complex iron-sulfur subunit n=1 Tax=Verrucomicrobiales bacterium TaxID=2026801 RepID=A0A2D5MSC7_9BACT)

HSP 1 Score: 106 bits (264), Expect = 1.230e-26
Identity = 45/58 (77.59%), Postives = 52/58 (89.66%), Query Frame = 0
Query:   17 LMALQGDATYLVVKEDKTIQDYGIVAVCTHLGCVVPWSKAENKFMCPCHGSQYDQTGK 74
            +  L+GDATYLVV EDK I+DYGI AVCTHLGCVVPW+K+ NKFMCPCHGSQYD++GK
Sbjct:   93 VQGLKGDATYLVVDEDKKIRDYGINAVCTHLGCVVPWNKSANKFMCPCHGSQYDESGK 150          
BLAST of mRNA_L-elsbetiae_contig10967.869.1 vs. uniprot
Match: A0A7S3NJN7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJN7_9STRA)

HSP 1 Score: 106 bits (264), Expect = 2.160e-26
Identity = 45/58 (77.59%), Postives = 51/58 (87.93%), Query Frame = 0
Query:   17 LMALQGDATYLVVKEDKTIQDYGIVAVCTHLGCVVPWSKAENKFMCPCHGSQYDQTGK 74
            +  L+GDATYL+V E K I+DYGI AVCTHLGCVVPW+KA NK+MCPCHGSQYDQTGK
Sbjct:  116 VQGLKGDATYLIVDEGKVIRDYGINAVCTHLGCVVPWNKAANKYMCPCHGSQYDQTGK 173          
BLAST of mRNA_L-elsbetiae_contig10967.869.1 vs. uniprot
Match: UPI00202003BD (cytochrome b6-f complex iron-sulfur subunit n=1 Tax=Chroococcidiopsis sp. CCMEE 29 TaxID=155894 RepID=UPI00202003BD)

HSP 1 Score: 104 bits (260), Expect = 3.720e-26
Identity = 43/58 (74.14%), Postives = 51/58 (87.93%), Query Frame = 0
Query:   17 LMALQGDATYLVVKEDKTIQDYGIVAVCTHLGCVVPWSKAENKFMCPCHGSQYDQTGK 74
            +  L+GD TYL+V EDKTI++YG+ AVCTHLGCVVPW+ +ENKFMCPCHGSQYD TGK
Sbjct:   82 VQGLKGDPTYLIVTEDKTIENYGLNAVCTHLGCVVPWNASENKFMCPCHGSQYDNTGK 139          
BLAST of mRNA_L-elsbetiae_contig10967.869.1 vs. uniprot
Match: A0A836CBH8_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBH8_9STRA)

HSP 1 Score: 105 bits (262), Expect = 5.210e-26
Identity = 44/55 (80.00%), Postives = 51/55 (92.73%), Query Frame = 0
Query:   20 LQGDATYLVVKEDKTIQDYGIVAVCTHLGCVVPWSKAENKFMCPCHGSQYDQTGK 74
            ++GDATYL VK+DKTIQD+GIVAVCTHLGCVVPW +AENKF+CPCHGSQY+  GK
Sbjct:  127 IKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNMDGK 181          
BLAST of mRNA_L-elsbetiae_contig10967.869.1 vs. uniprot
Match: UPI001A0BDCC3 (Cytochrome b6-f complex iron-sulfur subunit n=1 Tax=filamentous cyanobacterium LEGE 11480 TaxID=2777977 RepID=UPI001A0BDCC3)

HSP 1 Score: 103 bits (258), Expect = 7.250e-26
Identity = 44/55 (80.00%), Postives = 49/55 (89.09%), Query Frame = 0
Query:   20 LQGDATYLVVKEDKTIQDYGIVAVCTHLGCVVPWSKAENKFMCPCHGSQYDQTGK 74
            L+GD TYLVVKED +I+ YGI A+CTHLGCVVPW+ AENKFMCPCHGSQYD TGK
Sbjct:   84 LKGDPTYLVVKEDLSIESYGINAICTHLGCVVPWNPAENKFMCPCHGSQYDSTGK 138          
BLAST of mRNA_L-elsbetiae_contig10967.869.1 vs. uniprot
Match: UPI0016892698 (cytochrome b6-f complex iron-sulfur subunit n=1 Tax=unclassified Planktothrix TaxID=2648599 RepID=UPI0016892698)

HSP 1 Score: 103 bits (258), Expect = 7.250e-26
Identity = 44/55 (80.00%), Postives = 48/55 (87.27%), Query Frame = 0
Query:   20 LQGDATYLVVKEDKTIQDYGIVAVCTHLGCVVPWSKAENKFMCPCHGSQYDQTGK 74
            L+GD TY+VVKEDK I DYGI A+CTHLGCVVPW+ AENKF CPCHGSQYD TGK
Sbjct:   84 LKGDPTYIVVKEDKAIADYGINAICTHLGCVVPWNVAENKFKCPCHGSQYDSTGK 138          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10967.869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL45_ECTSI9.750e-3089.09Plastoquinol--plastocyanin reductase n=2 Tax=Ectoc... [more]
F0YEX1_AURAN1.040e-2881.03Uncharacterized protein petC n=1 Tax=Aureococcus a... [more]
W7TXJ0_9STRA8.360e-2868.66Plastoquinol--plastocyanin reductase n=2 Tax=Monod... [more]
A0A830H9Z6_9CHLO7.330e-2778.95Cytochrome b6-f complex iron-sulfur subunit 1 n=1 ... [more]
A0A2D5MSC7_9BACT1.230e-2677.59Cytochrome b6-f complex iron-sulfur subunit n=1 Ta... [more]
A0A7S3NJN7_9STRA2.160e-2677.59Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
UPI00202003BD3.720e-2674.14cytochrome b6-f complex iron-sulfur subunit n=1 Ta... [more]
A0A836CBH8_9STRA5.210e-2680.00Plastoquinol--plastocyanin reductase n=1 Tax=Tribo... [more]
UPI001A0BDCC37.250e-2680.00Cytochrome b6-f complex iron-sulfur subunit n=1 Ta... [more]
UPI00168926987.250e-2680.00cytochrome b6-f complex iron-sulfur subunit n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005805Rieske iron-sulphur protein, C-terminalPRINTSPR00162RIESKEcoord: 60..72
score: 63.46
coord: 39..50
score: 66.04
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 22..75
e-value: 1.3E-9
score: 37.8
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 22..100
score: 15.145
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 10..79
e-value: 1.6E-21
score: 78.2
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 21..75
IPR014349Rieske iron-sulphur proteinPANTHERPTHR10134CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIALcoord: 19..74
NoneNo IPR availablePANTHERPTHR10134:SF5CYTOCHROME B6-F COMPLEX IRON-SULFUR SUBUNIT, CHLOROPLASTICcoord: 19..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10967contigL-elsbetiae_contig10967:1551..1874 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10967.869.1mRNA_L-elsbetiae_contig10967.869.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10967 886..2082 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10967.869.1 ID=prot_L-elsbetiae_contig10967.869.1|Name=mRNA_L-elsbetiae_contig10967.869.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=108bp
MKVELRFTYEISFNCTLMALQGDATYLVVKEDKTIQDYGIVAVCTHLGCV
VPWSKAENKFMCPCHGSQYDQTGKASCCFFMLLRLVSAWRLEVAGLRIVT
VFSVLCT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005805Rieske_Fe-S_prot_C
IPR017941Rieske_2Fe-2S
IPR036922Rieske_2Fe-2S_sf
IPR014349Rieske_Fe-S_prot