prot_L-elsbetiae_contig10952.858.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10952.858.1
Unique Nameprot_L-elsbetiae_contig10952.858.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length287
Homology
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BLAST of mRNA_L-elsbetiae_contig10952.858.1 vs. uniprot
Match: D8LEB0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEB0_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 8.420e-5
Identity = 93/218 (42.66%), Postives = 110/218 (50.46%), Query Frame = 0 
Query:    7 RPKAAVGESTTKESSKGLAWWRPR---RSNLADLSNTSSASTSIXXXXXXXXXXXXHRHGLVEAS--------PSSANRLLFDDPATEGERGAAGLPTRPFETQQKPPRADGKQQLWTRGSREGTAAPSPEEERDDHNDANTDTDKTATAGAPPLLLPAYXXXXXXXXXXXXXXXXLLGSSSSGKLKSLKLAPPTG-----YSASSAATTDRSPGTPV 208
            +PK       +K++S G AWWRPR   R++LAD+S  S+ +TS+  XXXXXXXXXX                 PSS    LFD         AA    + FETQ KP         WTRGSR+GT APSP+E      D                     XXXXXXXXXXXX    LLGSSS GKLKSLKLAP        ++A++AA     PGTPV
Sbjct:   17 QPKDVGHSEVSKQNSNGFAWWRPRSILRASLADVS-LSTTNTSVVSXXXXXXXXXXXXXXXXXXXXXXXXXXXPSS----LFDV--------AAAAQQQQFETQLKPKIQH--HSNWTRGSRDGTEAPSPDE------DDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEQGLLGSSS-GKLKSLKLAPIGSEQLAKHTAAAAAVDSDRPGTPV 212
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10952.858.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEB0_ECTSI8.420e-542.66Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10952contigL-elsbetiae_contig10952:1825..2713 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10952.858.1mRNA_L-elsbetiae_contig10952.858.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10952 1594..2713 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10952.858.1 ID=prot_L-elsbetiae_contig10952.858.1|Name=mRNA_L-elsbetiae_contig10952.858.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=287bp
MDALHDRPKAAVGESTTKESSKGLAWWRPRRSNLADLSNTSSASTSIIST
SSPPQRPHHHRHGLVEASPSSANRLLFDDPATEGERGAAGLPTRPFETQQ
KPPRADGKQQLWTRGSREGTAAPSPEEERDDHNDANTDTDKTATAGAPPL
LLPAYSSSSSAARRRRPQGGDLLGSSSSGKLKSLKLAPPTGYSASSAATT
DRSPGTPVTSVGSSDASEGTWTESLGRAKGRRFDSSSSSSSKDGGRRNTA
AAARPRRSHRAPGRLEKTKSGSTPTAARRRRSTAVEQ
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