prot_L-elsbetiae_contig1094.848.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1094.848.1
Unique Nameprot_L-elsbetiae_contig1094.848.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length321
Homology
BLAST of mRNA_L-elsbetiae_contig1094.848.1 vs. uniprot
Match: A0A6H5JJS4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJS4_9PHAE)

HSP 1 Score: 501 bits (1290), Expect = 3.570e-167
Identity = 253/324 (78.09%), Postives = 275/324 (84.88%), Query Frame = 0
Query:    1 QRVRRDNAGAKGKIPSQRESLRTIAAACTWTKVFGTPEGVVPACPRPRPAKGEEMYDPQATMILTPELRQTFVALWVEGDGNCFWPSLARALWGTDKYWRQLKLAVLAWSAVNVEALVGKGGALFENG--IHYTEEIHGKHVYRGPNGEIDHTRDDYASMLLETTAKFSGNKQWGGSLAGVLFAERTGLVLKLPHPFDMRARIKADASGAAPTGTASYGGRS-DQFGDNRLSLLKVPTGDRKEILLRGVSGELDIVVEEIAITIVRGTSAVVGDESLFDIPVIEADTNLEPLNHFAAIVCADSDVHVRRPFPMSKAGPPLHTKF 321
            QR RR+NAGAKG+IPSQRE LR IAA CTW KVFGTPEGVVP   RP   KG+EMYDP+ATMILTPELR+TFVALWVEGDGNCFW S+A+ALWGTD+YWRQLKLAVLAWSAVNVEALVG+GGALF     IHY +EIH KH+YRGP+G++DH  DD ASMLLE+ AKFS N+QWGG LAGVLF ERTGLVLK+PHPFDMRARI+AD SGAA   TASYGG S D+FGD+R S  KVPT  RKEI+LRGVS E DIVVEEIAIT+    SAVVGD SL DIPVIEADTNL  LNHFAAIVCAD DVHVRRPFPMSKAGPPLH KF
Sbjct:   33 QRARRENAGAKGRIPSQREYLRAIAAECTWPKVFGTPEGVVPTVARP--GKGQEMYDPKATMILTPELRKTFVALWVEGDGNCFWRSMAKALWGTDEYWRQLKLAVLAWSAVNVEALVGEGGALFGRAGIIHYDDEIHAKHIYRGPDGKVDHRLDDDASMLLESIAKFSANRQWGGCLAGVLFTERTGLVLKMPHPFDMRARIRADTSGAAAKATASYGGGSEDEFGDHRYSFTKVPTAGRKEIILRGVSDEEDIVVEEIAITMASYDSAVVGDGSLSDIPVIEADTNLNHLNHFAAIVCADPDVHVRRPFPMSKAGPPLHAKF 354          
BLAST of mRNA_L-elsbetiae_contig1094.848.1 vs. uniprot
Match: A0A6H5K454_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K454_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 3.580e-25
Identity = 82/255 (32.16%), Postives = 125/255 (49.02%), Query Frame = 0
Query:   69 RQTFVALWVEGDGNCFWPSLARALWGTDKYWRQLKLAVLAWSAVNVEALVGKGGALFENGIHYTEEIHGKHVYR------GPNGEIDHTRDDYASMLLETTAKFSGNKQWGGSLAGVLFAERTGLVLKLPHPFDMRARIKADASGAAPTGTASYGGRSDQFGDNRLSLLKVPTGDRKEILLRGVSGELDIVVEEIAITIVRGTSAVVGDESLFDIPVIEADTNLEPLNHFAAIVCADSDVHVRRPFPMSKAGPPL 317
            ++ +VALWV GDGNC W SLA+ LW +D+YW QLKL VLAW+A + E LV +G  L +  +H++++IH    Y       G    +  T    + MLL + A    +  WGG    +L ++   + +KL  P D+  R K D S A P      G + D+  D RLS   +       + ++G  G   +    + +T   G ++V   ++L +   +   T      HFAA+   D       PFP+ +A PPL
Sbjct:    3 KEGWVALWVRGDGNCCWRSLAKCLWESDEYWSQLKLVVLAWAAAHAEELVSEGRVLSDFSLHFSDDIHAGLGYAYSATCVGAAPSVAQT----SRMLLASVAYDCEDTVWGGDFTLLLASQALKITVKLLSPNDVMVR-KRDESSATPGTIRGAGRKGDKVDDTRLSQTFLADDAVSCLHIQG--GGRMVAEATVVLTSCTGQASVGELDNLVE---VTKSTACPRGVHFAAVSKKDRSTP---PFPLVRAAPPL 244          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1094.848.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJS4_9PHAE3.570e-16778.09SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K454_9PHAE3.580e-2532.16SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.80coord: 50..143
e-value: 5.7E-5
score: 25.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1094contigL-elsbetiae_contig1094:25386..26606 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1094.848.1mRNA_L-elsbetiae_contig1094.848.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1094 25385..26606 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1094.848.1 ID=prot_L-elsbetiae_contig1094.848.1|Name=mRNA_L-elsbetiae_contig1094.848.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=321bp
QRVRRDNAGAKGKIPSQRESLRTIAAACTWTKVFGTPEGVVPACPRPRPA
KGEEMYDPQATMILTPELRQTFVALWVEGDGNCFWPSLARALWGTDKYWR
QLKLAVLAWSAVNVEALVGKGGALFENGIHYTEEIHGKHVYRGPNGEIDH
TRDDYASMLLETTAKFSGNKQWGGSLAGVLFAERTGLVLKLPHPFDMRAR
IKADASGAAPTGTASYGGRSDQFGDNRLSLLKVPTGDRKEILLRGVSGEL
DIVVEEIAITIVRGTSAVVGDESLFDIPVIEADTNLEPLNHFAAIVCADS
DVHVRRPFPMSKAGPPLHTKF
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