prot_L-elsbetiae_contig1094.847.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1094.847.1
Unique Nameprot_L-elsbetiae_contig1094.847.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length196
Homology
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BLAST of mRNA_L-elsbetiae_contig1094.847.1 vs. uniprot
Match: A0A6H5JJS4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJS4_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 1.100e-42
Identity = 93/115 (80.87%), Postives = 101/115 (87.83%), Query Frame = 0 
Query:    1 KEQDKGDGDGVDAATTGLEEAAAKQLPVYEESVLASELDAKKKARRYYELKEASSEAQKRSDTDKENKQLLWFSLTAEEELKKGRVSAAKARQAYEKALRNRNRALRALHKATLR 115
            KEQD GD DGVD AT   EEAAAKQLPVYEESVLA+ELDAKKKA RY+ELKEA S+A++RSD +KENKQL+WF L AEEEL KGRVSAAKAR+AYEKALRNRNRALRAL K TLR
Sbjct:  435 KEQDNGDEDGVDEATKKQEEAAAKQLPVYEESVLAAELDAKKKATRYHELKEALSQARQRSDANKENKQLVWFCLAAEEELGKGRVSAAKARRAYEKALRNRNRALRALGKITLR 549
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1094.847.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JJS4_9PHAE1.100e-4280.87SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 88..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1094contigL-elsbetiae_contig1094:23403..24872 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1094.847.1mRNA_L-elsbetiae_contig1094.847.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1094 23121..24872 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1094.847.1 ID=prot_L-elsbetiae_contig1094.847.1|Name=mRNA_L-elsbetiae_contig1094.847.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=196bp
KEQDKGDGDGVDAATTGLEEAAAKQLPVYEESVLASELDAKKKARRYYEL
KEASSEAQKRSDTDKENKQLLWFSLTAEEELKKGRVSAAKARQAYEKALR
NRNRALRALHKATLRRCVRCYRGGMLRRLVGDLSSRQGLRLRRLRHGVPV
AEPQALVALLLPDDDDAQHDSDTEGGGDLRCVEERTTCEPPLFSG*
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