prot_L-elsbetiae_contig1092.836.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1092.836.1
Unique Nameprot_L-elsbetiae_contig1092.836.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length220
Homology
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BLAST of mRNA_L-elsbetiae_contig1092.836.1 vs. uniprot
Match: A0A6H5JGE4_9PHAE (Centrosomal protein of 44 kDa n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGE4_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 1.340e-36
Identity = 129/239 (53.97%), Postives = 143/239 (59.83%), Query Frame = 0 
Query:    6 GMLDTPVR---GVAAPAGGGAGSGGGSDWLAVQQAFGSPSSALHMPPAVVVPVSPPDAPAATGRPGSAADSPIPKLPPRPASVSATQSGSAVAA------AGPDCSNGXXXXR--------RDAAG--------ICRLFESERATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLTEELGKMQRQIEAMLERQSRSLEGRMGETEQMISARLALLETKVQGLEISSPLHT 219
            GML TP R      +PAG        SDWLAVQQAFGSPSSALHMPPAVVVP SPPDAPA +GR    AD+P+PKLPPRP+S S+    +AV+A      A  D  +     R        RD  G                   XXXXXXXXXXXXXXXX                     SL EELGKM++QIEAMLER S++LEGRMGETEQMISARLA+LETKV GLEI SPLHT
Sbjct:  475 GMLPTPARVGSSPGSPAGXXXXXXXXSDWLAVQQAFGSPSSALHMPPAVVVPTSPPDAPA-SGRGVVVADTPMPKLPPRPSSASSIGEAAAVSAVVDAGTAKVDSGSSSSSSRVMSPVGSGRDEEGRADKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADGGTSAAFGKDKDSGEDDDRSLAEELGKMRQQIEAMLERHSKTLEGRMGETEQMISARLAMLETKVHGLEIGSPLHT 712
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1092.836.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JGE4_9PHAE1.340e-3653.97Centrosomal protein of 44 kDa n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1092contigL-elsbetiae_contig1092:5142..5801 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1092.836.1mRNA_L-elsbetiae_contig1092.836.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1092 5005..5895 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1092.836.1 ID=prot_L-elsbetiae_contig1092.836.1|Name=mRNA_L-elsbetiae_contig1092.836.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=220bp
MNIGGGMLDTPVRGVAAPAGGGAGSGGGSDWLAVQQAFGSPSSALHMPPA
VVVPVSPPDAPAATGRPGSAADSPIPKLPPRPASVSATQSGSAVAAAGPD
CSNGGGGSRRDAAGICRLFESERATEQQQHAGTGGGGDTQQQQRRPGRGG
SGDGGGDEDDDSSLTEELGKMQRQIEAMLERQSRSLEGRMGETEQMISAR
LALLETKVQGLEISSPLHT*
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