prot_L-elsbetiae_contig10915.832.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10915.832.1
Unique Nameprot_L-elsbetiae_contig10915.832.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length231
Homology
BLAST of mRNA_L-elsbetiae_contig10915.832.1 vs. uniprot
Match: D8LN05_ECTSI (PHD-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN05_ECTSI)

HSP 1 Score: 236 bits (603), Expect = 1.400e-69
Identity = 142/163 (87.12%), Postives = 149/163 (91.41%), Query Frame = 0
Query:    2 FGKGEGNLLACSSEGCGRRFHMGCLEPPLSRTPKEGEWSCPVCRKRKAHAEREAKAQAKRDKKKRELAAKLAKSPVKTIKLEATDGPRNIIGIILPERSVESVCDALRGYEAELERQREASERRXXXXXXXXXXXXXXXXXAKLAKDAMQLEKRNKLKTK-HG 163
            FGKGEG LLAC  EGCGRRFHMGCL+PPLSRTPKEGEWSCP+CRKRKAHAEREAKAQAKRD+KKRELAAKLAKSPVKTIKLEATDGPRNIIGIILPERSVESVCDALRGYEAELE+QREA ERR  XXXXXXXXXXXXXXX    + AM+LE+RNK K K HG
Sbjct:  555 FGKGEGKLLACREEGCGRRFHMGCLKPPLSRTPKEGEWSCPICRKRKAHAEREAKAQAKRDQKKRELAAKLAKSPVKTIKLEATDGPRNIIGIILPERSVESVCDALRGYEAELEKQREAGERRERXXXXXXXXXXXXXXXXXXXQQAMKLEERNKQKGKAHG 717          
BLAST of mRNA_L-elsbetiae_contig10915.832.1 vs. uniprot
Match: A0A6H5KWU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU5_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 9.650e-66
Identity = 139/162 (85.80%), Postives = 146/162 (90.12%), Query Frame = 0
Query:    2 FGKGEGNLLACSSEGCGRRFHMGCLEPPLSRTPKEGEWSCPVCRKRKAHAEREAKAQAKRDKKKRELAAKLAKSPVKTIKLEATDGPRNIIGIILPERSVESVCDALRGYEAELERQREASERRXXXXXXXXXXXXXXXXXAKLAKDAMQLEKRNKLKTKHG 163
            FGKGEG LLAC  EGCGRRFHMGCL+PPLSRTPKEG+WSCP+CRKR AH EREAKAQAKRD+KKRELAAKLAKSPVKTIKLEATDGPRNIIGIILPERSVESVCDALRGYEAELE+QREA ERR XXXXXXXXXXXXXXXX      AM+LE+RNK K K G
Sbjct:  847 FGKGEGKLLACREEGCGRRFHMGCLKPPLSRTPKEGKWSCPICRKRTAHLEREAKAQAKRDQKKRELAAKLAKSPVKTIKLEATDGPRNIIGIILPERSVESVCDALRGYEAELEKQREAGERREXXXXXXXXXXXXXXXXXXXXXXAMKLEERNKQKGKVG 1008          
BLAST of mRNA_L-elsbetiae_contig10915.832.1 vs. uniprot
Match: A0A836EK64_9HYME (BAZ1A protein (Fragment) n=1 Tax=Acromyrmex insinuator TaxID=230686 RepID=A0A836EK64_9HYME)

HSP 1 Score: 57.0 bits (136), Expect = 8.870e-6
Identity = 24/45 (53.33%), Postives = 32/45 (71.11%), Query Frame = 0
Query:    4 KGEGNLLACSSEGCGRRFHMGCLEPPLSRTPKEGEWSCPVCRKRK 48
            K  G L+AC +  C  RFH+ C+EPPLSR P+ G WSC +C+K+K
Sbjct: 1189 KNGGKLIACDT--CPNRFHLECVEPPLSRAPR-GRWSCTICKKKK 1230          
BLAST of mRNA_L-elsbetiae_contig10915.832.1 vs. uniprot
Match: A0A6I9WE79_9HYME (bromodomain adjacent to zinc finger domain protein 1A isoform X1 n=3 Tax=Pogonomyrmex barbatus TaxID=144034 RepID=A0A6I9WE79_9HYME)

HSP 1 Score: 55.8 bits (133), Expect = 2.160e-5
Identity = 22/45 (48.89%), Postives = 33/45 (73.33%), Query Frame = 0
Query:    7 GNLLACSSEGCGRRFHMGCLEPPLSRTPKEGEWSCPVCRKRKAHA 51
            G L+AC +  C  R+H+ C+EPPLSR P+ G WSCP C++++ +A
Sbjct: 1195 GKLIACDT--CSNRYHLECIEPPLSRAPR-GRWSCPKCKEKRRNA 1236          
BLAST of mRNA_L-elsbetiae_contig10915.832.1 vs. uniprot
Match: R1DW16_EMIHU (PHD domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DW16_EMIHU)

HSP 1 Score: 52.0 bits (123), Expect = 8.450e-5
Identity = 25/50 (50.00%), Postives = 30/50 (60.00%), Query Frame = 0
Query:    9 LLACSSEGCGRRFHMGCLEPPLSRTPKEGEWSCPVCRKRKAHAEREAKAQ 58
            +L C  +GCGR +H+ CL PPL   P  GEW CP C    A AE E +AQ
Sbjct:    1 MLRCCGDGCGRSYHLFCLNPPLP-APPAGEWLCPGC----AAAEAEERAQ 45          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10915.832.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LN05_ECTSI1.400e-6987.12PHD-type domain-containing protein (Fragment) n=1 ... [more]
A0A6H5KWU5_9PHAE9.650e-6685.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836EK64_9HYME8.870e-653.33BAZ1A protein (Fragment) n=1 Tax=Acromyrmex insinu... [more]
A0A6I9WE79_9HYME2.160e-548.89bromodomain adjacent to zinc finger domain protein... [more]
R1DW16_EMIHU8.450e-550.00PHD domain-containing protein n=2 Tax=Emiliania hu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 101..149
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 3..45
e-value: 3.1E-7
score: 40.0
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 6..46
e-value: 1.3E-8
score: 34.6
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 1..47
score: 8.529
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 2..69
e-value: 3.1E-13
score: 51.1
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 5..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10915contigL-elsbetiae_contig10915:3427..5892 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10915.832.1mRNA_L-elsbetiae_contig10915.832.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10915 3427..5892 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10915.832.1 ID=prot_L-elsbetiae_contig10915.832.1|Name=mRNA_L-elsbetiae_contig10915.832.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=231bp
AFGKGEGNLLACSSEGCGRRFHMGCLEPPLSRTPKEGEWSCPVCRKRKAH
AEREAKAQAKRDKKKRELAAKLAKSPVKTIKLEATDGPRNIIGIILPERS
VESVCDALRGYEAELERQREASERREREAKEAREAAEKTRLEAKLAKDAM
QLEKRNKLKTKHGGGGGGGGVVKAEEEEEGSGYDDPESRAELLAGEMVQL
LRGGGGRAAKKAAMQQMKKGAQAGGGAGNRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR011011Znf_FYVE_PHD