prot_L-elsbetiae_contig10871.797.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10871.797.1
Unique Nameprot_L-elsbetiae_contig10871.797.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length150
Homology
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BLAST of mRNA_L-elsbetiae_contig10871.797.1 vs. uniprot
Match: D8LN43_ECTSI (DIS3-like exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN43_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 8.590e-19
Identity = 48/66 (72.73%), Postives = 51/66 (77.27%), Query Frame = 0 
Query:   17 LHSELSKLTGAAGALSMKQERHLAQLARVLPGTVVFFDKFCPDLHSADAGGLGG-TGPSEEEGGES 81
            LHSELSKLTGA GALSMKQER L+QLAR LPGT+VFFDKFCPDLH A AG   G T P E    E+
Sbjct:  127 LHSELSKLTGATGALSMKQERRLSQLARSLPGTMVFFDKFCPDLHGASAGATAGATDPGERSPSEA 192
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10871.797.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LN43_ECTSI8.590e-1972.73DIS3-like exonuclease 1 n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10871contigL-elsbetiae_contig10871:3020..3833 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10871.797.1mRNA_L-elsbetiae_contig10871.797.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10871 3018..3833 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10871.797.1 ID=prot_L-elsbetiae_contig10871.797.1|Name=mRNA_L-elsbetiae_contig10871.797.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=150bp
GGGGEEGQHVGCSLLLLHSELSKLTGAAGALSMKQERHLAQLARVLPGTV
VFFDKFCPDLHSADAGGLGGTGPSEEEGGESADGTPPPPPPPPRPLAVAP
STAMAAACGWCSVKLGNALVVVLSEDGDDDEADDRVGDDDHGGSAAAAGR
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