prot_L-elsbetiae_contig10841.778.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10841.778.1
Unique Nameprot_L-elsbetiae_contig10841.778.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length277
Homology
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BLAST of mRNA_L-elsbetiae_contig10841.778.1 vs. uniprot
Match: D8LQG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQG4_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 9.460e-32
Identity = 92/193 (47.67%), Postives = 111/193 (57.51%), Query Frame = 0 
Query:   82 AAVGESSDHGR-VRFDSVVQLILVPSRKDMGEDLSQELWWNQEDYLRFRLGAIVEDNAGLLRRPLRKKRSRRVPTARAGRPPCLPDPGIAQALQSRGRSGDRSGGMRP-VRQHFKFRSLPSYGSSPSLGVQPATPPPSPEKL--PCAGGATADRVSETPPAGSAPSPCPTSAERDPAEDFDGFVSLCGLPGPI 270
            AA G ++DHGR VRFD VV+LILVPSR D+   LS ELWWN++DYL+FRLGAIVE ++G+L R LR KRS+R+    A RP       IAQAL+   R     G  RP +R+ FK        SSPS  VQP TPPPSP        G   AD +     +GS+P           AE FDG V L  LPG +
Sbjct:  134 AAGGPAADHGRAVRFDRVVKLILVPSRLDLSAGLSDELWWNEDDYLQFRLGAIVEGSSGVLGRTLRNKRSKRIQPPAAARP-TYQHGKIAQALE---RMDGHGGSTRPPIRRQFKVH----LSSSPSFRVQPVTPPPSPANANETSIGRGVADEMDHPDASGSSPRRKGHKGWTF-AEGFDGLVGLGLLPGSV 317
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10841.778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQG4_ECTSI9.460e-3247.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10841contigL-elsbetiae_contig10841:3065..4339 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10841.778.1mRNA_L-elsbetiae_contig10841.778.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10841 3064..4420 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10841.778.1 ID=prot_L-elsbetiae_contig10841.778.1|Name=mRNA_L-elsbetiae_contig10841.778.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=277bp
MSTMSENWRCTNYPPRISHRSSPIRLDAPGSEDPNSNRPPFGSRSPVPSR
QTATRPSSTLLLLPGRPGVRWRGSRPAAAAAAAVGESSDHGRVRFDSVVQ
LILVPSRKDMGEDLSQELWWNQEDYLRFRLGAIVEDNAGLLRRPLRKKRS
RRVPTARAGRPPCLPDPGIAQALQSRGRSGDRSGGMRPVRQHFKFRSLPS
YGSSPSLGVQPATPPPSPEKLPCAGGATADRVSETPPAGSAPSPCPTSAE
RDPAEDFDGFVSLCGLPGPIATALEC*
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