prot_L-elsbetiae_contig1082.764.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1082.764.1
Unique Nameprot_L-elsbetiae_contig1082.764.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length178
Homology
BLAST of mRNA_L-elsbetiae_contig1082.764.1 vs. uniprot
Match: A0A6H5K1C9_9PHAE (Ribosomal_L18A domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1C9_9PHAE)

HSP 1 Score: 349 bits (895), Expect = 3.940e-121
Identity = 168/177 (94.92%), Postives = 174/177 (98.31%), Query Frame = 0
Query:    1 MVAMRQYQVVGRKAVTEKEPNPSVYRMKVFAPNEVTGASQFWYLMHQMRKMKKTTGEILDIVELTEKNARIVKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVAAKDTKRPDIQQFHNANIKFPLTHRLPRAPKKKFRTTFKASRPTTFLG 177
            MV MRQYQVVGRKAVTEKEPNP VYRMKVFAPNEVTGASQFWYLMHQMRKMKKTTGEILDIVELTEKN+RI+KNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYS+MAGRHRCRPRSIQIIRTGIVAAKDTKRPD++QFH+A IKFPLTHRLPRAPKKKFRTTFKASRPTTFLG
Sbjct:   29 MVVMRQYQVVGRKAVTEKEPNPPVYRMKVFAPNEVTGASQFWYLMHQMRKMKKTTGEILDIVELTEKNSRIIKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSQMAGRHRCRPRSIQIIRTGIVAAKDTKRPDVKQFHSAKIKFPLTHRLPRAPKKKFRTTFKASRPTTFLG 205          
BLAST of mRNA_L-elsbetiae_contig1082.764.1 vs. uniprot
Match: A0A835YZJ5_9STRA (Ribosomal protein L18 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZJ5_9STRA)

HSP 1 Score: 295 bits (754), Expect = 1.340e-99
Identity = 141/177 (79.66%), Postives = 152/177 (85.88%), Query Frame = 0
Query:    1 MVAMRQYQVVGRKAVTEKEPNPSVYRMKVFAPNEVTGASQFWYLMHQMRKMKKTTGEILDIVELTEKNARIVKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVAAKDTKRPDIQQFHNANIKFPLTHRLPRAPKKKFRTTFKASRPTTFLG 177
            M  MRQYQVVGRKA TE +PNP  YRMKVFA  +V   S FWYL+HQMRKMKKTTGEILD+ E+ EKNARI+K+YGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVAAKDTKR  ++QF N+ IKFPL HR+PR P KKFRT FKA RP TF G
Sbjct:   32 MPPMRQYQVVGRKAPTEADPNPPAYRMKVFAATKVGAISSFWYLIHQMRKMKKTTGEILDVNEIVEKNARIIKHYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVAAKDTKRAPVKQFQNSQIKFPLAHRIPREPSKKFRTVFKAQRPNTFFG 208          
BLAST of mRNA_L-elsbetiae_contig1082.764.1 vs. uniprot
Match: A0A8D0YIJ2_PIG (60S ribosomal protein L18a n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D0YIJ2_PIG)

HSP 1 Score: 292 bits (748), Expect = 1.490e-99
Identity = 139/149 (93.29%), Postives = 146/149 (97.99%), Query Frame = 0
Query:    1 MVAMRQYQVVGRKAVTEKEPNPSVYRMKVFAPNEVTGASQFWYLMHQMRKMKKTTGEILDIVELTEKNARIVKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVAAKDTKRPDIQQFHNANIKF 149
            MVAMRQYQVVGRKA T+KEPNP+VYRMKVFAPNEVTGASQFWYLMHQMRKMKKTTGEILDI+E+TEKNARI+KNYGIWLRYDSRSGTHNMYREYRDL+LTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVAAKDTKRPD+QQFHNA I F
Sbjct:    1 MVAMRQYQVVGRKAPTDKEPNPAVYRMKVFAPNEVTGASQFWYLMHQMRKMKKTTGEILDIIEITEKNARIIKNYGIWLRYDSRSGTHNMYREYRDLSLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVAAKDTKRPDVQQFHNAKINF 149          
BLAST of mRNA_L-elsbetiae_contig1082.764.1 vs. uniprot
Match: K3WCT5_GLOUD (60S ribosomal protein L18a n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WCT5_GLOUD)

HSP 1 Score: 271 bits (693), Expect = 8.730e-91
Identity = 128/174 (73.56%), Postives = 150/174 (86.21%), Query Frame = 0
Query:    4 MRQYQVVGRKAVTEKEPNPSVYRMKVFAPNEVTGASQFWYLMHQMRKMKKTTGEILDIVELTEKNARIVKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVAAKDTKRPDIQQFHNANIKFPLTHRLPRAPKKKFRTTFKASRPTTFLG 177
            +RQ+QVVGRKA TEKEPNP  YRMK+FAPNEV   S+FWY +HQM+KMKKTTGEILD+ ELTEKN RIV NYGIW+RY+SRSGTHNMY+EYRD+TL  AV+QMYSE+AGRHR RPRSIQI+RT IVAAKDTK+ ++QQFH++ IKFPL+HR+ R   K  RT FKA+RPTTF G
Sbjct:    3 IRQFQVVGRKAPTEKEPNPPAYRMKLFAPNEVLAKSRFWYFLHQMKKMKKTTGEILDVNELTEKNKRIVNNYGIWIRYNSRSGTHNMYKEYRDVTLCKAVEQMYSELAGRHRARPRSIQIMRTAIVAAKDTKKLNVQQFHDSKIKFPLSHRIARPSTKNQRTVFKANRPTTFRG 176          
BLAST of mRNA_L-elsbetiae_contig1082.764.1 vs. uniprot
Match: A0A8K1FN02_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FN02_PYTOL)

HSP 1 Score: 271 bits (692), Expect = 1.240e-90
Identity = 126/174 (72.41%), Postives = 150/174 (86.21%), Query Frame = 0
Query:    4 MRQYQVVGRKAVTEKEPNPSVYRMKVFAPNEVTGASQFWYLMHQMRKMKKTTGEILDIVELTEKNARIVKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVAAKDTKRPDIQQFHNANIKFPLTHRLPRAPKKKFRTTFKASRPTTFLG 177
            +RQ+QVVGRKA T+KEPNP  YRMK+FA NEV   S+FWY +HQM+KMKKTTGEILDI E+TEKN R+V NYGIW+RY+SRSGTHNMY+EYRD+TL  AV+Q+Y+E+AGRHR RPRSIQI+RT IVAAKDTK+ ++QQFH+ANIKFPL+HR+PR   K  RT FKASRP TF G
Sbjct:    3 IRQFQVVGRKAPTDKEPNPPAYRMKIFAANEVLAKSRFWYFLHQMKKMKKTTGEILDINEITEKNNRVVNNYGIWIRYNSRSGTHNMYKEYRDVTLCSAVEQLYAELAGRHRARPRSIQIMRTAIVAAKDTKKGNVQQFHDANIKFPLSHRIPRPSIKNHRTVFKASRPCTFRG 176          
BLAST of mRNA_L-elsbetiae_contig1082.764.1 vs. uniprot
Match: A0A5D6XXS3_9STRA (Ribosomal_L18A domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXS3_9STRA)

HSP 1 Score: 271 bits (694), Expect = 4.550e-90
Identity = 129/177 (72.88%), Postives = 151/177 (85.31%), Query Frame = 0
Query:    1 MVAMRQYQVVGRKAVTEKEPNPSVYRMKVFAPNEVTGASQFWYLMHQMRKMKKTTGEILDIVELTEKNARIVKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVAAKDTKRPDIQQFHNANIKFPLTHRLPRAPKKKFRTTFKASRPTTFLG 177
            M  +RQ+QVVGRKA TEKEPNP  YRMK+FAPNEV   S+FWY +HQM+KMKKTTGEILDI ELTEKN RIVKNYGIW+RY+SRSGTHNMY+EYRD+TL  AV+Q+Y+E+AGRHR RPRSIQI+RT IVAAKDTK+ ++QQFH++ IKFPL  R+PR   K  RT FKA+RPTTF G
Sbjct:   59 MNLIRQFQVVGRKAPTEKEPNPPAYRMKLFAPNEVLAKSRFWYFLHQMKKMKKTTGEILDINELTEKNKRIVKNYGIWIRYNSRSGTHNMYKEYRDVTLCSAVEQLYAELAGRHRARPRSIQIMRTAIVAAKDTKKLNVQQFHDSKIKFPLARRIPRPATKDQRTVFKANRPTTFRG 235          
BLAST of mRNA_L-elsbetiae_contig1082.764.1 vs. uniprot
Match: H3H534_PHYRM (60S ribosomal protein L18a n=3 Tax=Phytophthora TaxID=4783 RepID=H3H534_PHYRM)

HSP 1 Score: 269 bits (688), Expect = 5.040e-90
Identity = 125/174 (71.84%), Postives = 150/174 (86.21%), Query Frame = 0
Query:    4 MRQYQVVGRKAVTEKEPNPSVYRMKVFAPNEVTGASQFWYLMHQMRKMKKTTGEILDIVELTEKNARIVKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVAAKDTKRPDIQQFHNANIKFPLTHRLPRAPKKKFRTTFKASRPTTFLG 177
            +RQ+QVVGRKA TEKEPNP  YRMK+FAPN V   S+FWY +HQM+KMKKTTGEILD+ ELTEKN RIVKNYG+W+RY+SRSGTHNMY+EYRDLTL  AV+QMY+E+AGRHR RPRSIQI+RT IVAAKDT++  ++Q+H++ I FPL+HRLPRAP+K   + FKASRP TF G
Sbjct:    3 IRQFQVVGRKAPTEKEPNPPAYRMKLFAPNPVLAQSRFWYFLHQMKKMKKTTGEILDVNELTEKNRRIVKNYGVWIRYNSRSGTHNMYKEYRDLTLCKAVEQMYAELAGRHRARPRSIQIMRTAIVAAKDTQKHGLKQYHDSKISFPLSHRLPRAPEKHLNSVFKASRPCTFRG 176          
BLAST of mRNA_L-elsbetiae_contig1082.764.1 vs. uniprot
Match: M4BR55_HYAAE (60S ribosomal protein L18a n=19 Tax=Peronosporaceae TaxID=4777 RepID=M4BR55_HYAAE)

HSP 1 Score: 268 bits (686), Expect = 1.020e-89
Identity = 125/174 (71.84%), Postives = 151/174 (86.78%), Query Frame = 0
Query:    4 MRQYQVVGRKAVTEKEPNPSVYRMKVFAPNEVTGASQFWYLMHQMRKMKKTTGEILDIVELTEKNARIVKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVAAKDTKRPDIQQFHNANIKFPLTHRLPRAPKKKFRTTFKASRPTTFLG 177
            +RQ+QVVGRKA TEKEPNP  YRMK+FAPN V   S+FWY +HQM+KMKKTTGEILDI ELTEKN+R++ NYGIW+RY+SRSGTHNMY+EYRD+T+  AV+QMYSE+AGRHR RPRSIQI+RT IVAAKD+K+ ++QQFH++ I FPL+HRLPRA +K  +T FKASRP TF G
Sbjct:    3 IRQFQVVGRKAPTEKEPNPPAYRMKLFAPNPVLAQSRFWYFLHQMKKMKKTTGEILDINELTEKNSRVINNYGIWIRYNSRSGTHNMYKEYRDVTMCKAVEQMYSELAGRHRARPRSIQIMRTAIVAAKDSKKLNVQQFHDSKIAFPLSHRLPRAAEKHQKTVFKASRPCTFRG 176          
BLAST of mRNA_L-elsbetiae_contig1082.764.1 vs. uniprot
Match: A0A2D4C8D4_PYTIN (60S ribosomal protein L18a n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8D4_PYTIN)

HSP 1 Score: 275 bits (703), Expect = 1.660e-89
Identity = 128/174 (73.56%), Postives = 150/174 (86.21%), Query Frame = 0
Query:    4 MRQYQVVGRKAVTEKEPNPSVYRMKVFAPNEVTGASQFWYLMHQMRKMKKTTGEILDIVELTEKNARIVKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVAAKDTKRPDIQQFHNANIKFPLTHRLPRAPKKKFRTTFKASRPTTFLG 177
            +R +QVVGRKA T+KEPNP  YRMK+FAPN V   S+FWY +HQM+KMKKTTGEILD+ EL EKN RIVKNYGIW+RY+SRSGTHNMY+EYRDLTL GAVDQ+YSE+AGRHR RPRSIQI+RT +VAAKDTK+ ++QQFH++ IKFPL+HR+PR   K  RT FKASRPTTF G
Sbjct:  200 IRHFQVVGRKAPTDKEPNPPAYRMKLFAPNAVIAKSRFWYFLHQMKKMKKTTGEILDVNELVEKNKRIVKNYGIWIRYNSRSGTHNMYKEYRDLTLCGAVDQLYSELAGRHRARPRSIQIMRTAVVAAKDTKKANVQQFHDSKIKFPLSHRIPRPSIKNHRTVFKASRPTTFRG 373          
BLAST of mRNA_L-elsbetiae_contig1082.764.1 vs. uniprot
Match: A0A1V9Z1Q2_9STRA (60S ribosomal protein L18a n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1Q2_9STRA)

HSP 1 Score: 264 bits (675), Expect = 4.980e-88
Identity = 125/175 (71.43%), Postives = 148/175 (84.57%), Query Frame = 0
Query:    1 MVAMRQYQVVGRKAVTEKEPNPSVYRMKVFAPNEVTGASQFWYLMHQMRKMKKTTGEILDIVELTEKNARIVKNYGIWLRYDSRSGTHNMYREYRDLTLTGAVDQMYSEMAGRHRCRPRSIQIIRTGIVAAKDTKRPDIQQFHNANIKFPLTHRLPRAPKKKFRTTFKASRPTTF 175
            M A+ QYQVVGRKA TE +PNP  +RMK+FAPNEV   S+FWY +HQM+KMKKTTGEIL I EL EKN RIVKNYGIW+RY+SRSGTHNMY+EYR +TL GAV+QMY+E+AGRHR RPRSIQI+RT I+AAKD K+P+  Q+H++NIKFPL+HR+PR   K  RT FKASRPTTF
Sbjct:    1 MPAIHQYQVVGRKAPTETDPNPPAFRMKLFAPNEVLAKSRFWYFLHQMKKMKKTTGEILQINELREKNKRIVKNYGIWIRYNSRSGTHNMYKEYRGVTLCGAVEQMYAELAGRHRARPRSIQIMRTAILAAKDCKKPNTLQYHDSNIKFPLSHRVPRPATKNQRTVFKASRPTTF 175          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1082.764.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1C9_9PHAE3.940e-12194.92Ribosomal_L18A domain-containing protein n=2 Tax=E... [more]
A0A835YZJ5_9STRA1.340e-9979.66Ribosomal protein L18 n=1 Tax=Tribonema minus TaxI... [more]
A0A8D0YIJ2_PIG1.490e-9993.2960S ribosomal protein L18a n=1 Tax=Sus scrofa TaxI... [more]
K3WCT5_GLOUD8.730e-9173.5660S ribosomal protein L18a n=1 Tax=Globisporangium... [more]
A0A8K1FN02_PYTOL1.240e-9072.41Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XXS3_9STRA4.550e-9072.88Ribosomal_L18A domain-containing protein n=1 Tax=P... [more]
H3H534_PHYRM5.040e-9071.8460S ribosomal protein L18a n=3 Tax=Phytophthora Ta... [more]
M4BR55_HYAAE1.020e-8971.8460S ribosomal protein L18a n=19 Tax=Peronosporacea... [more]
A0A2D4C8D4_PYTIN1.660e-8973.5660S ribosomal protein L18a n=1 Tax=Pythium insidio... [more]
A0A1V9Z1Q2_9STRA4.980e-8871.4360S ribosomal protein L18a n=1 Tax=Achlya hypogyna... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023573Ribosomal protein 50S-L18Ae/60S-L20/60S-L18APFAMPF01775Ribosomal_L18Acoord: 4..125
e-value: 1.4E-51
score: 173.6
IPR02113860S ribosomal protein L18a/ L20, eukaryotesPIRSFPIRSF002190Ribosomal_L18acoord: 1..176
e-value: 5.6E-71
score: 235.5
NoneNo IPR availableGENE3D3.10.20.10coord: 1..69
e-value: 5.7E-28
score: 98.5
NoneNo IPR availableGENE3D3.10.20.10coord: 71..145
e-value: 2.1E-37
score: 129.2
NoneNo IPR availablePANTHERPTHR10052:SF160S RIBOSOMAL PROTEIN L18Acoord: 4..176
NoneNo IPR availableSUPERFAMILY160374RplX-likecoord: 71..144
IPR02887750S ribosomal protein L18Ae/60S ribosomal protein L20 and L18aPANTHERPTHR1005260S RIBOSOMAL PROTEIN L18Acoord: 4..176
IPR02887750S ribosomal protein L18Ae/60S ribosomal protein L20 and L18aHAMAPMF_00273Ribosomal_L18Aecoord: 4..67
score: 17.958

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1082contigL-elsbetiae_contig1082:8707..12335 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1082.764.1mRNA_L-elsbetiae_contig1082.764.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1082 8705..12981 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1082.764.1 ID=prot_L-elsbetiae_contig1082.764.1|Name=mRNA_L-elsbetiae_contig1082.764.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=178bp
MVAMRQYQVVGRKAVTEKEPNPSVYRMKVFAPNEVTGASQFWYLMHQMRK
MKKTTGEILDIVELTEKNARIVKNYGIWLRYDSRSGTHNMYREYRDLTLT
GAVDQMYSEMAGRHRCRPRSIQIIRTGIVAAKDTKRPDIQQFHNANIKFP
LTHRLPRAPKKKFRTTFKASRPTTFLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023573Ribosomal_L18a//L18Ae/LX
IPR021138Ribosomal_L18a/L20_eukaryotes
IPR02887750S_L18Ae/Ribosomal_L18a/L20