prot_L-elsbetiae_contig10798.743.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10798.743.1
Unique Nameprot_L-elsbetiae_contig10798.743.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length334
Homology
BLAST of mRNA_L-elsbetiae_contig10798.743.1 vs. uniprot
Match: D7FHY7_ECTSI (General transcription factor IIH subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY7_ECTSI)

HSP 1 Score: 597 bits (1540), Expect = 1.600e-211
Identity = 302/336 (89.88%), Postives = 312/336 (92.86%), Query Frame = 0
Query:    1 QTHARKHPQLVSLRVLLVSDGGQEYRLNPPFRENLQRALCASDKTPWQGDVPLSADRSPPTVAKIERQMHSQWQDVLYFLVGSDEEGRSIPPARVVKFMEESGLMRPVRGGGALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSSPAG--GGGSGGVGQRQPQPAGTLAIGKKGDDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVIRRRTPVVPENIADQV 334
            + HA    +LVSLRVLL S GGQEY+LNPPFRENLQRALCASDKTPWQGDVPLSADRSPPTVAKIERQMHSQWQDVLYFLVGSDEEGRS PPARVVKFMEESGLMRPVRG GALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRD+LLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFV+LGLLFKRKAKSTRFYPTSIAVNLIFGSSP+G  GG      QR+PQPA      K+ DDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKAL+TGIKGRQVLDFLKWHAHPV+RRRTPVVPENIADQV
Sbjct:   99 RVHAASVRKLVSLRVLLPSAGGQEYQLNPPFRENLQRALCASDKTPWQGDVPLSADRSPPTVAKIERQMHSQWQDVLYFLVGSDEEGRSTPPARVVKFMEESGLMRPVRGRGALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDELLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVELGLLFKRKAKSTRFYPTSIAVNLIFGSSPSGDAGGAXXXXTQRKPQPAXXXXXXKREDDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALSTGIKGRQVLDFLKWHAHPVVRRRTPVVPENIADQV 434          
BLAST of mRNA_L-elsbetiae_contig10798.743.1 vs. uniprot
Match: A0A6H5KJZ4_9PHAE (General transcription factor IIH subunit 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJZ4_9PHAE)

HSP 1 Score: 414 bits (1063), Expect = 5.890e-141
Identity = 216/289 (74.74%), Postives = 224/289 (77.51%), Query Frame = 0
Query:    1 QTHARKHPQLVSLRVLLVSDGGQEYRLNPPFRENLQRALCASDKTPWQGDVPLSADRSPPTVAKIERQMHSQWQDVLYFLVGSDEEGRSIPPARVVKFMEESGLMRPVRGGGALRITDKG------------------------------------------------YEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSSPAG--GGGSGGVGQRQPQPAGTLAI 239
            + HA    +LVSLRVLL S  GQEY+LNPPFRENLQRALCASDKTPWQGDVPLSADRSPPTVAKIERQMHSQWQDVLYFLVGSDEEGRS PPARVVKFMEESGLMRPVRGGGALRITDKG                                                YEFMLKEAHVQAWMVVHALINGYGRTQPGCRD+LLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFV+LGLLFKRKAKSTRFYPTSIAVNLIFGSSP+G  GG  GG  QR+PQPAG L +
Sbjct:   99 RVHAASVRKLVSLRVLLPSADGQEYQLNPPFRENLQRALCASDKTPWQGDVPLSADRSPPTVAKIERQMHSQWQDVLYFLVGSDEEGRSTPPARVVKFMEESGLMRPVRGGGALRITDKGQEEAWNCSRGARGGSFLCLRGGVGRGGARVLSTSSMLEGAVYPRRTGLYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDELLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVELGLLFKRKAKSTRFYPTSIAVNLIFGSSPSGDAGGAGGGGAQRKPQPAGGLGV 387          
BLAST of mRNA_L-elsbetiae_contig10798.743.1 vs. uniprot
Match: A0A836C856_9STRA (General transcription factor IIH subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C856_9STRA)

HSP 1 Score: 276 bits (707), Expect = 4.210e-86
Identity = 172/385 (44.68%), Postives = 217/385 (56.36%), Query Frame = 0
Query:    9 QLVSLRVLL-------VSDGGQEYR-----LNPPFRENLQRALCASDKTPWQGD--VPLSADRSPPTVAKIERQMHSQWQDVLYFLVGSDEEGRSIPPARVVKFMEESGLMRPVRGGGALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYC------------------------------------------KVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSSPAGGGGSGGVGQRQPQPAGTLAIGKKGD---DTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVIRRRTPVVPENIADQV 334
            QL +LRVL+        +   Q+ R     LNPPFR+NL +AL   D  PW+ D    L  D+  P+ AKIE +M  +W+ VL+FLV SD  G    P+ V  FM+++GLM        L IT++GYEFML++ HVQAWM V +LI     +    RDDLL+FLF LSYC                                          KV + YPL ALT  Q  LA+DF+DLGLL++RK  S RFY T IAVNL+FG++ A            P  A   A            + IIVETNFQV+AYT S LH AML+LFLELRA LPN ++G ITRES+R+AL TGIK  Q+L+FLKWHAHP +  R P++PENIADQ+
Sbjct:   48 QLSALRVLVRAQELSGAAAAAQQQRRGMIALNPPFRKNLLQALLTPDVAPWKDDPRFALRPDKLTPSRAKIEGEMRRKWEAVLHFLVASDGAGAGPTPS-VRAFMQQAGLMARRGRSEQLVITNRGYEFMLRDIHVQAWMFVLSLIRSKS-SDAQARDDLLSFLFMLSYCTVSAALQPLEGHHNAQSVCAAPSLSCKPLPAAPSASVNRCSEKVCEDYPLLALTPAQAQLARDFIDLGLLYQRKPSSQRFYTTEIAVNLVFGAAAA----------EHPSRAVIQAADASAQLDLAPRMTIIVETNFQVVAYTTSDLHVAMLTLFLELRARLPNMVIGVITRESVRQALVTGIKASQILNFLKWHAHPNVINRRPMIPENIADQI 420          
BLAST of mRNA_L-elsbetiae_contig10798.743.1 vs. uniprot
Match: A0A024TBA0_9STRA (General transcription factor IIH subunit 4 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TBA0_9STRA)

HSP 1 Score: 254 bits (649), Expect = 1.190e-77
Identity = 148/337 (43.92%), Postives = 207/337 (61.42%), Query Frame = 0
Query:    9 QLVSLRVLLVSDGGQEYRLNPPFRENLQRALCASDKTPWQ-GDVPLSADRSPPTVAKIERQMHSQWQDVLYFLVGSDEEGRSIPPARVVKFMEESGLMRPVRGGG-ALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGS----SPAGGGGSGGVGQ-----RQPQPAGTLAIGKKGDDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVIRRRTPVVPENIADQV 334
            +L  LRVL V  G  +Y LNP F+E L++AL +   +PW+ G   L A++  P V ++E     +W  VL+F+VGS     + PPA V+  +E + LM+P +    AL ITD GYEFMLK+ H Q W+ V   +    R      D++L FLFQ+SYC++ + Y +  LT+ Q+ L  D V+LGLL++R AK+TRFY TS+AVNLIFG     + A    S G+         P  +   +      D+S+ I+VETNF+V AYT+S LH AMLS+F+++ A LPN  VG +TRES+R AL+ GI   Q+ DFL  HAHP +   +PV+PENIADQ+
Sbjct:   74 KLRHLRVLRVVQGSLDYVLNPVFQEQLKKALSSLGGSPWEAGRSKLPAEKPIPAV-ELELYARKRWDSVLHFMVGSTAV--AAPPATVIGILEHTKLMQPSKSDSRALHITDTGYEFMLKDIHAQTWIFVLEYMKDIDRKGILPADEMLQFLFQMSYCRMNEYYAVADLTRNQQQLLGDLVELGLLYRRGAKATRFYTTSLAVNLIFGGMLGQTRANMTMSQGLDHITNYAADPSKSRLPSASPARADSSLLIVVETNFKVYAYTQSSLHIAMLSVFVDIVARLPNLAVGFLTRESIRSALSNGISAEQIYDFLMQHAHPKMLGNSPVIPENIADQL 407          
BLAST of mRNA_L-elsbetiae_contig10798.743.1 vs. uniprot
Match: W4FDT1_9STRA (General transcription factor IIH subunit 4 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FDT1_9STRA)

HSP 1 Score: 252 bits (643), Expect = 9.090e-77
Identity = 143/339 (42.18%), Postives = 200/339 (59.00%), Query Frame = 0
Query:    9 QLVSLRVLLVSDGGQEYRLNPPFRENLQRALCASDKTPWQGDVPLSADRSPPTVAKIERQMHSQWQDVLYFLVGSDEEGRSIPPARVVKFMEESGLMRPVRGGG-ALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSSPAGGGGSGGVGQ------------RQPQPAGTLAIGKKGDDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVIRRRTPVVPENIADQV 334
            +L  LRVL ++ G  EY LNP F++ L++AL +   +PW+          P   A++E+    +W  VL+F+VGS     + PP  V+  +E +GLM+P +    AL ITD GYEFMLK+ H Q W+ V   +    R      +++L FLFQ+SYC++ + Y +  LT+ Q+ L  D V+LGLL++R AK+TRFY TS+AVNLIFG        S  + Q              P P    A      D  + I+VETNF+V AYT+S LH AMLS+F+++ A LPN  VG +TRES+R AL+ GI   Q+ DFL  HAHP +   +PV+PENIADQ+
Sbjct:   74 KLRHLRVLRMAHGTAEYVLNPVFQDQLKKALSSLGGSPWEAGRHKLPSEKPIAAAELEQYARKRWDAVLHFMVGSTAV--AAPPPTVIGILEHTGLMQPSKTDARALHITDTGYEFMLKDIHAQTWIFVLEYMKDIDRKGILSAEEMLQFLFQMSYCRMNEYYAVADLTRHQQQLLGDLVELGLLYRRGAKATRFYTTSLAVNLIFGGMLGQTRSSITMSQGLDHLHRPSKSPHLPPPTAAAA------DAHLLIVVETNFKVYAYTQSSLHIAMLSVFVDIVARLPNLAVGFLTRESIRSALSNGISAEQIYDFLMQHAHPKMLGNSPVIPENIADQL 404          
BLAST of mRNA_L-elsbetiae_contig10798.743.1 vs. uniprot
Match: A0A485KU14_9STRA (General transcription factor IIH subunit 4 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KU14_9STRA)

HSP 1 Score: 244 bits (623), Expect = 9.220e-74
Identity = 144/352 (40.91%), Postives = 197/352 (55.97%), Query Frame = 0
Query:    9 QLVSLRVLLVSDGGQEYRLNPPFRENLQRALCASDKTPWQGDVPLSADRSPPTVAKIERQMHSQWQDVLYFLVGSDEEGRSIPPARVVKFMEESGLMRPVRGGG-ALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSSPAGGGGSGGVGQRQ-------------------------PQPAGTLAIGKKGDDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVIRRRTPVVPENIADQV 334
            +L  LRVL V  G +E+ LNP F+E L++AL +   +PW+      A   P +   +E+    +W  VL+F+VGS       PP  V+  +E + LM+P      AL ITD GYEFMLK+ H Q W+ V   I    R      +++L FLFQ+SYC++ + Y +G LT+ Q+ L  D V+LGLLF++  K+TRFY TS+AVNLIFG         G +GQ +                         P+P    A         + I+VETNF+V AYT S LH AMLS+F+++ A LPN  VG +TRES+R AL  GI   Q+ DFL  HAHP +   +PV+PENIADQ+
Sbjct:   74 KLSHLRVLRVVKGQREFVLNPVFQEQLKKALSSLGGSPWEAGRQKLAAEPPISALDLEQYARKRWDAVLHFMVGSTAV--PAPPPTVIGILEHTRLMQPSSSDARALHITDTGYEFMLKDVHAQTWIFVLEYIKDIDRRGILSAEEMLQFLFQMSYCRMNEYYAIGDLTRNQQQLLGDLVELGLLFRKGTKATRFYTTSLAVNLIFG---------GVLGQTRTSISMVQSLEQVHSASGQQLTKGAVPRPVAVAA--------HLLIVVETNFKVYAYTESTLHIAMLSVFVDIVARLPNLAVGYLTRESIRSALIHGISAEQIYDFLMQHAHPKMLANSPVIPENIADQL 406          
BLAST of mRNA_L-elsbetiae_contig10798.743.1 vs. uniprot
Match: A0A5D6Y7M4_9STRA (General transcription factor IIH subunit 4 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7M4_9STRA)

HSP 1 Score: 244 bits (622), Expect = 1.560e-73
Identity = 142/342 (41.52%), Postives = 203/342 (59.36%), Query Frame = 0
Query:    9 QLVSLRVLL-VSDGGQEYRLNPPFRENLQRALCASDKTPWQ-GDVPL--SADRSPPTVAKIERQMHSQWQDVLYFLVGSDEEGRSIPPARVVKFMEESGLMRPVRGGGALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSSPAG------------GGGSGGVGQRQPQPAGTLAIGKKGDDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVIRRRTPVVPENIADQV 334
            +L  LRV    +  G   +L+P F+  L+RAL +   +PW+ G + L  + D +  +  ++ER   S+W  VL+F+VGS       PP  VV+ +  + LM+      A  ITD GYEFMLK+ HVQ W+ +   I     +    ++D+L FLFQ+SYC+  + Y  G LT+TQ+ L  DF+D GLL++++  S RFY TS+AVNLIFG S               G  SG   Q  P+ A +L +G +     + I+VETNF++ AYT S LH AMLS+F+++ A LPN  +G ITRES+R AL  GI  +Q+ DFL  H HP +R+ TP++PENIADQ+
Sbjct:   75 KLERLRVFQPAAAAGDAVQLHPAFQRQLRRALSSLGGSPWESGRLALGKALDGAALSALELERYARSRWDSVLHFMVGSTAVKE--PPQSVVEILLRTKLMQQSADKRAYHITDTGYEFMLKDIHVQMWIFMLEYIKTLDNSGALKQEDILQFLFQISYCQTNEFYATGDLTKTQQLLLGDFIDFGLLYRKRTSSDRFYTTSLAVNLIFGGSTGQKRSLMSLTSSFTGVRSGVHSQADPRSAPSLDVGSE-----LLIVVETNFKIYAYTNSTLHVAMLSVFVDIVARLPNMAIGFITRESLRSALIHGISAQQIYDFLMKHVHPKMRQNTPIIPENIADQI 409          
BLAST of mRNA_L-elsbetiae_contig10798.743.1 vs. uniprot
Match: A0A3M6VGH3_9STRA (General transcription factor IIH subunit 4 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VGH3_9STRA)

HSP 1 Score: 243 bits (621), Expect = 2.370e-73
Identity = 147/348 (42.24%), Postives = 202/348 (58.05%), Query Frame = 0
Query:    1 QTHARKHPQLVSLRVLLVSDGGQEYRLNPPFRENLQRALCASDKTPWQ-GDVPLSAD-RSPPTVAKIERQMHSQWQDVLYFLVGSDEEGRSIPPARVVKFMEESGLMRPVRGGG-ALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSSPAG-----------GGGSGGVGQRQPQPAGTLAIGKKGDDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVIRRRTPVVPENIADQV 334
            Q H   H +L  LRV L  DG   YR +P F++ L  AL     +PW+ G + L  D  +  T A +ER   ++W  VL+++VGS       PP  VV  +  + L++       AL ITD GYEFMLK+ HVQ W+ +   I     T    ++D+L FLFQ+SYC+ G+ Y +  LT+TQR L  DF+D GLL++++  S RFY TS+AVNLIFG S               G   G+  +   P  T A+ +      + ++VETNF++ AYT S LH AMLS+F+++ A LPN  +G ITRES+R AL  GI  +Q+ DFL  HAHP +R  TPV+PENIADQ+
Sbjct:   72 QFHVALH-KLKGLRVFLQQDGS--YRSHPIFQKQLMYALSNLGGSPWESGRLCLPKDLENMFTTADLERYARARWDAVLHYMVGSTAVQE--PPQSVVDILIRTKLLQASGADSRALHITDTGYEFMLKDIHVQMWIFLLEYIRTLDNTGTLKQEDILQFLFQISYCQTGEYYAVADLTETQRLLLGDFIDFGLLYRKRTNSDRFYTTSLAVNLIFGGSTGQKRNHVSLSSSFAGVRAGMKSQMANPRQTPALDR---GAQLLVVVETNFKIYAYTTSTLHVAMLSVFVDIVARLPNLAIGFITRESLRSALIHGISAQQIYDFLIKHAHPKMRHNTPVIPENIADQI 411          
BLAST of mRNA_L-elsbetiae_contig10798.743.1 vs. uniprot
Match: A0A0P1AW06_PLAHL (General transcription factor IIH subunit 4 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AW06_PLAHL)

HSP 1 Score: 242 bits (617), Expect = 1.030e-72
Identity = 148/348 (42.53%), Postives = 202/348 (58.05%), Query Frame = 0
Query:    1 QTHARKHPQLVSLRVLLVSDGGQEYRLNPPFRENLQRALCASDKTPWQ-GDVPLSADRSPPTVAK-IERQMHSQWQDVLYFLVGSDEEGRSIPPARVVKFMEESGLMRPVRGGG-ALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSSPAG-----------GGGSGGVGQRQPQPAGTLAIGKKGDDTSIHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVIRRRTPVVPENIADQV 334
            Q +A  H +L  LRV +  +GG  YR +P F++ L  AL     +PW+ G + L  D      AK +ER   ++W  VL+++VGS       PP  VV  +  + L++       AL ITD GYEFMLK+ HVQ W  +   I     T    ++D+L FLFQLSYC+ G  Y +  LTQTQ+ L  DF+D GLLF++++ S RFY TS+AVNLIFG S               G   GV  +   P  T  +     +  + ++VETNF++ AYT S LH AMLS+F+++ A LPN  +G ITRES+R AL  GI  +Q+ DFL  HAHP +R+ TP+VPENIADQ+
Sbjct:   72 QFNAALH-KLDGLRVFIQENGG--YRPHPLFQKQLMYALSNLGGSPWERGRLRLPKDPENTFAAKDLERYARARWDSVLHYMVGSTAVQE--PPQSVVDILLRTKLLQSSEADSRALHITDTGYEFMLKDIHVQMWTFMLEYIRTLDNTGTLKQEDILQFLFQLSYCQTGGYYAVADLTQTQQLLLGDFIDFGLLFRKRSNSDRFYTTSLAVNLIFGGSKGQERSHVRLTSSFAGVRAGVKSQVTNPRLTPVL---DHEAQLLVVVETNFKIYAYTSSTLHVAMLSVFVDIVARLPNLAIGFITRESLRSALIHGISAQQIYDFLVKHAHPKMRQNTPIVPENIADQI 411          
BLAST of mRNA_L-elsbetiae_contig10798.743.1 vs. uniprot
Match: A0A6G0WGX7_9STRA (General transcription factor IIH subunit 4 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WGX7_9STRA)

HSP 1 Score: 239 bits (611), Expect = 5.370e-72
Identity = 140/343 (40.82%), Postives = 192/343 (55.98%), Query Frame = 0
Query:    9 QLVSLRVLLVSDGGQEYRLNPPFRENLQRALCASDKTPWQGDVPLSADRSPPTVAKIERQMHSQWQDVLYFLVGSDEEGRSIPPARVVKFMEESGLMRPVRGGG-ALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGCRDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKSTRFYPTSIAVNLIFGSSPAGGGGSGGVGQRQP------------QPAGTLAIGKKGDDTS----IHIIVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALATGIKGRQVLDFLKWHAHPVIRRRTPVVPENIADQV 334
            +L  LRVL    G  ++ LNP F+E L+ AL +   +PW+          P   A +E+    +W  VL+F+VGS       PP  V+  +E + LM+P      AL ITD GYEFMLK+ H Q W+ V   I    R      D++L F FQ+SYC++ + Y +  LT+ Q+ L  D V LGLL+++ +K+TRFY TS+AVNLIFG            GQ +             Q A +  + +    TS    + I+VETNF+V AYT S LH AMLS+F+++ A LPN  VG +TRES+R AL  GI   Q+ DFL  HAHP +   +PV+PENIADQ+
Sbjct:   73 KLCHLRVLRPVQGTNKFGLNPAFQEKLKTALSSLGGSPWEAGRKNLPPEKPIAAADLEQYARKRWDAVLHFMVGSTAV--PAPPKEVIGILEHTRLMKPSETDARALHITDTGYEFMLKDIHAQTWIFVLNYIKDIDRKGILSADEMLQFFFQMSYCRMNEYYAVADLTRHQQQLLGDLVQLGLLYRKDSKATRFYTTSLAVNLIFGGM---------AGQTRTNITMVQSLEAVHQQASSQVVPRPFASTSSASHLLIVVETNFKVYAYTESTLHIAMLSVFVDIVARLPNLAVGYLTRESIRSALIHGISAEQIYDFLMQHAHPKMLANSPVIPENIADQL 404          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10798.743.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHY7_ECTSI1.600e-21189.88General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A6H5KJZ4_9PHAE5.890e-14174.74General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A836C856_9STRA4.210e-8644.68General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A024TBA0_9STRA1.190e-7743.92General transcription factor IIH subunit 4 n=2 Tax... [more]
W4FDT1_9STRA9.090e-7742.18General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A485KU14_9STRA9.220e-7440.91General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A5D6Y7M4_9STRA1.560e-7341.52General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A3M6VGH3_9STRA2.370e-7342.24General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A0P1AW06_PLAHL1.030e-7242.53General transcription factor IIH subunit 4 n=1 Tax... [more]
A0A6G0WGX7_9STRA5.370e-7240.82General transcription factor IIH subunit 4 n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004598Transcription factor TFIIH subunit p52/Tfb2PFAMPF03849Tfb2coord: 5..317
e-value: 3.3E-82
score: 276.3
IPR004598Transcription factor TFIIH subunit p52/Tfb2PANTHERPTHR13152TFIIH, POLYPEPTIDE 4coord: 5..334

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10798contigL-elsbetiae_contig10798:1234..6257 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10798.743.1mRNA_L-elsbetiae_contig10798.743.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10798 1234..6257 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10798.743.1 ID=prot_L-elsbetiae_contig10798.743.1|Name=mRNA_L-elsbetiae_contig10798.743.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=334bp
QTHARKHPQLVSLRVLLVSDGGQEYRLNPPFRENLQRALCASDKTPWQGD
VPLSADRSPPTVAKIERQMHSQWQDVLYFLVGSDEEGRSIPPARVVKFME
ESGLMRPVRGGGALRITDKGYEFMLKEAHVQAWMVVHALINGYGRTQPGC
RDDLLAFLFQLSYCKVGDAYPLGALTQTQRDLAQDFVDLGLLFKRKAKST
RFYPTSIAVNLIFGSSPAGGGGSGGVGQRQPQPAGTLAIGKKGDDTSIHI
IVETNFQVIAYTRSKLHFAMLSLFLELRALLPNAIVGAITRESMRKALAT
GIKGRQVLDFLKWHAHPVIRRRTPVVPENIADQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004598TFIIH_p52/Tfb2