prot_L-elsbetiae_contig10789.732.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10789.732.1
Unique Nameprot_L-elsbetiae_contig10789.732.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length191
Homology
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BLAST of mRNA_L-elsbetiae_contig10789.732.1 vs. uniprot
Match: D7FMV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV6_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 1.540e-19
Identity = 48/60 (80.00%), Postives = 52/60 (86.67%), Query Frame = 0 
Query:  117 MVMNTTRTKRGVAGRPKSKNGVGKKVRRILEPASREETAYEEKKDKVAAMNWVNLGKSGG 176
            M MNTTR KRG AGR +SK GV KK RRILEPASREETAYEEKK+KV++MNW NLGKSGG
Sbjct:    1 MTMNTTRAKRGAAGRGRSKTGVSKKARRILEPASREETAYEEKKEKVSSMNWGNLGKSGG 60
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10789.732.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMV6_ECTSI1.540e-1980.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 23..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 35..52
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 53..191
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10789contigL-elsbetiae_contig10789:2031..3660 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10789.732.1mRNA_L-elsbetiae_contig10789.732.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10789 2030..3660 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10789.732.1 ID=prot_L-elsbetiae_contig10789.732.1|Name=mRNA_L-elsbetiae_contig10789.732.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=191bp
EKRRSRQRRLTMARPRPERSVRFILSLLACCCCAHGRCQASSSGPAHVTA
VAQGTLTRQQHRQHAPHQQQALGRSSSSGTCFIPGGLSSPRAGAGRIRRS
GGRSDGGHRRSNSGRSMVMNTTRTKRGVAGRPKSKNGVGKKVRRILEPAS
REETAYEEKKDKVAAMNWVNLGKSGGGGGGGSGGKRGKAGR
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