prot_L-elsbetiae_contig10757.700.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10757.700.1
Unique Nameprot_L-elsbetiae_contig10757.700.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length121
Homology
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BLAST of mRNA_L-elsbetiae_contig10757.700.1 vs. uniprot
Match: D7FLL4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLL4_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 1.400e-38
Identity = 81/121 (66.94%), Postives = 92/121 (76.03%), Query Frame = 0 
Query:    1 FDETLSTESPNLQPVHTHSKRLKKKAAGPKKRRSKEVKMWFREDEFGRVVAKGVVGEDDPLD----DRHNVEPEAEEESKAKAAQLEGATTNRYGRVVVPRVALPTPKGKGKARDGAGGEA 117
            +DETLS +SPNLQPVHTHSKRLKKK    KK+R+KEVK W REDEFG +VA+G+VGEDDP D    DR   E E E E + K   +EGATTNRYGRVVVPRV L TPKGKGKA+D  G +A
Sbjct:   65 YDETLSRDSPNLQPVHTHSKRLKKKP-DRKKKRAKEVKEWIREDEFGNIVARGIVGEDDPYDPKVFDRKKAEVEGEAE-ETKPVPVEGATTNRYGRVVVPRVNLTTPKGKGKAKDPNGDDA 183
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BLAST of mRNA_L-elsbetiae_contig10757.700.1 vs. uniprot
Match: A0A6H5KNH9_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH9_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 1.170e-18
Identity = 49/81 (60.49%), Postives = 56/81 (69.14%), Query Frame = 0 
Query:   29 PKKRRSKEVKMWFREDEFGRVVAKGVVGEDDPLD----DRHNVEPEAEEESKAKAAQLEGATTNRYGRVVVPRVALPTPKG 105
            P+ +  +EVK W REDEFG +VA+G+VGEDDP D    DR   E E E E K     +EGATTNRYGRVVVPRV L TPKG
Sbjct:  210 PELQAMEEVKEWIREDEFGNIVARGIVGEDDPYDPKVFDRKKAEVEGEAEEK-NPVPVEGATTNRYGRVVVPRVNLATPKG 289
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10757.700.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLL4_ECTSI1.400e-3866.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KNH9_9PHAE1.170e-1860.49PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10757contigL-elsbetiae_contig10757:1429..3562 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10757.700.1mRNA_L-elsbetiae_contig10757.700.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10757 1429..3564 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10757.700.1 ID=prot_L-elsbetiae_contig10757.700.1|Name=mRNA_L-elsbetiae_contig10757.700.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=121bp
FDETLSTESPNLQPVHTHSKRLKKKAAGPKKRRSKEVKMWFREDEFGRVV
AKGVVGEDDPLDDRHNVEPEAEEESKAKAAQLEGATTNRYGRVVVPRVAL
PTPKGKGKARDGAGGEAGESE
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