prot_L-elsbetiae_contig1069.648.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1069.648.1
Unique Nameprot_L-elsbetiae_contig1069.648.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length516
Homology
BLAST of mRNA_L-elsbetiae_contig1069.648.1 vs. uniprot
Match: A0A6H5KW91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW91_9PHAE)

HSP 1 Score: 348 bits (894), Expect = 2.660e-112
Identity = 183/300 (61.00%), Postives = 214/300 (71.33%), Query Frame = 0
Query:  217 TFSKAXXXXXXXXXXXXXXXSFSSFCERPFPFTNESALPCVELPTGEDRQNGVGAFYDEEGCALEQQSRSIVGCNLGGVANCRLCVFNRALFSQEILGGEEVPFVNCPCCVPDTYQMGGDIDCDFLFSSAPVSAXXXXXXXXXXXXXXXXXXPGATTAPLEAGDRAVDVGTPAPSVSPATLAPTIPPIPTEPCEIGAGGDTTGNSTVCVDVASPLDWENGIGTFYERGCAGLGCGIAGFADCRQCIFDDAAYAASGGTDALVECPCCVPITYKLRPEDSECIWPATPAPVSLAGSGASRP 516
            TFSKA   XXXXXXXXXXX  + SFCERP+PF NES + CVE+ T +DR NGVGAFYDE GCA  Q     VGC+LGGV +CRLCVF+RAL+SQ IL GEEVPFV+CPCCVP+ Y +GGDIDCDF+ S+AP+              XXX    G T++PL   +    V T AP +           I  EPCE+G  GDTTG+ST+CVD+AS LD  NGIGT+YE  C GLGC IAG  DCRQCIFD+ AYAASGGTDALVECPCCVP+ Y+LRP+ SEC WPATP P+++ GSG SRP
Sbjct:  107 TFSKAPTPXXXXXXXXXXXFPYYSFCERPYPFANESDILCVEMATDQDRANGVGAFYDELGCAGAQSGTGFVGCSLGGVPSCRLCVFHRALYSQTILNGEEVPFVDCPCCVPEVYGVGGDIDCDFVTSAAPIPVPAATPSPTMAPQXXXTMVSGVTSSPLVEDEARGGVATLAPVMXXXXXXXXXXTIAMEPCEVGVAGDTTGDSTLCVDIASTLDLANGIGTYYEANCEGLGCDIAGNVDCRQCIFDETAYAASGGTDALVECPCCVPVIYQLRPDSSECTWPATPTPITVEGSGGSRP 406          
BLAST of mRNA_L-elsbetiae_contig1069.648.1 vs. uniprot
Match: D8LN92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN92_ECTSI)

HSP 1 Score: 320 bits (821), Expect = 1.940e-103
Identity = 170/259 (65.64%), Postives = 200/259 (77.22%), Query Frame = 0
Query:  259 LPTGEDRQNGVGAFYDEEGCALEQQSRSIVGCNLGGVANCRLCVFNRALFSQEILGGEEVPFVNCPCCVPDTYQMGGDIDCDFLFSSAPVSAXXXXXXXXXXXXXXXXXXPGATTAPLEAGDRAVDVGTPAPSVSPATLAPTIPP-IPTEPCEIGAGGDTTGNSTVCVDVASPLDWENGIGTFYERGCAGLGCGIAGFADCRQCIFDDAAYAASGGTDALVECPCCVPITYKLRPEDSECIWPATPAPVSLAGSGASRP 516
            + T  DR NGVGAFYDE GCA  Q     VGC+LG V NCRLCVF+RAL+SQ IL GEEVPFV+CPCCVP+ Y++GGDIDCDF+ S+ P+     XXXXXXXXXXXXXXXPG T+AP    + +V V T A  V   T APT  P I  EPCE+G  GDTTG+ST+CVD++SP+D  NGIGT+YE  C GLGC IAG  DCRQCIFD+ AYAASGGTDALVECPCCVP++Y+LRP+ SEC WPATP+P+++ GSG SRP
Sbjct:    1 MATDADRANGVGAFYDELGCAGAQSGTGFVGCSLGDVPNCRLCVFHRALYSQNILEGEEVPFVDCPCCVPEVYEVGGDIDCDFVASAPPIPVPAAXXXXXXXXXXXXXXXPGVTSAPPAEDEASVGVATLA-XVMAVTPAPTAAPVIAMEPCEVGVAGDTTGDSTLCVDISSPVDLANGIGTYYEANCEGLGCDIAGNEDCRQCIFDETAYAASGGTDALVECPCCVPVSYQLRPDSSECTWPATPSPINVEGSGGSRP 258          
BLAST of mRNA_L-elsbetiae_contig1069.648.1 vs. uniprot
Match: D8LDL0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDL0_ECTSI)

HSP 1 Score: 312 bits (800), Expect = 8.460e-100
Identity = 153/266 (57.52%), Postives = 185/266 (69.55%), Query Frame = 0
Query:  242 CERPFPFTNESALPCVELPTGEDRQNGVGAFYDEEGCALEQQSRSIVGCNLGGVANCRLCVFNRALFSQEILGGEEVPFVNCPCCVPDTYQMGGDIDCDFLFSSAPVSAXXXXXXXXXXXXXXXXXXPGATTAPLEAGDRAVDVGTPAPSVSPATLAPTIPPIPTEPCEIGAGGDTTGNSTVCVDVASPLDWENGIGTFYERGCAGLGCGIAGFADCRQCIFDDAAYAASGGTDALVECPCCVPITYKLRPEDSECIWPATPAPVS 507
            CERP+ ++NES +PCV++ T  D+ +G GAFYDEEGC  + +S S+VGC  GGV NCRLCVFNR LFS+ ILGGEEVPFV+CPCCVPDTY+MGGDIDC+F +SS PVSA             XXXXX G T +                     TLAPTI   P EPCE  AGG+++  + +CVD+AS +DW++GIGT+YE GC G+GC IAG  DCRQC+FD  AYA SGG   L  CPCCVPITYKLRPE SEC+WP TP+P +
Sbjct:   39 CERPYTWSNESEIPCVDMVTAVDKASGAGAFYDEEGCGPDAESISVVGCAHGGVGNCRLCVFNRGLFSETILGGEEVPFVDCPCCVPDTYEMGGDIDCEFAYSSPPVSAPTPVSVEGNASTPXXXXXEGDTNS---------------------TLAPTI---PMEPCETSAGGNSS--ALLCVDIASAVDWDDGIGTYYESGCQGVGCDIAGHVDCRQCVFDSEAYATSGGNLELAACPCCVPITYKLRPEGSECVWPPTPSPTA 278          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1069.648.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KW91_9PHAE2.660e-11261.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN92_ECTSI1.940e-10365.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LDL0_ECTSI8.460e-10057.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 136..516
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 111..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..135
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..110
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1069contigL-elsbetiae_contig1069:19286..25533 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1069.648.1mRNA_L-elsbetiae_contig1069.648.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1069 19286..25533 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1069.648.1 ID=prot_L-elsbetiae_contig1069.648.1|Name=mRNA_L-elsbetiae_contig1069.648.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=516bp
ERTADRKWRSTPPEHAVLHFIMCLSRFEILDIRLSSASWITSGRDAAATT
GASFLRSILTGAMVDCSTVRKTGQGTTLLFLLHEHPRESSLFLLLPPASQ
SALLASVLLLTMRRQQLLCGLLSLSLCVLGAVGQTNPAPVRPLPTPEPTP
GPTKEPTPGPTPGPTEAPTPGPTNTPTEAPTIGPTEEPTPSPTPAPTLAP
TPSPTPAPTLSPTPGPTFSKAPTPPPTPSPTPPPTFSFSSFCERPFPFTN
ESALPCVELPTGEDRQNGVGAFYDEEGCALEQQSRSIVGCNLGGVANCRL
CVFNRALFSQEILGGEEVPFVNCPCCVPDTYQMGGDIDCDFLFSSAPVSA
PPPTPSPTGAPLAEPTVAPGATTAPLEAGDRAVDVGTPAPSVSPATLAPT
IPPIPTEPCEIGAGGDTTGNSTVCVDVASPLDWENGIGTFYERGCAGLGC
GIAGFADCRQCIFDDAAYAASGGTDALVECPCCVPITYKLRPEDSECIWP
ATPAPVSLAGSGASRP
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