prot_L-elsbetiae_contig10676.637.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10676.637.1
Unique Nameprot_L-elsbetiae_contig10676.637.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length41
Homology
BLAST of mRNA_L-elsbetiae_contig10676.637.1 vs. uniprot
Match: A0A6H5L2Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Y8_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 5.640e-20
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 0
Query:    1 LLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILGKPPAL 40
            LLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILG+PP L
Sbjct:   97 LLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILGRPPVL 136          
BLAST of mRNA_L-elsbetiae_contig10676.637.1 vs. uniprot
Match: D7FKC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKC7_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 4.170e-18
Identity = 38/40 (95.00%), Postives = 39/40 (97.50%), Query Frame = 0
Query:    1 LLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILGKPPAL 40
            LLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILG+PP L
Sbjct: 1605 LLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILGRPPVL 1644          
BLAST of mRNA_L-elsbetiae_contig10676.637.1 vs. uniprot
Match: A0A7S1XKF3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKF3_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.580e-11
Identity = 27/37 (72.97%), Postives = 31/37 (83.78%), Query Frame = 0
Query:    1 LLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILGKP 37
            L R  GT+N+ EPYVYT PRADTVLH GDRVF+LG+P
Sbjct:   53 LYRTAGTKNSVEPYVYTAPRADTVLHEGDRVFVLGEP 89          
BLAST of mRNA_L-elsbetiae_contig10676.637.1 vs. uniprot
Match: H3HCD7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCD7_PHYRM)

HSP 1 Score: 48.9 bits (115), Expect = 1.740e-5
Identity = 21/35 (60.00%), Postives = 29/35 (82.86%), Query Frame = 0
Query:    1 LLRARGTRN-APEPYVYTGPRADTVLHPGDRVFIL 34
            LLRA+G R  AP PYVYT P +DT+++PGD++F+L
Sbjct: 2532 LLRAKGGRGGAPYPYVYTCPSSDTIVYPGDKIFVL 2566          
BLAST of mRNA_L-elsbetiae_contig10676.637.1 vs. uniprot
Match: A0A3F2RY51_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RY51_9STRA)

HSP 1 Score: 47.0 bits (110), Expect = 8.370e-5
Identity = 21/35 (60.00%), Postives = 28/35 (80.00%), Query Frame = 0
Query:    1 LLRARGTRN-APEPYVYTGPRADTVLHPGDRVFIL 34
            LLRA+G    AP PYVYT P +DTV++PGD++F+L
Sbjct:  928 LLRAKGEAGGAPFPYVYTCPSSDTVVYPGDKIFVL 962          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10676.637.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L2Y8_9PHAE5.640e-2095.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKC7_ECTSI4.170e-1895.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1XKF3_9STRA1.580e-1172.97Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
H3HCD7_PHYRM1.740e-560.00Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A3F2RY51_9STRA8.370e-560.00Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10676contigL-elsbetiae_contig10676:1975..2097 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10676.637.1mRNA_L-elsbetiae_contig10676.637.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10676 1975..2097 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10676.637.1 ID=prot_L-elsbetiae_contig10676.637.1|Name=mRNA_L-elsbetiae_contig10676.637.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=41bp
LLRARGTRNAPEPYVYTGPRADTVLHPGDRVFILGKPPAL*
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