prot_L-elsbetiae_contig10432.434.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10432.434.1
Unique Nameprot_L-elsbetiae_contig10432.434.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length333
Homology
BLAST of mRNA_L-elsbetiae_contig10432.434.1 vs. uniprot
Match: D7G049_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G049_ECTSI)

HSP 1 Score: 181 bits (458), Expect = 4.900e-48
Identity = 163/385 (42.34%), Postives = 199/385 (51.69%), Query Frame = 0
Query:   15 EVQIGKPSYAQVCELEAVLVNGVDFTCLAAFQPARDLGSFAGPEGLRKMLAAVSPVSLCEGVRQED-----------AGPSAVAGSPDFWA------------------CVRGPTDGGPAVSAKLGLVGGDAVCWSSKCSRVFAA--AAAANSSEKENARGAARRCKECASYLDSVLLPRVREASAXXXXXXXXXXXXN--------------DK----RGVRESQAGTKRITHGLRVSSTAAAAADKTRQQPG----LDEGRRGNSPQA---------ATTGTKREET----FAE-DTRLAIGAVSICQKTGVTVWRADDGSARKRFKKRACSVPAPESSSARRHAHGDGGDDLQGGLGLSTLRTIPRHRWALKNSERSKRLAC 332
            EV I KPSYAQVCE+  V VNGVD T  AAF+P  D+GSF+ P GL KMLAAVS VSLCEG R++            A P+ +AG   F +                   V   T+ GP VSAKLG+ GG+AV WSSKCSRV  A  AAA N  +++   GAARRC EC+  L S LLPRV E +    XXXXXXXXX               DK    + + ES+ G +R +H         A  D  R QP      DE RR  S Q          A+TG   + T    FA+ D++      S+C         A++GSARKRFK  ACS  + + SSAR H  G  GD +   LGLSTLR +P HRWAL +S     + C
Sbjct:  307 EVHITKPSYAQVCEVAGVRVNGVDCTSFAAFKPTLDVGSFSNPAGLCKMLAAVSSVSLCEGFRKQHRTQDVDVTTAPATPAPMAGMAGFSSLDGQAGVTVGCNSSSSLRAVGDGTNEGPLVSAKLGVAGGNAVLWSSKCSRVLPARVAAAMNPPKEQKLEGAARRCSECSKLLLSGLLPRVTEGAGGAAXXXXXXXXXXXXXXXXXXXXXXXXDKEEKLQEIHESEEGAERRSH---------ATVDSIRPQPSPAPCSDEQRREGSSQTLGVVLKRDVASTGGLDQATEDIGFAKPDSKGTRTTSSLC---------AEEGSARKRFKT-ACSEFSLDHSSARWHYPGRDGDVMVAALGLSTLRMMPPHRWALTSSGPGDNVGC 672          
BLAST of mRNA_L-elsbetiae_contig10432.434.1 vs. uniprot
Match: A0A6H5JH41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH41_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 1.540e-27
Identity = 82/180 (45.56%), Postives = 99/180 (55.00%), Query Frame = 0
Query:   15 EVQIGKPSYAQVCELEAVLVNGVDFTCLAAFQPARDLGSFAGPEGLRKMLAAVSPVSLCEGVRQE----------------------------DAGPSAVAGSPDFWACVRGPTDGGPAVSAKLGLVGGDAVCWSSKCSRVFAA--AAAANSSEKENARGAARRCKECASYLDSVLLPRV 164
            EV+I KPSYAQVCE+  + VNGVD T  AAF+PA D+GSF+ P GL KMLAAVS VSLCEG +++                             AG +           VR   + GP VSAKL + G +A  WS KCSRV  A  AAA NS +++   GA RRC EC+  L S L PRV
Sbjct:  349 EVKITKPSYAQVCEVAGIRVNGVDCTSFAAFKPALDVGSFSDPAGLCKMLAAVSSVSLCEGFQKQHRKQDVDVTATPAPXXXXXXXXGFSLDRQAGGTVSCNPSSSLRAVREGRNEGPLVSAKLVVAGSNAFLWSIKCSRVLPARVAAATNSPKEQKIEGAPRRCSECSKLLLSGLPPRV 528          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10432.434.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G049_ECTSI4.900e-4842.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JH41_9PHAE1.540e-2745.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10432contigL-elsbetiae_contig10432:3134..6933 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10432.434.1mRNA_L-elsbetiae_contig10432.434.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10432 1419..6949 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10432.434.1 ID=prot_L-elsbetiae_contig10432.434.1|Name=mRNA_L-elsbetiae_contig10432.434.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=333bp
MFLFTTEWQHQPSREVQIGKPSYAQVCELEAVLVNGVDFTCLAAFQPARD
LGSFAGPEGLRKMLAAVSPVSLCEGVRQEDAGPSAVAGSPDFWACVRGPT
DGGPAVSAKLGLVGGDAVCWSSKCSRVFAAAAAANSSEKENARGAARRCK
ECASYLDSVLLPRVREASAAAAAAATGGSGGNDKRGVRESQAGTKRITHG
LRVSSTAAAAADKTRQQPGLDEGRRGNSPQAATTGTKREETFAEDTRLAI
GAVSICQKTGVTVWRADDGSARKRFKKRACSVPAPESSSARRHAHGDGGD
DLQGGLGLSTLRTIPRHRWALKNSERSKRLAC*
back to top