prot_L-elsbetiae_contig10429.429.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10429.429.1
Unique Nameprot_L-elsbetiae_contig10429.429.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length237
Homology
BLAST of mRNA_L-elsbetiae_contig10429.429.1 vs. uniprot
Match: D7G9G4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G4_ECTSI)

HSP 1 Score: 360 bits (923), Expect = 7.560e-124
Identity = 182/207 (87.92%), Postives = 191/207 (92.27%), Query Frame = 0
Query:   29 QPSLAADFMATEFVDFVDSRGLFGCRIPKNFLRAERPKDKRGTVFVAGDYSKAEVISVQVVTTFDLLTDAGLPTIGDLTTWENVGKPTAVADLLKQRRDSDAAGGGQVESVVLPGATVDGDVLHFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRGDGSFLVLWAGALNTDWEQEGGAKERLEVAADSFRLEGLVVDGVRLGA 235
            QPS AA+  ATEFVDF DSRGLF CRIPKNFLRAER KDKRGTVFVAGDYSKAEV+SVQVV TFDLLTDAGLPTIGDLT WENVGKP A+ADLLKQRRDSDAAGG  VESVVLPG T+DGDVL F LKSPIKVMR DLLEKEQGVSELYRNTYVKAIMRGDGSFLV+WAGALNTDW+QEGGAK+RL+VA DSFRLEGL+VDGVRLGA
Sbjct:   32 QPSSAAEVAATEFVDFEDSRGLFSCRIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKTFDLLTDAGLPTIGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPGVTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWDQEGGAKDRLKVATDSFRLEGLIVDGVRLGA 238          
BLAST of mRNA_L-elsbetiae_contig10429.429.1 vs. uniprot
Match: A0A6H5KHB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHB6_9PHAE)

HSP 1 Score: 351 bits (901), Expect = 1.560e-119
Identity = 177/206 (85.92%), Postives = 188/206 (91.26%), Query Frame = 0
Query:   30 PSLAADFMATEFVDFVDSRGLFGCRIPKNFLRAERPKDKRGTVFVAGDYSKAEVISVQVVTTFDLLTDAGLPTIGDLTTWENVGKPTAVADLLKQRRDSDAAGGGQVESVVLPGATVDGDVLHFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRGDGSFLVLWAGALNTDWEQEGGAKERLEVAADSFRLEGLVVDGVRLGA 235
            PS AA+  ATEFVDF DSRGLF C IPKNFLRAER KDKRGTVFVAGDYSKAEV+SVQVV  FDLLTDAGLPT+GDLT WENVGKP A+ADLLKQRRDSDAAGG  VESVVLPG T+DGDVL F LKSPIKVMR DLLEKEQGVSELYRNTYVKAIMRGDGSFLV+WAGALNTDW+QEGGAK+RL+VA DSFRLEGL+V+GVRLGA
Sbjct:   97 PSSAAEVAATEFVDFEDSRGLFSCLIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKAFDLLTDAGLPTVGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPGVTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWDQEGGAKDRLKVATDSFRLEGLIVEGVRLGA 302          
BLAST of mRNA_L-elsbetiae_contig10429.429.1 vs. uniprot
Match: A0A835Z4Q3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Q3_9STRA)

HSP 1 Score: 166 bits (419), Expect = 1.580e-47
Identity = 107/228 (46.93%), Postives = 135/228 (59.21%), Query Frame = 0
Query:    8 RRAVAISVAAATGGVAA----SSALQPSLAADFMATEFVDFVDSRGLFGCRIPKNFLRAERPKDK--RGTVFVAGDYSKAEVISVQVVTTFDLLTDAG-----LPTIGDLTTWENVGKPTAVADLLKQRRDSDAAGGGQVESVVLPGATV-DGDVLHFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRGDGSFLVLWAGALNTDWEQEGGAKERLEVAADSFRL 223
            RR  A   A+A  GV      + A  PSLAA         + DSRG F   +P N++RAER  D+  +G +FV G+Y KA  +SV ++ +  LL DAG     LPT  DLTTW  VG P  +A LL  RRD DAA     +S VLP   V DG+ L F +K+ + V R DLLEKE+GV ELYR TY KA+MRGDG+FL+ WAGALNT+W +   A++ L     SF L
Sbjct:   11 RRRFAAGTASAIAGVLLLPQPTVAEVPSLAA---------YSDSRGYFEISLPANWVRAERKGDQEAKGVLFVTGNYVKAITLSVAIIKSSQLLRDAGTAPLVLPT-DDLTTWAGVGTPMGIAKLLAFRRDQDAAQAAAQDSEVLPDTVVLDGNALTFMIKTRVPVQRPDLLEKERGVRELYRLTYGKALMRGDGTFLLCWAGALNTEWGEPTNARDTLAAVVASFHL 228          
BLAST of mRNA_L-elsbetiae_contig10429.429.1 vs. uniprot
Match: A0A7S0QY41_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QY41_9CRYP)

HSP 1 Score: 126 bits (317), Expect = 3.690e-32
Identity = 78/177 (44.07%), Postives = 101/177 (57.06%), Query Frame = 0
Query:   34 ADFMATEFVDFVDSRGL---FGCRIPKNFLRAERPKDKRGTVFVAGDYSKAEVISVQVVTTFDLLTDAGLPTIGDLTTWENVGKPTAVADLLKQRRDSDAAGGGQVESVVLPGAT-VDGDVLHFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRGDGSFLVLWAGALNTDWEQ 206
            AD    E+  F +  GL   F   IPK F +++RP    GT+FVAG    AE++SVQ+V+   LL D G+   GDL+TWE +G   A+ADLL   RD DA   G + S V P +  V G  L F   + I V R D L + QG+SEL R T  +A +R DG+ LVLWA AL  DW +
Sbjct:   63 ADAEVYEYSAFKEDGGLDAVFRADIPKEFFKSKRPLTN-GTIFVAGSLQTAEIVSVQIVSIPQLLADIGVLPTGDLSTWEAIGSAKAIADLLTSNRDGDAKQRGGLASKVDPASVAVSGRTLSFRTAATIAVQRPDKLLETQGISELRRITRARAEIRRDGTALVLWASALEQDWNK 238          
BLAST of mRNA_L-elsbetiae_contig10429.429.1 vs. uniprot
Match: K0RXZ5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RXZ5_THAOC)

HSP 1 Score: 117 bits (292), Expect = 4.240e-28
Identity = 92/232 (39.66%), Postives = 123/232 (53.02%), Query Frame = 0
Query:    8 RRAVAISVAAATGGVAASSALQPSLAADFMATEFVDFVDSRGLFGCRIPKNFLRAER------PKDKRG------TVFVAGDYSKAEVISVQVVTTFDLLTDAGLPTIGDLTTWENVGKPTAVADLLKQRRDSDAAGGGQV-----ESVVLPGATVDGDVLHFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRG-DGSFLVLWAGALNTDWEQEGGAKERLEVAADSF 221
            RRA+  S  +A   VAAS AL    A D     FVD  +   LF   +P+ F    R      P +K G      T+F AGD SKAEV++V+      LL + G   +GDL+T+E +G PTA+A LL +RR+ D  G   V     +SVV+   T DG  L FT+K  I V + +LL +E GVS L+R T  KA +   DG+ LV++A AL+ D+    G   R  V  DSF
Sbjct:   44 RRAMVASTLSAAVSVAASKALAEE-ATDVPMKLFVDTANP-SLFAINVPQRFFAIRRSAKGDLPDEKTGKGRRGGTIFSAGDMSKAEVVAVERFPVKVLLEEEGYSPLGDLSTFEAIGDPTAIATLLLRRREKDRPGNVSVAVLDKDSVVV---TEDGKTLKFTMKQEISVQKPELLMEEMGVSRLFRTTVAKATLSSNDGNLLVVFASALDQDFSGPDGVALRKTV--DSF 268          
BLAST of mRNA_L-elsbetiae_contig10429.429.1 vs. uniprot
Match: A0A7S2MYB7_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MYB7_9EUKA)

HSP 1 Score: 77.8 bits (190), Expect = 1.320e-13
Identity = 63/200 (31.50%), Postives = 98/200 (49.00%), Query Frame = 0
Query:   45 VDSRGLFGCRIPKNFLRAERPKDKRGTVFVAGDYSKAEVISVQVVTTFDLLTD-------AGLP---TIGDLTT---WENVGKPTAVADLLKQRRDSDAAGGGQVESVVLPGATVDGDVLHFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMR----GDGS----FLVLWAGALNTDWEQEGGAKERLEVAADSFRL 223
            +D+   F   IP +F+ ++R K   GT+FVAG++ +A VISV       LL D        GLP    I +  T   + ++G   +VA LL + RD DA+ G    ++ L   + DG  L F   + + V   D LE+++GV +L R T   +++     GDG+       +W  AL  DW+++   K  LE    SF +
Sbjct:   45 LDAASRFALDIPDDFVVSKR-KAVTGTLFVAGNFPRASVISVTAWPLDALLQDDARSRALPGLPQELVIAEHATPLSFTDIGSAKSVAQLLLRARDRDASSGALQSALTLSQLSSDGSRLEFECATELPVSDPDALEEQRGVRQLIRRTRAASVLGSVPGGDGAPVPALFSVWGSALEQDWDKD--LKAPLEKTVSSFSV 241          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10429.429.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G9G4_ECTSI7.560e-12487.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KHB6_9PHAE1.560e-11985.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z4Q3_9STRA1.580e-4746.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0QY41_9CRYP3.690e-3244.07Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
K0RXZ5_THAOC4.240e-2839.66Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2MYB7_9EUKA1.320e-1331.50Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..236
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10429contigL-elsbetiae_contig10429:741..2702 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10429.429.1mRNA_L-elsbetiae_contig10429.429.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10429 2..3100 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10429.429.1 ID=prot_L-elsbetiae_contig10429.429.1|Name=mRNA_L-elsbetiae_contig10429.429.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=237bp
MDRAKFLRRAVAISVAAATGGVAASSALQPSLAADFMATEFVDFVDSRGL
FGCRIPKNFLRAERPKDKRGTVFVAGDYSKAEVISVQVVTTFDLLTDAGL
PTIGDLTTWENVGKPTAVADLLKQRRDSDAAGGGQVESVVLPGATVDGDV
LHFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRGDGSFLVLWAGAL
NTDWEQEGGAKERLEVAADSFRLEGLVVDGVRLGAA*
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