prot_L-elsbetiae_contig10415.421.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10415.421.1
Unique Nameprot_L-elsbetiae_contig10415.421.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length381
Homology
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BLAST of mRNA_L-elsbetiae_contig10415.421.1 vs. uniprot
Match: A0A6H5JDM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDM8_9PHAE)

HSP 1 Score: 405 bits (1041), Expect = 4.760e-137
Identity = 259/400 (64.75%), Postives = 286/400 (71.50%), Query Frame = 0 
Query:    1 MIAATRYPAFSRNFEDEQDYADAAVSAARKANPLPSGLSLAPILRWKRRERQRQ-------DSSSKKFKCKTLVVGFEGGGASFAQKCFGL-AEDADWIGTVVLPGAPSSRSTDATSTTGGLGDSLNPADPLNSACNIFLKR------------VGEGSGGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSTPSPNPDATDSNREDGGVAVALCGYRVPPRQAGAWAKALLGAIDAEVVVVLATVAAEPGRSEGWPGARLVATAEAEEREDCLKMSEGFQPLRTPTMLSGAPAALVSYCQRHGRAAMCFAAAELPGRRAVPXXXXXXXXXXXXXXXXXXSLLFAERSLSCTRKPIGVVAGEAMVSGGGGGVEGVDKQVDAVDSATSSLYI 380
            MIAATRYPAFSRNFEDEQDYADAAVSAARKAN LPSG+ LAPILRWKRR+           ++SS K KCKTLVVGFEGGGASFAQKCFGL AE+ADWIGTVVLPGAP S + DA STTGG+GDSL+P DPLNSACNIF K              GEG G A+              XXXXXXXXXXXXXXXXXXXXXX      + D  + +  D  V V LCGYRVPPRQA +WAKALLG I+AEVVV L TV AEPGRSEGW GARL+ATAEAEEREDCLKMS GFQPLRTPTMLSGAPAALVSYCQRHG+AAMCFAAAE PGRR                      L  A+R+LSC R+ +G+VAG A+V  GG    G  K++ A++ A SSLY+
Sbjct:    1 MIAATRYPAFSRNFEDEQDYADAAVSAARKANSLPSGVKLAPILRWKRRQXXXXXXXXXXGEASSHKVKCKTLVVGFEGGGASFAQKCFGLTAEEADWIGTVVLPGAPCSGA-DAASTTGGIGDSLDPTDPLNSACNIFRKTWAGKDNRGWNCDKGEGCGEAEPLSNGSNANGNPPGXXXXXXXXXXXXXXXXXXXXXXXXXXVASKDFHEGSGSD--VLVVLCGYRVPPRQADSWAKALLGGIEAEVVVALTTVEAEPGRSEGWRGARLLATAEAEEREDCLKMSVGFQPLRTPTMLSGAPAALVSYCQRHGQAAMCFAAAESPGRRVTALPQQVRQQLGVDGGGGGGRLALAQRNLSCAREALGIVAGAAVVVSGGEETGG--KEMGALEDAPSSLYV 395
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10415.421.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JDM8_9PHAE4.760e-13764.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10415contigL-elsbetiae_contig10415:2447..5081 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10415.421.1mRNA_L-elsbetiae_contig10415.421.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10415 2244..5530 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10415.421.1 ID=prot_L-elsbetiae_contig10415.421.1|Name=mRNA_L-elsbetiae_contig10415.421.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=381bp
MIAATRYPAFSRNFEDEQDYADAAVSAARKANPLPSGLSLAPILRWKRRE
RQRQDSSSKKFKCKTLVVGFEGGGASFAQKCFGLAEDADWIGTVVLPGAP
SSRSTDATSTTGGLGDSLNPADPLNSACNIFLKRVGEGSGGADNNSGGDN
SSGNDERSSSDGGGGGGTVETTGGGGGGDSSTPSPNPDATDSNREDGGVA
VALCGYRVPPRQAGAWAKALLGAIDAEVVVVLATVAAEPGRSEGWPGARL
VATAEAEEREDCLKMSEGFQPLRTPTMLSGAPAALVSYCQRHGRAAMCFA
AAELPGRRAVPPQQPQQQQAGGEGGSSGGSLLFAERSLSCTRKPIGVVAG
EAMVSGGGGGVEGVDKQVDAVDSATSSLYI*
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