prot_L-elsbetiae_contig10413.419.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10413.419.1
Unique Nameprot_L-elsbetiae_contig10413.419.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length254
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig10413.419.1 vs. uniprot
Match: D7FVM5_ECTSI (Protein required for ethanol metabolism n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM5_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 2.010e-86
Identity = 160/256 (62.50%), Postives = 181/256 (70.70%), Query Frame = 0 
Query:    1 MMARRVLVLACLFLVVAPLQSVSGQDGGLAEAEKLDLDEVLDSLPDAGGGVAEGGDEEEGDSSAPAEVEEGGXQXXDE--DAGDVFEEAEDAXXXXXXXVVDKVESTGXXXXXXXXXXXXXXXXXXGFFKPLFGKRAKTGNKRCSWSWKERRCQPAALCQYKYQASFFLDATIGESCRLADHKLTRRVFENSDVQVKPAVALAGAAGLFSADLVAIRYTNWLERFPLLFNVAQGFVLLFSGDTLFQVLEQGWQKAV 254
            MMARRVLVLAC FL VAPLQSVSGQ+GG+AEAE++DLDE+LD+L DA   V E G+    DS+A AE   G   XX    D   VFEEAE  X      V   V S+                   GFFKPLF KR KTGN  CSWSWKE+RC+PA+LCQYKYQ   FLDAT+ ESCR AD K+T+  FE +DVQVKPAVAL GAAGLF+ADL AIRYT+WL+R+PLLFNV QGFVLL SGDTLFQVLEQGWQK +
Sbjct:    1 MMARRVLVLACFFLAVAPLQSVSGQEGGVAEAEQIDLDELLDTLVDAE--VIEEGE----DSAAAAEAATGDDAXXXXVPDXXAVFEEAEXXXAELEEDVAADVGSS-----------KSAGGGSSGFFKPLFKKRPKTGNALCSWSWKEKRCEPASLCQYKYQ---FLDATVSESCRQADFKVTKAAFEQADVQVKPAVALVGAAGLFAADLAAIRYTDWLKRYPLLFNVVQGFVLLASGDTLFQVLEQGWQKVI 236
[Close]
BLAST of mRNA_L-elsbetiae_contig10413.419.1 vs. uniprot
Match: A0A836CEJ0_9STRA (Protein required for ethanol metabolism n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEJ0_9STRA)

HSP 1 Score: 108 bits (270), Expect = 7.940e-24
Identity = 56/114 (49.12%), Postives = 69/114 (60.53%), Query Frame = 0 
Query:  141 RCSWSWKERRCQPAALCQYKYQASFFLDATIGESCRLADHKLTRRVFENSDVQVKPAVALAGAAGLFSADLVAIRYTNWLERFPLLFNVAQGFVLLFSGDTLFQVLEQGWQKAV 254
            +C +SW  +RC+P A C+YKYQ   FLDAT  ESCR       +    +S   V PA A+ GA  LF+ADL  I  T  L++ PLL NV QGF L  SGDT FQV+EQGW   +
Sbjct:  125 QCKFSWASKRCEPRAYCEYKYQ---FLDATPSESCRRKGVLKAKHAL-HSGALVSPAAAVGGATALFAADLAVIATTPALKKAPLLTNVVQGFALFLSGDTYFQVIEQGWASKI 234
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10413.419.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FVM5_ECTSI2.010e-8662.50Protein required for ethanol metabolism n=1 Tax=Ec... [more]
A0A836CEJ0_9STRA7.940e-2449.12Protein required for ethanol metabolism n=1 Tax=Tr... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..254
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.876

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10413contigL-elsbetiae_contig10413:1219..6768 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10413.419.1mRNA_L-elsbetiae_contig10413.419.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10413 1219..6768 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10413.419.1 ID=prot_L-elsbetiae_contig10413.419.1|Name=mRNA_L-elsbetiae_contig10413.419.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=254bp
MMARRVLVLACLFLVVAPLQSVSGQDGGLAEAEKLDLDEVLDSLPDAGGG
VAEGGDEEEGDSSAPAEVEEGGDQDEDEDAGDVFEEAEDAADEAAADVVD
KVESTGGGGDGGGSGGDGGGSGGGGFFKPLFGKRAKTGNKRCSWSWKERR
CQPAALCQYKYQASFFLDATIGESCRLADHKLTRRVFENSDVQVKPAVAL
AGAAGLFSADLVAIRYTNWLERFPLLFNVAQGFVLLFSGDTLFQVLEQGW
QKAV
back to top