prot_L-elsbetiae_contig10413.418.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10413.418.1
Unique Nameprot_L-elsbetiae_contig10413.418.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length185
Homology
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BLAST of mRNA_L-elsbetiae_contig10413.418.1 vs. uniprot
Match: D7FVM6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM6_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 1.450e-61
Identity = 110/192 (57.29%), Postives = 131/192 (68.23%), Query Frame = 0 
Query:   11 IILLWFGSANAFSLPSAA---PGETIFCQHRLVEHTDQLRQRRYDHDEHDERS-LIPPPHLFCIPAPGGDICLVVDEKGAYHAVRDSCPPLGVPLSQTAVVDSQVNAIGDTLFGTRFHLKDGTVRGPWCPGGGTAGPLLLQLARHRRYP-------------RLARFLLALSQRTAGRRSWREAHHLPPSPP 185
            ++LLW G A AFS  +AA      T F QH LVE TDQL + +      +E S  +PPPHLF IPAPGGD+CLVVDEK  Y+A+RD  PP GVP+SQT VVDSQV+AIGD+LFGTRF+LKDGTVRGPWCPGGGTAGPLLL+LARHRR+              RL   L ++S++   R SW   +  PPS P
Sbjct:   32 VLLLWIGGAYAFSAAAAAGPAAATTEFFQHTLVESTDQLDKLQQPRHHGNECSGPVPPPHLFRIPAPGGDVCLVVDEKKNYYAMRDCFPPFGVPVSQTGVVDSQVDAIGDSLFGTRFNLKDGTVRGPWCPGGGTAGPLLLRLARHRRHRLFNQCIGVARSINRLTHHLFSISKQRRARGSW-ATYFRPPSSP 222
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BLAST of mRNA_L-elsbetiae_contig10413.418.1 vs. uniprot
Match: A0A6H5JUG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUG0_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 8.930e-55
Identity = 102/195 (52.31%), Postives = 119/195 (61.03%), Query Frame = 0 
Query:    9 YFIILLWFGSANAFSLPSAAPGE---TIFCQHRLVEHTDQLRQRRYDHDEHDERSL---IPPPHLFCIPAPGGDICLVVDEKGAYHAVRDSCPPLGVPLSQTAVVDSQVNAIGDTLFGTRFHLKDGTVRGPWCPGGGTAGPLLLQLARHRRYP-------------RLARFLLALSQRTAGRRSWREAHHLPPSP 184
            + I+LLW G A AFS           T F Q+ LVE TDQL                  +PPPHLF IPAPGGD+CLVVDE  +Y+A+RD  PP GVP+SQT VVDSQV+AIGD+LFGTRF+L+DGTVRGPWCPGGGTAGPLLL LARHRR+               L   L   S++   R SW  +   P SP
Sbjct:   29 FVILLLWVGGACAFSAAXXXXXXXPTTEFFQYTLVESTDQLEXXXXXXXXXXGNEWFEPVPPPHLFRIPAPGGDVCLVVDENKSYYAMRDCFPPFGVPVSQTGVVDSQVDAIGDSLFGTRFNLEDGTVRGPWCPGGGTAGPLLLWLARHRRHRLFTLRIGVARSINHLTHHLFLFSKQRRARGSWATSFRPPSSP 223
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BLAST of mRNA_L-elsbetiae_contig10413.418.1 vs. uniprot
Match: A0A836CM18_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM18_9STRA)

HSP 1 Score: 103 bits (256), Expect = 3.340e-22
Identity = 55/120 (45.83%), Postives = 66/120 (55.00%), Query Frame = 0 
Query:   19 ANAFSLPSAAPGETIFCQHRLVEHTDQLRQRRYDHDEHDERSLIPPPHLFCIPAPGGDICLVVDEKGAYHAVRDSCPPLGVPLSQTAVVDSQVNAIGDTLFGTRFHLKDGTVRGPWCPGG 138
            A+A +L +  P +   C      H DQL                PPP +F IP   G +CLVVDE G  HA+RDSCPPLG P+S T VVDS++  I D  FGTRF+L  G  RG  CPGG
Sbjct:  641 ASAMTLSTTPPLQIKLC------HKDQLAPL----------GAPPPPLVFSIPVLCGTVCLVVDENGKSHAMRDSCPPLGSPISATGVVDSEIGVIEDLRFGTRFYLSSGAPRGRLCPGG 744
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10413.418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FVM6_ECTSI1.450e-6157.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUG0_9PHAE8.930e-5552.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CM18_9STRA3.340e-2245.83Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 58..143
e-value: 4.3E-5
score: 25.0
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 62..135
NoneNo IPR availablePANTHERPTHR21496FERREDOXIN-RELATEDcoord: 74..140
NoneNo IPR availablePANTHERPTHR21496:SF22coord: 74..140
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..185
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.872

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10413contigL-elsbetiae_contig10413:88..1062 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10413.418.1mRNA_L-elsbetiae_contig10413.418.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10413 88..1062 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10413.418.1 ID=prot_L-elsbetiae_contig10413.418.1|Name=mRNA_L-elsbetiae_contig10413.418.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=185bp
MLPSALPAYFIILLWFGSANAFSLPSAAPGETIFCQHRLVEHTDQLRQRR
YDHDEHDERSLIPPPHLFCIPAPGGDICLVVDEKGAYHAVRDSCPPLGVP
LSQTAVVDSQVNAIGDTLFGTRFHLKDGTVRGPWCPGGGTAGPLLLQLAR
HRRYPRLARFLLALSQRTAGRRSWREAHHLPPSPP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036922Rieske_2Fe-2S_sf