prot_L-elsbetiae_contig10406.412.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10406.412.1
Unique Nameprot_L-elsbetiae_contig10406.412.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length320
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig10406.412.1 vs. uniprot
Match: A0A6H5KKZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKZ7_9PHAE)

HSP 1 Score: 442 bits (1137), Expect = 1.420e-152
Identity = 228/315 (72.38%), Postives = 256/315 (81.27%), Query Frame = 0 
Query:    9 QEARDTLDLIDQLLWVLGPADSGESGFVFFDLDETLITRDTCLIDGLGSTSALIARLEAKLGTSSEALHIIRQEMERDYYSADPRLVDPLLTRVVRALKVQGHLVFGLTSNALDTVHAPQILRTLAKYKIRFSAPEVRGELPKSGAICLDHPISRGIIFADNQQAIPHDKGEIIAEYVGLLLHNARRAATEHVGAGTTXXXXXXXXXXXXXXXXXXXXXXXXRTVGALASS---RRPRKCVLVDNTSRKCKRATETFARHAALAGGGMDLHAIHYTEAENLVDSPDALRQLRIILARLRARGLIGVDLVAEDILV 320
            +EA DTLDLIDQLLW LGPADSGE+GFVFFDLDETLITRDTCL+DGLGSTSAL+ARLEAKLG SSE L +IRQEMERDYY+AD RLVDPLL RV+R+LK+QGH VFGLTSNALD VHAP+IL TLAKYKIRFSAP+VRGELP+SGA+ +DHP+SRGIIF DNQQA+ HDKGEIIAEYVGLLL          VG  T                         RT  ALA S   RRPRKCVLVDNTS+KC+RA ETFARHAA+AGGG++LH +H+TEAEN+VDSP+ALRQLR+ILARL+ RGLIGVDL+AEDILV
Sbjct:   54 REASDTLDLIDQLLWALGPADSGETGFVFFDLDETLITRDTCLVDGLGSTSALMARLEAKLGPSSETLRVIRQEMERDYYNADLRLVDPLLARVIRSLKIQGHSVFGLTSNALDPVHAPRILETLAKYKIRFSAPDVRGELPRSGALMVDHPVSRGIIFGDNQQAVSHDKGEIIAEYVGLLLXXXXXXXXXXVGEKTAGDAARGGLSEPGGVKVGDGESSGGRT--ALAGSLSPRRPRKCVLVDNTSKKCERAVETFARHAAMAGGGLELHTLHFTEAENMVDSPEALRQLRVILARLQERGLIGVDLIAEDILV 366
[Close]
BLAST of mRNA_L-elsbetiae_contig10406.412.1 vs. uniprot
Match: D8LQ97_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ97_ECTSI)

HSP 1 Score: 341 bits (874), Expect = 1.550e-114
Identity = 174/241 (72.20%), Postives = 197/241 (81.74%), Query Frame = 0 
Query:   83 MERDYYSADPRLVDPLLTRVVRALKVQGHLVFGLTSNALDTVHAPQILRTLAKYKIRFSAPEVRGELPKSGAICLDHPISRGIIFADNQQAIPHDKGEIIAEYVGLLLHNARRAATEHVGAGTTXXXXXXXXXXXXXXXXXXXXXXXXRTVGALASS---RRPRKCVLVDNTSRKCKRATETFARHAALAGGGMDLHAIHYTEAENLVDSPDALRQLRIILARLRARGLIGVDLVAEDILV 320
            MERDYY+ADP+LVDPLL RV+RALK+QGH VFGLTSNALD VHAP+IL TLAKYKIRFSAP+VRGELP+SGA+ +DHP+SRGIIF DNQQA+ HDKGEIIAEYVGLLLHNARRA +EHVGA T                         RT  ALA S   +RPRKCVLVDNTS+KC+RA ETFARHAA AGGG++LH +H+TEAEN+VDSP+ALRQLRIILARL+ RGLIGVDL+AEDILV
Sbjct:    1 MERDYYNADPKLVDPLLARVIRALKIQGHSVFGLTSNALDPVHAPRILETLAKYKIRFSAPDVRGELPRSGALMVDHPVSRGIIFGDNQQAVSHDKGEIIAEYVGLLLHNARRAVSEHVGAKTAGDAARGGLSEPGGVKVGDGESSGGRT--ALAGSLSPKRPRKCVLVDNTSKKCERAAETFARHAAAAGGGLELHTLHFTEAENMVDSPEALRQLRIILARLKERGLIGVDLIAEDILV 239
[Close]
BLAST of mRNA_L-elsbetiae_contig10406.412.1 vs. uniprot
Match: A0A835YVM2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVM2_9STRA)

HSP 1 Score: 138 bits (347), Expect = 3.530e-36
Identity = 77/145 (53.10%), Postives = 99/145 (68.28%), Query Frame = 0 
Query:   13 DTLDLIDQLLWVLGPADSGESGFVFFDLDETLITRDTCLIDGLGSTSALIARLEAKL---GTS----SEALHIIRQEMERDYYSADPRLVDPLLTRVVRALKVQGHLVFGLTSNALDTVHAPQILRTLAKYKIRFSAPEVRGELP 150
            DT DLID LL V     + +  ++FFD+DETL+TRDTCL+ G   T+ L+ RL  +L   G+S    SE +  I+ EMER+YY +D +LVDPLL R+VR LKVQGH VFGLTSN   + H+   +  LA+YKIRFS P +RGELP
Sbjct:   37 DTDDLIDMLLTV----GTAKPAWIFFDIDETLVTRDTCLVHGFQHTTYLLERLRTRLAETGSSGARASEVVRKIQAEMEREYYDSDIKLVDPLLARLVRGLKVQGHHVFGLTSNEPFSEHSITTVAALAQYKIRFSDPWIRGELP 177
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10406.412.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KKZ7_9PHAE1.420e-15272.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ97_ECTSI1.550e-11472.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YVM2_9STRA3.530e-3653.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022565Protein of unknown function DUF2608PFAMPF11019DUF2608coord: 33..148
e-value: 9.9E-6
score: 25.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10406contigL-elsbetiae_contig10406:3559..5830 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10406.412.1mRNA_L-elsbetiae_contig10406.412.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10406 3559..5830 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10406.412.1 ID=prot_L-elsbetiae_contig10406.412.1|Name=mRNA_L-elsbetiae_contig10406.412.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=320bp
MLFLSWFEQEARDTLDLIDQLLWVLGPADSGESGFVFFDLDETLITRDTC
LIDGLGSTSALIARLEAKLGTSSEALHIIRQEMERDYYSADPRLVDPLLT
RVVRALKVQGHLVFGLTSNALDTVHAPQILRTLAKYKIRFSAPEVRGELP
KSGAICLDHPISRGIIFADNQQAIPHDKGEIIAEYVGLLLHNARRAATEH
VGAGTTSSDGSSSSSSSSSSSGNSGGGGAARTVGALASSRRPRKCVLVDN
TSRKCKRATETFARHAALAGGGMDLHAIHYTEAENLVDSPDALRQLRIIL
ARLRARGLIGVDLVAEDILV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022565DUF2608